ENSG00000140374:-:15:76274411:76292700

1. Sequences

id gene transcript strand chrom startGR endGR length seq type
ENSG00000140374:-:15:76274411:76292700 ENSG00000140374 ENST00000688154 - 15 76274412 76292700 630 GUGGCACAAGAUCUCUGUAAAGUAGCAGGCAUAGCAAAAGUUCUGGUGGCUCAGCAUGAUGUGUACAAAGGCCUACUUCCAGAGGAACUGACACCAUUGAUUUUGGCAACUCAGAAGCAGUUCAAUUACACACACAUCUGUGCUGGAGCAUCUGCCUUCGGAAAGAACCUUUUGCCCAGAGUAGCAGCCAAACUUGAGGUUGCCCCGAUUUCUGACAUCAUUGCAAUCAAGUCACCUGACACAUUUGUGAGAACUAUUUAUGCAGGAAAUGCUCUAUGUACAGUGAAGUGUGAUGAGAAAGUGAAAGUGUUUUCUGUCCGUGGAACAUCCUUUGAUGCUGCAGCAACAAGUGGCGGUAGUGCCAGUUCAGAAAAGGCAUCAAGUACUUCACCAGUGGAAAUAUCAGAGUGGCUUGACCAGAAAUUAACAAAAAGUGAUCGACCAGAGCUAACAGGUGCCAAAGUGGUGGUAUCUGGUGGUCGAGGCUUGAAGAGUGGAGAGAACUUUAAGUUGUUAUAUGACUUGGCAGAUCAACUACAUGCUGCAGUUGGUGCUUCCCGUGCUGCUGUUGAUGCUGGCUUUGUUCCCAAUGACAUGCAAGUUGGACAGACGGGAAAAAUAGUAGCACCAGUGGCACAAGAUCUCUGUAAAGUAGCAGGCAUAGCAAAAGUUCUGGUGGC circ
ENSG00000140374:-:15:76274411:76292700 ENSG00000140374 ENST00000688154 - 15 76274412 76292700 22 UAGUAGCACCAGUGGCACAAGA bsj
ENSG00000140374:-:15:76274411:76292700 ENSG00000140374 ENST00000688154 - 15 76292691 76292900 210 CUCUCAGAGUGCUGGGAUUACAGGCUUGAGCCACUGCGCCCGGCCGGAAUAUAUUUUAAUUCUUAACUGGCCCUUUUGCUAAUAAGAAUAAUUUUUACAGUUGGCCAUUAAGAUUUUAUGAUCUGUUGAUAUUUAUAGUGGUGGCUUUAUUUGUAUAUUUCUGAUAGAUGGAUAAUUAGGAACUUAUCUUUUAAUCAUAGGUGGCACAAG ie_up
ENSG00000140374:-:15:76274411:76292700 ENSG00000140374 ENST00000688154 - 15 76274212 76274421 210 AGUAGCACCAGUAAGUAUUGCAAUAAAAUAUGCUGUGUAAAAUGUUAUGGGGAUAAGUACUGUAUGUAUUUGUUGAACAGUGAUCUCAGUGAUUUACCUUACUCAGUGUUCCUGAGCAGUUAGCCAGUACCAUGGUGAAUAUGUCAUUUUCACAAGGUCUGUGUAGUUCUUGAUCCUAGUAAAAUGCCCAGCAGUUCUUAAAUCCAGCUU ie_down
  • Note:
    • id: unique identifier.
    • gene: represents the gene from which the circRNA arises.
    • transcript: transcript whose exon coordinates overlap with the detected back-spliced junction coordinate and used in the downstream analysis.
    • strand: is the strand from which the gene is transcribed.
    • chrom: is the chromosome from which the circRNA is derived.
    • startGR: is the 5’ coordinate of the genomic range from which the sequence are extracted.
    • endGR: is the 3’ coordinate of the genomic range from which the sequence are extracted.
    • length: length of the extracted sequences.
    • seq: sequence used in the downstream analysis.
    • type: type of sequences retrieved. If type = “circ” the sequences derive from the internal circRNA sequences. If type = “bsj” the sequences derive from the back spliced junctions (BSJ). If type = “ie_up” the Intron or Exon sequences derive from the up-stream of BSJ up to 210 bp. If type = “ie_down” the Intron or Exon sequences derive from the down-stream of BSJ up to 210 bp.

2. RNA Binding Proteins Analysis

RBP on full sequence

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
CNOT4 1 314 0.003174603 0.0004564992 2.797892 GACAGA GACAGA
AGO1 2 548 0.004761905 0.0007956130 2.581400 GGUAGU,UGAGGU AGGUAG,GAGGUA,GGUAGU,GUAGUA,UGAGGU
RBM42 1 407 0.003174603 0.0005912752 2.424675 AACUAC AACUAA,AACUAC,ACUAAG,ACUACG
FXR1 1 411 0.003174603 0.0005970720 2.410599 AUGACA ACGACA,ACGACG,AUGACA,AUGACG
SNRNP70 5 1237 0.009523810 0.0017941145 2.408267 AAUCAA,AUCAAG,GAUCAA,GUUCAA AAUCAA,AUCAAG,AUUCAA,GAUCAA,GUUCAA,UUCAAG
RBMY1A1 1 489 0.003174603 0.0007101099 2.160462 ACAAGA ACAAGA,CAAGAC
AGO2 6 1830 0.011111111 0.0026534924 2.066039 AAAGUG,GUGCUU,UAAAGU AAAAAA,AAAGUG,AAGUGC,AGUGCU,GUGCUU,UAAAGU
EIF4B 3 1179 0.006349206 0.0017100607 1.892529 GUUGGA,UCGGAA,UUGGAC CUCGGA,CUUGGA,GUCGGA,GUUGGA,UCGGAA,UCGGAC,UUGGAA,UUGGAC
SSB 3 1260 0.006349206 0.0018274462 1.796747 GCUGUU,UGCUGU,UGUUUU CUGUUU,GCUGUU,UGCUGU,UGUUUU
ERI1 1 632 0.003174603 0.0009173461 1.791038 UUCAGA UUCAGA,UUUCAG
ZRANB2 9 3173 0.015873016 0.0045997733 1.786942 CGGUAG,GAGGUU,GGUGGU,GUAAAG,GUGGUG,UGGUGG AAAGGU,AGGGAA,AGGUAA,AGGUAC,AGGUAG,AGGUAU,AGGUCU,AGGUUA,AGGUUU,CGGUAA,CGGUAG,CGGUAU,CGGUCU,GAGGUU,GGGUAA,GGGUGA,GGUAAA,GGUGGU,GUAAAG,GUGGUG,UAAAGG,UGGUAA,UGGUGG
ACO1 3 1283 0.006349206 0.0018607779 1.770670 CAGUGA,CAGUGG CAGUGA,CAGUGC,CAGUGG,CAGUGU
SNRPB2 2 991 0.004761905 0.0014376103 1.727866 AUUGCA,UGCAGU AUUGCA,GUAUUG,UAUUGC,UGCAGU,UUGCAG
RBM24 6 2357 0.011111111 0.0034172229 1.701107 AGAGUG,AGUGUG,GAGUGG,GUGUGA AGAGUG,AGUGUG,GAGUGA,GAGUGG,GAGUGU,GUGUGA,GUGUGG,GUGUGU,UGAGUG,UGUGUG
PABPC5 6 2400 0.011111111 0.0034795387 1.675035 AGAAAA,AGAAAG,AGAAAU,GAAAGU,GAAAUU AGAAAA,AGAAAG,AGAAAU,GAAAAU,GAAAGU,GAAAUU
RBFOX1 2 1077 0.004761905 0.0015622419 1.607921 AGCAUG,GCAUGA AGCAUG,GCAUGA,GCAUGC,GCAUGU,UGACUG,UGCAUG
YBX2 3 1480 0.006349206 0.0021462711 1.564744 AACAUC,ACAUCA,ACAUCU AACAAC,AACAUC,ACAACA,ACAACG,ACAACU,ACAUCA,ACAUCG,ACAUCU
NONO 3 1498 0.006349206 0.0021723567 1.547315 AGAGGA,AGGAAC,GAGGAA AGAGGA,AGGAAC,GAGAGG,GAGGAA
RBM28 1 822 0.003174603 0.0011926949 1.412351 GAGUAG AGUAGA,AGUAGG,AGUAGU,GAGUAG,GUGUAG,UGUAGA,UGUAGG,UGUAGU
IGF2BP1 1 831 0.003174603 0.0012057377 1.396660 AGCACC AAGCAC,ACCCGU,AGCACC,CACCCG,CCCGUU,GCACCC
ZFP36L2 2 1277 0.004761905 0.0018520827 1.362390 AUUUAU,UAUUUA AUUUAU,UAUUUA,UUAUUU,UUUAUU
PUM2 3 1890 0.006349206 0.0027404447 1.212166 UGUAAA,UGUACA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
SF1 9 4931 0.015873016 0.0071474739 1.151071 ACAGAC,ACUGAC,AUUAAC,CUAACA,GCUAAC,UAACAA,UGCUGC ACAGAC,ACAGUC,ACCGAC,ACGAAC,ACUAAC,ACUAAG,ACUAAU,ACUAGC,ACUGAC,ACUUAU,AGUAAC,AGUAAG,AUACUA,AUUAAC,CACAGA,CACCGA,CACUGA,CAGUCA,CGCUGA,CUAACA,GACUAA,GCUAAC,GCUGAC,GCUGCC,UAACAA,UACGAA,UACUAA,UACUAG,UACUGA,UAGUAA,UAUACU,UGCUAA,UGCUGA,UGCUGC
NELFE 5 3028 0.009523810 0.0043896388 1.117437 CUGGCU,GCUAAC,UCUCUG,UCUGGU CUCUCU,CUCUGG,CUGGCU,CUGGUU,GCUAAC,GGCUAA,GGUCUC,GGUUAG,GUCUCU,UCUCUC,UCUCUG,UCUGGC,UCUGGU,UGGCUA,UGGUUA
HNRNPLL 6 3534 0.011111111 0.0051229360 1.116960 ACACAC,ACACCA,CACACA,CAGACG ACAAAC,ACACAC,ACACCA,ACAUAC,ACCACA,ACCGCA,ACGACA,ACUGCA,AGACGA,CAAACA,CACACA,CACACC,CACCAC,CACCGC,CACUGC,CAGACG,CAUACA,GACGAC,GCAAAC,GCACAC,GCAUAC
HNRNPDL 16 8759 0.026984127 0.0126950266 1.087848 AACCUU,ACACCA,ACCAGA,ACUUUA,AGUAGC,CACCAG,CUAACA,CUUUAA,GAACUA,GAGUAG,UAACAG,UCUGAC AACAGC,AACCUU,AACUAA,AAUACC,AAUUUA,ACACCA,ACAGCA,ACAUUA,ACCACG,ACCAGA,ACCUUG,ACUAAC,ACUAAG,ACUAGA,ACUAGC,ACUAGG,ACUGCA,ACUUUA,AGAUAU,AGUAGC,AGUAGG,AUACCA,AUCUGA,AUGCGC,AUUAGC,AUUAGG,CACCAG,CACGCA,CACUAG,CAUUAG,CCACGC,CCAGAC,CCUUGC,CCUUUA,CGAGCA,CUAACA,CUAACU,CUAAGC,CUAAGU,CUAGAG,CUAGAU,CUAGCA,CUAGCC,CUAGCG,CUAGCU,CUAGGA,CUAGGC,CUAGUA,CUUGCC,CUUUAA,CUUUAG,GAACUA,GACUAG,GAGUAG,GAUUAG,GCACUA,GCGAGC,GCUAGU,GGACUA,GGAGUA,GGAUUA,GUAGCC,GUAGCU,UAACAG,UAAGUA,UAGGCA,UCUGAC,UGCGCA,UGUCGC,UUAGCC,UUAGGC,UUUAGG
ENOX1 5 3195 0.009523810 0.0046316558 1.040011 GGACAG,GUACAG,UGGACA,UGUACA AAGACA,AAUACA,AGACAG,AGGACA,AGUACA,AUACAG,CAGACA,CAUACA,CGGACA,CGUACA,GGACAG,GUACAG,UAGACA,UAUACA,UGGACA,UGUACA

RBP on BSJ (Exon Only)

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
ACO1 1 8 0.09090909 0.0005894682 7.268867 CAGUGG CAGUGA,CAGUGC,CAGUGG
HNRNPDL 1 35 0.09090909 0.0023578727 5.268867 CACCAG AACAGC,AAUACC,AAUUUA,ACACCA,ACAGCA,ACCAGA,AGAUAU,AGUAGG,AUCUGA,AUUAGC,AUUAGG,CACGCA,CCAGAC,CUAAGC,CUAAGU,CUAGAU,CUAGGA,CUAGGC,CUUUAG,GAACUA,GAUUAG,GCACUA,GCUAGU,UGCGCA,UUAGCC,UUAGGC,UUUAGG
FMR1 1 117 0.09090909 0.0077285827 3.556149 AGUGGC AAAAAA,AAGGAA,AAGGAU,AAGGGA,ACUGGG,ACUGGU,AGCAGC,AGCGAA,AGGAAG,AGGAAU,AGGAGG,AGGAGU,AGGAUG,AGGAUU,AGGCAC,AGGGAG,AGUGGC,AUGGAG,CAGCUG,CUAUGG,CUGAGG,CUGGGC,CUGGUG,GAAGGA,GAAGGG,GACAAG,GACAGG,GAGGAU,GCAGCU,GCAUAG,GCGAAG,GCUAAG,GCUGAG,GCUGGG,GGACAA,GGACAG,GGCAUA,GGCUGA,GGCUGG,GGGCAU,GGGCUA,GGGCUG,GUGCGA,GUGGCU,UAAGGA,UAGUGG,UAUGGA,UGACAA,UGACAG,UGAGGA,UGCGGC,UGGAGU,UGGCUG
SRSF2 3 479 0.18181818 0.0314383023 2.531901 ACCAGU,CAGUGG,CCAGUG AAAAGA,AAAGAG,AAGAGA,AAGCAG,AAGCUG,AAGGCG,AAUACC,AAUGCU,ACCACC,ACCACU,ACCAGC,ACCAGU,ACCCCC,ACCCCU,ACUCAA,AGAAGA,AGAAGC,AGAAUA,AGAAUG,AGAGAA,AGAGAU,AGAGGA,AGAGGU,AGAGUA,AGAGUG,AGAGUU,AGAUAA,AGAUCC,AGAUGC,AGCACU,AGCAGA,AGCAGU,AGCCGA,AGCCUC,AGCGGA,AGCUGU,AGGAAG,AGGAGA,AGGAGC,AGGAGG,AGGAGU,AGGCAG,AGGCGU,AGGCUG,AGGGUA,AGUAGG,AGUAGU,AGUGAC,AGUGUU,AUGAUG,AUGCUG,AUGGAG,AUUAGU,AUUCCU,AUUGAU,CAGAGA,CAGAGG,CAGAGU,CAGUAG,CAGUGG,CCACCA,CCAGAU,CCAGCC,CCAGCU,CCAGGG,CCAGGU,CCAGUC,CCAGUG,CCAGUU,CCCGCU,CCCGUG,CCGCUA,CCGGUG,CCUCCG,CCUGCG,CCUGCU,CCUGUU,CGAACG,CGAGGA,CGAGUA,CGAGUG,CGAGUU,CGCAGU,CGCUGC,CGUAAG,CGUGCG,CUACCG,CUAGAA,CUCAAG,CUCCAA,CUCCUG,CUCGUG,CUGAUG,GAAAGG,GAAGAA,GAAGCG,GAAGGC,GAAUAC,GAAUCC,GACCCC,GACGGA,GACUCA,GACUGU,GAGAAG,GAGAAU,GAGAGA,GAGAGU,GAGAUA,GAGAUG,GAGCAC,GAGCAG,GAGCUG,GAGGAA,GAGGAC,GAGGAG,GAGUGA,GAUCCC,GAUCCG,GAUGAU,GAUGCU,GAUGGA,GAUUAG,GAUUGA,GCACUG,GCAGAG,GCAGGG,GCAGGU,GCAGUA,GCAGUG,GCCACC,GCCACU,GCCCAC,GCCGAG,GCCGCC,GCCGUU,GCCUCA,GCCUCC,GCGUGU,GCUGUU,GGAACC,GGAAGG,GGAAUG,GGACCG,GGACGC,GGAGAA,GGAGAG,GGAGAU,GGAGCG,GGAGGA,GGAGUG,GGAGUU,GGAUCC,GGAUGG,GGCAGU,GGCCAC,GGCCGC,GGCCUC,GGCGUG,GGCUCC,GGCUCG,GGCUGA,GGCUGC,GGGAAU,GGGAGC,GGGCAG,GGGUAA,GGGUAC,GGGUAG,GGGUAU,GGGUGA,GGUACG,GGUAGG,GGUCAG,GGUUAC,GGUUCC,GGUUGG,GUAAGC,GUAGGC,GUCAGU,GUCGCC,GUCUAA,GUGCAG,GUUAAU,GUUCCC,GUUCCU,GUUCGA,GUUCUG,GUUGGC,GUUUCG,UAAGCU,UACGAG,UACGUG,UAGGCU,UAUGCU,UCACCG,UCAGUG,UCCAGA,UCCAGC,UCCAGG,UCCAGU,UCCUGC,UCCUGU,UCGAGU,UCGUGC,UGAGCU,UGAUCG,UGAUGG,UGCAGA,UGCAGU,UGCCGU,UGCGGU,UGCUGU,UGGAGA,UGGAGG,UGGAGU,UGGCAG,UGUUCC,UUAAUG,UUACUG,UUAGUG,UUCCAG,UUCCCG,UUCCUA,UUCCUG,UUCGAG,UUGUUG

RBP on BSJ (Exon and Intron)

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
RBM8A 1 84 0.004761905 0.0004282547 3.474998 UGCGCC ACGCGC,AUGCGC,CGCGCC,CGCGCG,CGCGCU,GCGCGC,GUGCGC,UGCGCC,UGCGCG,UGCGCU
RBM6 2 191 0.007142857 0.0009673519 2.884389 AAUCCA,AUCCAG AAUCCA,AUCCAA,AUCCAG,CAUCCA,UAUCCA
SNRPB2 3 288 0.009523810 0.0014560661 2.709463 AUUGCA,GUAUUG,UAUUGC AUUGCA,GUAUUG,UAUUGC,UGCAGU,UUGCAG
IFIH1 1 146 0.004761905 0.0007406288 2.684716 GGCCCU CCGCGG,CGCGGA,GCCGCG,GCGGAU,GGCCCU,GGCCGC,GGGCCG
ACO1 3 325 0.009523810 0.0016424829 2.535660 CAGUGA,CAGUGU CAGUGA,CAGUGC,CAGUGG,CAGUGU
IGF2BP1 1 173 0.004761905 0.0008766626 2.441445 AGCACC AAGCAC,ACCCGU,AGCACC,CACCCG,CCCGUU,GCACCC
AKAP1 1 221 0.004761905 0.0011185006 2.089973 AUAUAU AUAUAU,UAUAUA
RBM28 2 340 0.007142857 0.0017180572 2.055723 GUGUAG,UGUAGU AGUAGA,AGUAGG,AGUAGU,GAGUAG,GUGUAG,UGUAGA,UGUAGG,UGUAGU
A1CF 4 598 0.011904762 0.0030179363 1.979904 AUAAUU,UAAUUA,UUAAUU AGUAUA,AUAAUU,AUCAGU,CAGUAU,GAUCAG,UAAUUA,UAAUUG,UCAGUA,UGAUCA,UUAAUU
MSI1 7 961 0.019047619 0.0048468360 1.974496 AGGUGG,AGUAAG,AGUUAG,AGUUGG,UAGGAA,UAGGUG,UAGUAA AGGAAG,AGGAGG,AGGUAG,AGGUGG,AGUAAG,AGUAGG,AGUUAG,AGUUGG,UAGGAA,UAGGAG,UAGGUA,UAGGUG,UAGUAA,UAGUAG,UAGUUA,UAGUUG
G3BP2 3 490 0.009523810 0.0024738009 1.944809 GGAUAA,GGAUUA AGGAUA,AGGAUG,AGGAUU,GGAUAA,GGAUAG,GGAUGA,GGAUGG,GGAUUA,GGAUUG
QKI 5 904 0.014285714 0.0045596534 1.647577 AAUCAU,ACUUAU,AUCAUA,UAAUCA,UACUCA AAUCAU,ACACAC,ACACUA,ACUAAC,ACUAAU,ACUCAU,ACUUAU,AUCAUA,AUCUAA,AUCUAC,AUUAAC,CACACU,CACUAA,CUAACA,CUAACC,CUAACG,CUAAUC,CUACUC,CUCAUA,UAACCU,UAAUCA,UACUCA,UCAUAU,UCUAAU,UCUACU
ZFP36L2 4 774 0.011904762 0.0039046755 1.608264 AUUUAU,UAUUUA,UUAUUU,UUUAUU AUUUAU,UAUUUA,UUAUUU,UUUAUU
NONO 1 364 0.004761905 0.0018389762 1.372636 AGGAAC AGAGGA,AGGAAC,GAGAGG,GAGGAA
RBMS3 2 562 0.007142857 0.0028365578 1.332360 AAUAUA,AUAUAU AAUAUA,AUAUAG,AUAUAU,CAUAUA,CUAUAG,CUAUAU,UAUAGA,UAUAGC,UAUAUA,UAUAUC
PUM2 3 764 0.009523810 0.0038542926 1.305073 GUAUAU,UGUAAA,UGUAUA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
ZNF638 2 646 0.007142857 0.0032597743 1.131729 GUUCUU CGUUCG,CGUUCU,CGUUGG,CGUUGU,GGUUCG,GGUUCU,GGUUGG,GGUUGU,GUUCGU,GUUCUU,GUUGGU,GUUGUU,UGUUCG,UGUUCU,UGUUGG,UGUUGU
SNRPA 8 1947 0.021428571 0.0098145909 1.126536 AGCAGU,AUGCUG,AUUGCA,GAGCAG,UAUGCU,UUACCU,UUCCUG ACCUGC,AGCAGU,AGGAGA,AGUAGG,AGUAGU,AUACCU,AUGCAC,AUGCUG,AUUCCU,AUUGCA,CAGUAG,CCUGCU,CUGCUA,GAGCAG,GAUACC,GAUUCC,GCAGUA,GGAGAU,GGGUAU,GGUAUG,GUAGGC,GUAGGG,GUAGUC,GUAGUG,GUAUGC,GUUACC,GUUUCC,UACCUG,UAUGCU,UCCUGC,UGCACA,UGCACC,UGCACG,UUACCU,UUCCUG,UUGCAC,UUUCCU
KHSRP 25 5764 0.061904762 0.0290457477 1.091723 AUAUUU,AUGUAU,AUUUAU,AUUUUA,CAGCUU,CUGUAU,CUGUGU,GUAUAU,GUAUGU,UAUAUU,UAUUUA,UAUUUU,UGUAUA,UGUAUG,UGUGUA,UUAUUU,UUGUAU,UUUAUA,UUUAUU ACCCUC,ACCUUC,AGCCUC,AGCUUC,AUAUUU,AUGUAU,AUGUGU,AUUAUU,AUUUAU,AUUUUA,CACCCU,CACCUU,CAGCCU,CAGCUU,CCCCCU,CCCCUC,CCCCUU,CCCUCC,CCCUUC,CCGCCU,CCGCUU,CCUUCC,CGCCCU,CGCCUC,CGCCUU,CGCUUC,CGGCCU,CGGCUU,CUCCCU,CUCCUU,CUGCCU,CUGCUU,CUGUAU,CUGUGU,GCCCUC,GCCUCC,GCCUUC,GCUUCC,GGCCUC,GGCUUC,GUAUAU,GUAUGU,GUGUAU,GUGUGU,UAGGUA,UAGGUU,UAGUAU,UAUAUU,UAUUAU,UAUUUA,UAUUUU,UCCCUC,UCCUUC,UGCAUG,UGCCUC,UGCUUC,UGUAUA,UGUAUG,UGUGUA,UGUGUG,UUAUUA,UUAUUU,UUGUAU,UUGUGU,UUUAUA,UUUAUU
ZCRB1 2 666 0.007142857 0.0033605401 1.087808 GAUUUA,GGAUUA AAUUAA,ACUUAA,AUUUAA,GAAUUA,GACUUA,GAUUAA,GAUUUA,GCUUAA,GGAUUA,GGCUUA,GGUUUA,GUUUAA

Help

  • Note:
    • foreground: number of motifs found in the foreground target sequences (e.g. predicted circRNAs).
    • background: number of motifs found in the background target sequences (e.g. randomly generated circRNAs).
    • foregroundNorm: number of motifs found in the foreground target sequences (+1) divided by the number (or length) of sequences analyzed.
    • backgroundNorm: number of motifs found in background target sequences (+1) divided by the number (or length) of sequences analyzed.
    • log2FC: log2 fold change calculated in this way (foregroundNorm)/(backgroundNorm).
    • motifF: motifs of the corresponding RBP found in the foreground sequences.
    • motifB: motifs of the corresponding RBP found in the background sequences.

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