ENSG00000072736:+:16:68121986:68123121

1. Sequences

id gene transcript strand chrom startGR endGR length seq type
ENSG00000072736:+:16:68121986:68123121 ENSG00000072736 ENST00000535127 + 16 68121987 68123121 1135 AUCUUGAGCCAGAUGAUUGUGCAUCCAUUUACAUCUUUAAUGUAGAUCCACCUCCAUCUACUUUAACCACACCACUUUGCUUACCACAUCAUGGAUUACCGUCUCACUCUUCUGUUUUGUCACCAUCGUUUCAGCUCCAAAGUCACAAAAACUAUGAAGGAACUUGUGAGAUUCCUGAAUCUAAAUAUAGCCCAUUAGGUGGUCCCAAACCCUUUGAGUGCCCAAGUAUUCAAAUUACAUCUAUCUCUCCUAACUGUCAUCAAGAAUUAGAUGCACAUGAAGAUGACCUACAGAUAAAUGACCCAGAACGGGAAUUUUUGGAAAGGCCUUCUAGAGAUCAUCUCUAUCUUCCUCUUGAGCCAUCCUACCGGGAGUCUUCUCUUAGUCCUAGUCCUGCCAGCAGCAUCUCUUCUAGGAGUUGGUUCUCUGAUGCAUCUUCUUGUGAAUCGCUUUCACAUAUUUAUGAUGAUGUGGACUCAGAGUUGAAUGAAGCUGCAGCCCGAUUUACCCUUGGAUCCCCUCUGACUUCUCCUGGUGGCUCUCCAGGGGGCUGCCCUGGAGAAGAAACUUGGCAUCAACAGUAUGGACUUGGACACUCAUUAUCACCCAGGCAAUCUCCUUGCCACUCUCCUAGAUCCAGUGUCACUGAUGAGAAUUGGCUGAGCCCCAGGCCAGCCUCAGGACCCUCAUCAAGGCCCACAUCCCCCUGUGGGAAACGGAGGCACUCCAGUGCUGAAGUUUGUUAUGCUGGGUCCCUUUCACCCCAUCACUCACCUGUUCCUUCACCUGGUCACUCCCCCAGGGGAAGUGUGACAGAAGAUACGUGGCUCAAUGCUUCUGUCCAUGGUGGGUCAGGCCUUGGCCCUGCAGUUUUUCCAUUUCAGUACUGUGUAGAGACUGACAUCCCUCUCAAAACAAGGAAAACUUCUGAAGAUCAAGCUGCCAUACUACCAGGAAAAUUAGAGCUGUGUUCAGAUGACCAAGGGAGUUUAUCACCAGCCCGGGAGACUUCAAUAGAUGAUGGCCUUGGAUCUCAGUAUCCUUUAAAGAAAGAUUCAUGUGGUGAUCAGUUUCUUUCAGUUCCUUCACCCUUUACCUGGAGCAAACCAAAGCCUGGCCACACCCCUAUAUUUCGAUCUUGAGCCAGAUGAUUGUGCAUCCAUUUACAUCUUUAAUGUAGAUCCA circ
ENSG00000072736:+:16:68121986:68123121 ENSG00000072736 ENST00000535127 + 16 68121987 68123121 22 CCUAUAUUUCGAUCUUGAGCCA bsj
ENSG00000072736:+:16:68121986:68123121 ENSG00000072736 ENST00000535127 + 16 68121787 68121996 210 CAUAUCUGCAGAAAUAACCAGAUGCAUUGAAAAAACACACACAUGCCACUUCUUUAGUGGAGCUAAUGACAUACAUUUUAUAUCCCACUUUUUUCUCUCGAGAUUGUUAUUAUUUACUUUCUCAUCUAGUAAUUUAUACAUCUGAGUUUUCUAAUUUCUUGUUUUGUUGGGUUUUUUUUUUUUUGCCUUCCUCCCCGUAGAUCUUGAGCC ie_up
ENSG00000072736:+:16:68121986:68123121 ENSG00000072736 ENST00000535127 + 16 68123112 68123321 210 CUAUAUUUCGGUGAGUUGAUGGAAAUGGCUGCUGGUCAUUUUUCAUGUUUAUGGGUCAUUGGUGGCAUAUAACUACAUUAUCAGUAUAUAAUGGUUAUAUAAUGGUUUGACCAUUUCUCCUCUUCCUAUUUUUAAAAAAAAUUUUACCAAAUAACUUAAUGUUUAUUUUCAUUUGCAUCUUAAAAGUAUUUUUAGAUAGGUUAAAUAUAA ie_down
  • Note:
    • id: unique identifier.
    • gene: represents the gene from which the circRNA arises.
    • transcript: transcript whose exon coordinates overlap with the detected back-spliced junction coordinate and used in the downstream analysis.
    • strand: is the strand from which the gene is transcribed.
    • chrom: is the chromosome from which the circRNA is derived.
    • startGR: is the 5’ coordinate of the genomic range from which the sequence are extracted.
    • endGR: is the 3’ coordinate of the genomic range from which the sequence are extracted.
    • length: length of the extracted sequences.
    • seq: sequence used in the downstream analysis.
    • type: type of sequences retrieved. If type = “circ” the sequences derive from the internal circRNA sequences. If type = “bsj” the sequences derive from the back spliced junctions (BSJ). If type = “ie_up” the Intron or Exon sequences derive from the up-stream of BSJ up to 210 bp. If type = “ie_down” the Intron or Exon sequences derive from the down-stream of BSJ up to 210 bp.

2. RNA Binding Proteins Analysis

RBP on full sequence

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
ERI1 4 632 0.004405286 0.0009173461 2.263698 UUCAGA,UUUCAG UUCAGA,UUUCAG
CNOT4 1 314 0.001762115 0.0004564992 1.948623 GACAGA GACAGA
MATR3 3 739 0.003524229 0.0010724109 1.716450 AUCUUG,CAUCUU AAUCUU,AUCUUA,AUCUUG,CAUCUU
EIF4B 5 1179 0.005286344 0.0017100607 1.628223 CUUGGA,UUGGAA,UUGGAC CUCGGA,CUUGGA,GUCGGA,GUUGGA,UCGGAA,UCGGAC,UUGGAA,UUGGAC
A1CF 7 1642 0.007048458 0.0023810421 1.565715 AUCAGU,CAGUAU,GAUCAG,UCAGUA,UGAUCA AGUAUA,AUAAUU,AUCAGU,CAGUAU,GAUCAG,UAAUUA,UAAUUG,UCAGUA,UGAUCA,UUAAUU
RBM28 3 822 0.003524229 0.0011926949 1.563083 GUGUAG,UGUAGA AGUAGA,AGUAGG,AGUAGU,GAGUAG,GUGUAG,UGUAGA,UGUAGG,UGUAGU
SNRNP70 5 1237 0.005286344 0.0017941145 1.558998 AUCAAG,AUUCAA,GAUCAA AAUCAA,AUCAAG,AUUCAA,GAUCAA,GUUCAA,UUCAAG
RBM3 9 2152 0.008810573 0.0031201361 1.497627 AAAACU,AAACUA,AUACUA,GAAACG,GAAACU,GAGACU,GAUACG AAAACG,AAAACU,AAACGA,AAACUA,AAGACG,AAGACU,AAUACG,AAUACU,AGACGA,AGACUA,AUACGA,AUACUA,GAAACG,GAAACU,GAGACG,GAGACU,GAUACG,GAUACU
RC3H1 7 1786 0.007048458 0.0025897275 1.444507 CCUUCU,CUUCUG,UCCCUU,UUCUGU CCCUUC,CCUUCU,CUUCUG,UCCCUU,UCUGUG,UUCUGU
PUM2 7 1890 0.007048458 0.0027404447 1.362898 GUAGAU,UAAAUA,UACAUC,UGUAGA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
RBMS1 1 497 0.001762115 0.0007217036 1.287829 AUAUAG AUAUAC,AUAUAG,GAUAUA,UAUAUA
HNRNPM 3 999 0.003524229 0.0014492040 1.282047 AAGGAA,GAAGGA AAGGAA,GAAGGA,GGGGGG
RBM46 17 4554 0.015859031 0.0066011240 1.264521 AAUGAA,AUCAAG,AUCAUG,AUGAAG,AUGAUG,AUGAUU,GAUCAA,GAUCAU,GAUGAU AAUCAA,AAUCAU,AAUGAA,AAUGAU,AUCAAA,AUCAAG,AUCAAU,AUCAUA,AUCAUG,AUCAUU,AUGAAA,AUGAAG,AUGAAU,AUGAUA,AUGAUG,AUGAUU,GAUCAA,GAUCAU,GAUGAA,GAUGAU
RBMS3 4 1283 0.004405286 0.0018607779 1.243330 AAUAUA,AUAUAG,CUAUAU,UAUAGC AAUAUA,AUAUAG,AUAUAU,CAUAUA,CUAUAG,CUAUAU,UAUAGA,UAUAGC,UAUAUA,UAUAUC

RBP on BSJ (Exon Only)

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
SRSF3 2 61 0.13636364 0.004060781 5.069558 UCGAUC,UUCGAU AACGAU,ACCACC,ACUACG,AGAGAU,CACAAC,CACAUC,CACCAC,CAGAGA,CAUCAC,CAUCGU,CAUUCA,CCACCA,CCUCGU,CCUCUU,CUACAG,CUCCAA,CUCGUC,CUCUUC,CUUCAA,CUUUAU,GACUUC,GAGAUU,UACAGC,UCAGAG,UCUCCA,UCUUCA,UCUUCC,UGUCAA,UUCGAC,UUCUCC,UUCUUC
SRSF2 1 479 0.09090909 0.031438302 1.531901 UUUCGA AAAAGA,AAAGAG,AAGAGA,AAGCAG,AAGCUG,AAGGCG,AAUACC,AAUGCU,ACCACC,ACCACU,ACCAGC,ACCAGU,ACCCCC,ACCCCU,ACUCAA,AGAAGA,AGAAGC,AGAAUA,AGAAUG,AGAGAA,AGAGAU,AGAGGA,AGAGGU,AGAGUA,AGAGUG,AGAGUU,AGAUAA,AGAUCC,AGAUGC,AGCACU,AGCAGA,AGCAGU,AGCCGA,AGCCUC,AGCGGA,AGCUGU,AGGAAG,AGGAGA,AGGAGC,AGGAGG,AGGAGU,AGGCAG,AGGCGU,AGGCUG,AGGGUA,AGUAGG,AGUAGU,AGUGAC,AGUGUU,AUGAUG,AUGCUG,AUGGAG,AUUAGU,AUUCCU,AUUGAU,CAGAGA,CAGAGG,CAGAGU,CAGUAG,CAGUGG,CCACCA,CCAGAU,CCAGCC,CCAGCU,CCAGGG,CCAGGU,CCAGUC,CCAGUG,CCAGUU,CCCGCU,CCCGUG,CCGCUA,CCGGUG,CCUCCG,CCUGCG,CCUGCU,CCUGUU,CGAACG,CGAGGA,CGAGUA,CGAGUG,CGAGUU,CGCAGU,CGCUGC,CGUAAG,CGUGCG,CUACCG,CUAGAA,CUCAAG,CUCCAA,CUCCUG,CUCGUG,CUGAUG,GAAAGG,GAAGAA,GAAGCG,GAAGGC,GAAUAC,GAAUCC,GACCCC,GACGGA,GACUCA,GACUGU,GAGAAG,GAGAAU,GAGAGA,GAGAGU,GAGAUA,GAGAUG,GAGCAC,GAGCAG,GAGCUG,GAGGAA,GAGGAC,GAGGAG,GAGUGA,GAUCCC,GAUCCG,GAUGAU,GAUGCU,GAUGGA,GAUUAG,GAUUGA,GCACUG,GCAGAG,GCAGGG,GCAGGU,GCAGUA,GCAGUG,GCCACC,GCCACU,GCCCAC,GCCGAG,GCCGCC,GCCGUU,GCCUCA,GCCUCC,GCGUGU,GCUGUU,GGAACC,GGAAGG,GGAAUG,GGACCG,GGACGC,GGAGAA,GGAGAG,GGAGAU,GGAGCG,GGAGGA,GGAGUG,GGAGUU,GGAUCC,GGAUGG,GGCAGU,GGCCAC,GGCCGC,GGCCUC,GGCGUG,GGCUCC,GGCUCG,GGCUGA,GGCUGC,GGGAAU,GGGAGC,GGGCAG,GGGUAA,GGGUAC,GGGUAG,GGGUAU,GGGUGA,GGUACG,GGUAGG,GGUCAG,GGUUAC,GGUUCC,GGUUGG,GUAAGC,GUAGGC,GUCAGU,GUCGCC,GUCUAA,GUGCAG,GUUAAU,GUUCCC,GUUCCU,GUUCGA,GUUCUG,GUUGGC,GUUUCG,UAAGCU,UACGAG,UACGUG,UAGGCU,UAUGCU,UCACCG,UCAGUG,UCCAGA,UCCAGC,UCCAGG,UCCAGU,UCCUGC,UCCUGU,UCGAGU,UCGUGC,UGAGCU,UGAUCG,UGAUGG,UGCAGA,UGCAGU,UGCCGU,UGCGGU,UGCUGU,UGGAGA,UGGAGG,UGGAGU,UGGCAG,UGUUCC,UUAAUG,UUACUG,UUAGUG,UUCCAG,UUCCCG,UUCCUA,UUCCUG,UUCGAG,UUGUUG

RBP on BSJ (Exon and Intron)

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
FXR1 1 69 0.004761905 0.0003526804 3.755106 AUGACA ACGACA,ACGACG,AUGACA,AUGACG
RBM42 1 103 0.004761905 0.0005239823 3.183949 AACUAC AACUAA,AACUAC,ACUAAG,ACUACG
MATR3 3 216 0.009523810 0.0010933091 3.122837 AUCUUA,AUCUUG,CAUCUU AAUCUU,AUCUUA,AUCUUG,CAUCUU
CPEB4 9 691 0.023809524 0.0034864974 2.771688 UUUUUU UUUUUU
DDX19B 9 691 0.023809524 0.0034864974 2.771688 UUUUUU UUUUUU
EIF4A3 9 691 0.023809524 0.0034864974 2.771688 UUUUUU UUUUUU
IGHMBP2 4 350 0.011904762 0.0017684401 2.750989 AAAAAA AAAAAA
RBM41 6 502 0.016666667 0.0025342604 2.717329 AUACAU,UACAUU,UACUUU,UUACUU AUACAU,AUACUU,UACAUG,UACAUU,UACUUG,UACUUU,UUACAU,UUACUU
RBMS1 2 217 0.007142857 0.0010983474 2.701167 UAUAUA AUAUAC,AUAUAG,GAUAUA,UAUAUA
AKAP1 2 221 0.007142857 0.0011185006 2.674935 UAUAUA AUAUAU,UAUAUA
SYNCRIP 13 1041 0.033333333 0.0052498992 2.666604 AAAAAA,UUUUUU AAAAAA,UUUUUU
RBMS3 6 562 0.016666667 0.0028365578 2.554752 AAUAUA,CAUAUA,CUAUAU,UAUAUA,UAUAUC AAUAUA,AUAUAG,AUAUAU,CAUAUA,CUAUAG,CUAUAU,UAUAGA,UAUAGC,UAUAUA,UAUAUC
HNRNPU 13 1136 0.033333333 0.0057285369 2.540727 AAAAAA,UUUUUU AAAAAA,CCCCCC,GGGGGG,UUUUUU
RALY 12 1117 0.030952381 0.0056328094 2.458124 UUUUUC,UUUUUG,UUUUUU UUUUUC,UUUUUG,UUUUUU
U2AF2 11 1071 0.028571429 0.0054010480 2.403262 UUUUUC,UUUUUU UUUUCC,UUUUUC,UUUUUU
HNRNPCL1 14 1381 0.035714286 0.0069629182 2.358737 AUUUUU,CUUUUU,UUUUUG,UUUUUU AUUUUU,CUUUUU,UUUUUG,UUUUUU
PABPC4 4 462 0.011904762 0.0023327287 2.351448 AAAAAA AAAAAA,AAAAAG
CPEB2 15 1487 0.038095238 0.0074969770 2.345230 AUUUUU,CAUUUU,CUUUUU,UUUUUU AUUUUU,CAUUUU,CCUUUU,CUUUUU,UUUUUU
PUM2 7 764 0.019047619 0.0038542926 2.305073 GUAGAU,GUAUAU,UAAAUA,UACAUC,UAGAUA,UAUAUA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
ELAVL3 19 1928 0.047619048 0.0097188634 2.292679 AUUUAU,AUUUUA,UAUUUA,UAUUUU,UUAUUU,UUUAUU,UUUUUU AUUUAU,AUUUUA,UAUUUA,UAUUUU,UUAUUU,UUUAUU,UUUUUU
HNRNPA0 1 200 0.004761905 0.0010126965 2.233337 AAUUUA AAUUUA,AGAUAU,AGUAGG
PABPC3 2 310 0.007142857 0.0015669085 2.188580 AAAAAC,AAAACA AAAAAC,AAAACA,AAAACC,GAAAAC
KHDRBS2 9 1051 0.023809524 0.0053002821 2.167398 UUUUUU AAUAAA,AUAAAA,AUAAAC,GAUAAA,UUUUUU
HNRNPC 18 2006 0.045238095 0.0101118501 2.161491 AUUUUU,CUUUUU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AUUUUU,CUUUUU,GCAUAC,GGAUAC,GGAUAU,GGAUUC,GGGGGG,GGGUAC,UUUUUA,UUUUUC,UUUUUG,UUUUUU
FUS 15 1711 0.038095238 0.0086255542 2.142922 AAAAAA,CGGUGA,UGGUGG,UUUUUU AAAAAA,CGGUGA,CGGUGG,GGGGGG,GGGUGA,GGGUGC,GGGUGG,GGGUGU,UGGUGA,UGGUGG,UGGUGU,UUUUUU
HNRNPLL 6 748 0.016666667 0.0037736800 2.142922 ACACAC,ACAUAC,CACACA,CAUACA ACAAAC,ACACAC,ACACCA,ACAUAC,ACCACA,ACCGCA,ACGACA,ACUGCA,AGACGA,CAAACA,CACACA,CACACC,CACCAC,CACCGC,CACUGC,CAGACG,CAUACA,GACGAC,GCAAAC,GCACAC,GCAUAC
SART3 6 777 0.016666667 0.0039197904 2.088117 AAAAAA,AAAAAC,GAAAAA AAAAAA,AAAAAC,AGAAAA,GAAAAA,GAAAAC
ELAVL4 25 2916 0.061904762 0.0146966949 2.074559 AAAAAA,AUUUAU,UAUUUA,UAUUUU,UCUAAU,UUAUUU,UUUAUU,UUUUAU,UUUUUA,UUUUUU AAAAAA,AUCUAA,AUUUAU,GUAUCU,UAUCUA,UAUUUA,UAUUUU,UCUAAU,UGUAUC,UUAUUU,UUGUAU,UUUAUU,UUUGUA,UUUUAU,UUUUUA,UUUUUU
KHDRBS1 16 1945 0.040476190 0.0098045143 2.045555 AUUUAC,UAAAAA,UAAAAG,UUAAAA,UUAAAU,UUUUAC,UUUUUU AUAAAA,AUUUAA,AUUUAC,CAAAAU,CUAAAA,CUAAAU,GAAAAC,UAAAAA,UAAAAC,UAAAAG,UUAAAA,UUAAAU,UUUUAC,UUUUUU
A1CF 4 598 0.011904762 0.0030179363 1.979904 AGUAUA,AUCAGU,CAGUAU,UCAGUA AGUAUA,AUAAUU,AUCAGU,CAGUAU,GAUCAG,UAAUUA,UAAUUG,UCAGUA,UGAUCA,UUAAUU
IGF2BP3 10 1348 0.026190476 0.0067966546 1.946146 AAAAAC,AAAACA,AAACAC,AACACA,ACACAC,ACAUAC,CACACA,CAUACA AAAAAC,AAAACA,AAAAUC,AAACAC,AAACUC,AAAUAC,AAAUCA,AAAUUC,AACACA,AACUCA,AAUACA,AAUUCA,ACAAAC,ACAAUC,ACACAC,ACACUC,ACAUAC,ACAUUC,CAAACA,CAAUCA,CACACA,CACUCA,CAUACA,CAUUCA
KHDRBS3 12 1646 0.030952381 0.0082980653 1.899203 AAAUAA,UAAAUA,UUUUUU AAAUAA,AAUAAA,AGAUAA,AUAAAA,AUAAAC,AUAAAG,AUUAAA,GAUAAA,UAAAAC,UAAAUA,UUAAAC,UUUUUU
HNRNPL 10 1419 0.026190476 0.0071543732 1.872145 AAACAC,AAAUAA,AACACA,ACACAC,ACAUAC,CACACA,CAUACA AAACAA,AAACAC,AAAUAA,AAAUAC,AACAAA,AACACA,AAUAAA,AAUACA,ACACAA,ACACAC,ACACCA,ACACGA,ACAUAA,ACAUAC,ACCACA,CACAAA,CACAAC,CACAAG,CACACA,CACACC,CACCAC,CACGAA,CACGAC,CACGAG,CAUAAA,CAUACA
ZFP36L2 5 774 0.014285714 0.0039046755 1.871299 AUUUAU,UAUUUA,UUAUUU,UUUAUU AUUUAU,UAUUUA,UUAUUU,UUUAUU
NOVA1 10 1428 0.026190476 0.0071997179 1.863030 UUCAUU,UUUUUU AACACC,ACCACC,AGCACC,AGUCAC,AUCAAC,AUCACC,AUCAUC,AUUCAU,CAGUCA,CAUUCA,CCCCCC,GGGGGG,UCAGUC,UCAUUC,UUCAUU,UUUUUU
NOVA2 10 1434 0.026190476 0.0072299476 1.856985 UAGAUC,UUUUUU AACACC,ACCACC,AGACAU,AGAUCA,AGCACC,AGGCAU,AGUCAU,AUCAAC,AUCACC,AUCAUC,CCUAGA,CUAGAU,GAGACA,GAGGCA,GAGUCA,GAUCAC,GGGGGG,UAGAUC,UUUUUU
YBX2 1 263 0.004761905 0.0013301088 1.839994 ACAUCU AACAAC,AACAUC,ACAACA,ACAACG,ACAACU,ACAUCA,ACAUCG,ACAUCU
HNRNPD 10 1488 0.026190476 0.0075020153 1.803692 AAAAAA,AAUUUA,AUUUAU,UAUUUA,UUAUUU,UUUAUU AAAAAA,AAUUUA,AGAUAU,AGUAGG,AUUUAU,UAUUUA,UUAGAG,UUAGGA,UUAGGG,UUAUUU,UUUAUU
AGO2 4 677 0.011904762 0.0034159613 1.801175 AAAAAA AAAAAA,AAAGUG,AAGUGC,AGUGCU,GUGCUU,UAAAGU
ELAVL1 23 3309 0.057142857 0.0166767432 1.776736 AUUUAU,UAUUUA,UAUUUU,UGGUUU,UGUUUU,UUAUUU,UUGUUU,UUUAGU,UUUAUU,UUUGUU,UUUUUG,UUUUUU AUUUAU,CCCCCC,UAGUUU,UAUUUA,UAUUUU,UGAUUU,UGGUUU,UGUUUU,UUAGUU,UUAUUU,UUGAUU,UUGGUU,UUGUUU,UUUAGU,UUUAUU,UUUGGU,UUUGUU,UUUUUG,UUUUUU
PPIE 64 9262 0.154761905 0.0466696896 1.729493 AAAAAA,AAAAAU,AAAAUU,AAAUAA,AAAUAU,AAAUUU,AAUAUA,AAUUUA,AAUUUU,AUAUAA,AUAUUU,AUUAUU,AUUUAU,AUUUUA,AUUUUU,UAAAAA,UAAAUA,UAAUUU,UAUAAU,UAUAUA,UAUAUU,UAUUAU,UAUUUA,UAUUUU,UUAAAA,UUAAAU,UUAUAU,UUAUUA,UUAUUU,UUUAAA,UUUAUA,UUUAUU,UUUUAA,UUUUAU,UUUUUA,UUUUUU AAAAAA,AAAAAU,AAAAUA,AAAAUU,AAAUAA,AAAUAU,AAAUUA,AAAUUU,AAUAAA,AAUAAU,AAUAUA,AAUAUU,AAUUAA,AAUUAU,AAUUUA,AAUUUU,AUAAAA,AUAAAU,AUAAUA,AUAAUU,AUAUAA,AUAUAU,AUAUUA,AUAUUU,AUUAAA,AUUAAU,AUUAUA,AUUAUU,AUUUAA,AUUUAU,AUUUUA,AUUUUU,UAAAAA,UAAAAU,UAAAUA,UAAAUU,UAAUAA,UAAUAU,UAAUUA,UAAUUU,UAUAAA,UAUAAU,UAUAUA,UAUAUU,UAUUAA,UAUUAU,UAUUUA,UAUUUU,UUAAAA,UUAAAU,UUAAUA,UUAAUU,UUAUAA,UUAUAU,UUAUUA,UUAUUU,UUUAAA,UUUAAU,UUUAUA,UUUAUU,UUUUAA,UUUUAU,UUUUUA,UUUUUU
TIAL1 38 5597 0.092857143 0.0282043531 1.719095 AAAUUU,AAUUUU,AGUUUU,AUUUUA,AUUUUC,AUUUUU,CUUUUU,GUUUUC,GUUUUU,UAUUUU,UUAAAU,UUAUUU,UUUAAA,UUUAUU,UUUUAA,UUUUAU,UUUUCA,UUUUUA,UUUUUC,UUUUUG,UUUUUU AAAUUU,AAUUUU,AGUUUU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAGUUU,CUUUUA,CUUUUC,CUUUUG,CUUUUU,GUUUUC,GUUUUU,UAAAUU,UAUUUU,UCAGUU,UUAAAU,UUAUUU,UUCAGU,UUUAAA,UUUAUU,UUUCAG,UUUUAA,UUUUAU,UUUUCA,UUUUUA,UUUUUC,UUUUUG,UUUUUU
TIA1 34 5140 0.083333333 0.0259018541 1.685838 AUUUUC,AUUUUU,CUUUUU,GUUUUC,GUUUUG,GUUUUU,UAUUUU,UCUCCU,UUAUUU,UUCUCC,UUUAUU,UUUUAU,UUUUCU,UUUUGU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AUUUUC,AUUUUG,AUUUUU,CCUUUC,CUCCUU,CUUUUA,CUUUUC,CUUUUG,CUUUUU,GUUUUA,GUUUUC,GUUUUG,GUUUUU,UAUUUU,UCCUUU,UCUCCU,UUAUUU,UUCUCC,UUUAUU,UUUUAU,UUUUCG,UUUUCU,UUUUGG,UUUUGU,UUUUUA,UUUUUC,UUUUUG,UUUUUU
ELAVL2 65 9826 0.157142857 0.0495112858 1.666247 AAUUUA,AAUUUU,AUAUUU,AUUAUU,AUUUAC,AUUUAU,AUUUUA,AUUUUC,AUUUUU,CAUUUU,CUUUCU,CUUUUU,GUUUUC,GUUUUU,UAAUUU,UACUUU,UAUAUA,UAUAUU,UAUUAU,UAUUUA,UAUUUU,UCAUUU,UUACUU,UUAUAC,UUAUAU,UUAUUU,UUCAUU,UUCUUU,UUUACU,UUUAGU,UUUAUA,UUUAUG,UUUAUU,UUUCAU,UUUCUU,UUUUAA,UUUUAG,UUUUAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AAUUUA,AAUUUG,AAUUUU,AUACUU,AUAUUU,AUUAUU,AUUUAA,AUUUAC,AUUUAG,AUUUAU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAUUUU,CUUAUA,CUUUAA,CUUUCU,CUUUUA,CUUUUU,GAUUUA,GAUUUU,GUAUUG,GUUUUA,GUUUUC,GUUUUU,UAAGUU,UAAUUU,UACUUU,UAGUUA,UAUACU,UAUAUA,UAUAUU,UAUGUU,UAUUAU,UAUUGA,UAUUGU,UAUUUA,UAUUUG,UAUUUU,UCAUUU,UCUUAU,UCUUUU,UGAUUU,UGUAUU,UUAAGU,UUAAUU,UUACUU,UUAGUU,UUAUAC,UUAUAU,UUAUGU,UUAUUG,UUAUUU,UUCAUU,UUCUUU,UUGAUU,UUGUAU,UUUAAG,UUUAAU,UUUACU,UUUAGU,UUUAUA,UUUAUG,UUUAUU,UUUCAU,UUUCUU,UUUGAU,UUUUAA,UUUUAG,UUUUAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU
DAZAP1 18 2878 0.045238095 0.0145052398 1.640964 AAAAAA,AAUUUA,AGGUUA,AGUAUA,UAGGUU,UAGUAA,UUUUUU AAAAAA,AAUUUA,AGAUAU,AGGAAA,AGGAAG,AGGAUA,AGGAUG,AGGUAA,AGGUAG,AGGUUA,AGGUUG,AGUAAA,AGUAAG,AGUAGG,AGUAUA,AGUAUG,AGUUAA,AGUUAG,AGUUUA,AGUUUG,GGGGGG,GUAACG,UAGGAA,UAGGAU,UAGGUA,UAGGUU,UAGUAA,UAGUAU,UAGUUA,UAGUUU,UUUUUU
RBM4 6 1094 0.016666667 0.0055169287 1.595028 CCUCUU,CCUUCC,CUUCCU,CUUCUU,UUCUUG CCUCUU,CCUUCC,CCUUCU,CGCGCG,CGCGGG,CGCGGU,CUCUUU,CUUCCU,CUUCUU,GCGCGA,GCGCGC,GCGCGG,UCCUUC,UUCCUU,UUCUUG
PABPC1 7 1321 0.019047619 0.0066606207 1.515882 AAAAAA,AAAAAC,CAAAUA,GAAAAA AAAAAA,AAAAAC,ACAAAC,ACAAAU,ACGAAC,ACGAAU,ACUAAC,ACUAAU,AGAAAA,CAAACA,CAAACC,CAAAUA,CAAAUC,CGAACA,CGAACC,CGAAUA,CGAAUC,CUAACA,CUAACC,CUAAUA,CUAAUC,GAAAAA,GAAAAC
PTBP1 42 8003 0.102380952 0.0403264813 1.344148 ACUUUC,ACUUUU,AUUUUC,AUUUUU,CAUCUU,CCUCUU,CCUUCC,CUCCCC,CUCUUC,CUUCCU,CUUCUU,CUUUCU,CUUUUU,UACUUU,UAUUUU,UCCUCU,UCUCUC,UUACUU,UUAUUU,UUCUCU,UUCUUG,UUCUUU,UUUCUU,UUUUCU,UUUUUC,UUUUUU ACUUUC,ACUUUU,AGCUGU,AUCUUC,AUUUUC,AUUUUU,CAUCUU,CCAUCU,CCCCCC,CCUCUU,CCUUCC,CCUUUC,CCUUUU,CUAUCU,CUCCAU,CUCCCC,CUCUCU,CUCUUA,CUCUUC,CUCUUG,CUCUUU,CUUCCU,CUUCUC,CUUCUU,CUUUCC,CUUUCU,CUUUUC,CUUUUU,GCUCCC,GCUGUG,GGCUCC,GGGGGG,GUCUUA,GUCUUU,UACUUU,UAGCUG,UAUUUU,UCCAUC,UCCCCC,UCCUCU,UCUAUC,UCUCUC,UCUCUU,UCUUCU,UCUUUC,UCUUUU,UUACUU,UUAUUU,UUCCCC,UUCCUU,UUCUCU,UUCUUC,UUCUUG,UUCUUU,UUUCCC,UUUCUU,UUUUCC,UUUUCU,UUUUUC,UUUUUU
IGF2BP2 10 2163 0.026190476 0.0109028617 1.264335 AAAAAC,AAAACA,AAACAC,AACACA,ACACAC,ACAUAC,CACACA,CAUACA AAAAAC,AAAACA,AAAAUC,AAACAC,AAACUC,AAAUAC,AAAUCA,AAAUUC,AACACA,AACUCA,AAUACA,AAUUCA,ACAAAC,ACAAUC,ACACAC,ACACUC,ACAUAC,ACAUUC,CAAAAC,CAAACA,CAAAUC,CAACAC,CAACUC,CAAUAC,CAAUCA,CAAUUC,CACACA,CACUCA,CAUACA,CAUUCA,CCAAAC,CCAAUC,CCACAC,CCACUC,CCAUAC,CCAUUC,GAAAAC,GAAAUC,GAACAC,GAACUC,GAAUAC,GAAUUC,GCAAAC,GCAAUC,GCACAC,GCACUC,GCAUAC,GCAUUC
PUM1 10 2172 0.026190476 0.0109482064 1.258348 AAUGUU,GUAGAU,GUAUAU,UAAAUA,UAAUGU,UACAUC,UAGAUA,UAUAUA,UUAAUG AAUAUU,AAUGUU,AAUUGU,ACAUAA,AGAAUU,AGAUAA,AUUGUA,CAGAAU,CCAGAA,CUUGUA,GAAUUG,GUAAAU,GUAAUA,GUACAU,GUAGAU,GUAUAU,GUCCAG,UAAAUA,UAAUAU,UAAUGU,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUAAU,UGUACA,UGUAGA,UGUAUA,UGUCCA,UUAAUG,UUGUAC,UUGUAG,UUUAAU
HNRNPK 14 3244 0.035714286 0.0163492543 1.127276 AAAAAA,UCCCAC,UUUUUU AAAAAA,ACCCAA,ACCCAU,ACCCCA,ACCCCC,ACCCGA,ACCCGC,ACCCGU,ACCCUU,CAAACC,CAACCC,CAUACC,CAUCCC,CCAAAC,CCAACC,CCAUAC,CCAUCC,CCCCAA,CCCCAC,CCCCAU,CCCCCA,CCCCCC,CCCCCU,CCCCUA,CCCCUU,GCCCAA,GCCCAC,GCCCAG,GCCCCC,GCCCCU,GGGGGG,UCCCAA,UCCCAC,UCCCAU,UCCCCA,UCCCCC,UCCCCU,UCCCGA,UCCCUA,UCCCUU,UUUUUU
QKI 3 904 0.009523810 0.0045596534 1.062615 ACACAC,UCUAAU AAUCAU,ACACAC,ACACUA,ACUAAC,ACUAAU,ACUCAU,ACUUAU,AUCAUA,AUCUAA,AUCUAC,AUUAAC,CACACU,CACUAA,CUAACA,CUAACC,CUAACG,CUAAUC,CUACUC,CUCAUA,UAACCU,UAAUCA,UACUCA,UCAUAU,UCUAAU,UCUACU
PCBP2 17 4164 0.042857143 0.0209844821 1.030213 ACAUUA,ACCAAA,CCUCCC,CCUUCC,CUCCCC,CUUAAA,CUUCCU,UUUUUU AAACCA,AAAUUA,AAAUUC,AACCAA,AACCCU,AAUUAA,AAUUAC,AAUUCA,AAUUCC,ACAUUA,ACCAAA,ACCCUA,ACCUUA,AUUAAA,AUUACC,AUUCAC,AUUCCA,AUUCCC,CAAUUA,CAUUAA,CCAUUA,CCAUUC,CCCCCA,CCCCCC,CCCCCU,CCCUAA,CCCUCC,CCCUUA,CCCUUC,CCUCCA,CCUCCC,CCUCCU,CCUUAA,CCUUCC,CUAACC,CUCCCA,CUCCCC,CUCCCU,CUUAAA,CUUCCA,CUUCCC,CUUCCU,GGGGGG,UAACCC,UCCCCA,UUAGAG,UUAGGA,UUAGGG,UUUUUU

Help

  • Note:
    • foreground: number of motifs found in the foreground target sequences (e.g. predicted circRNAs).
    • background: number of motifs found in the background target sequences (e.g. randomly generated circRNAs).
    • foregroundNorm: number of motifs found in the foreground target sequences (+1) divided by the number (or length) of sequences analyzed.
    • backgroundNorm: number of motifs found in background target sequences (+1) divided by the number (or length) of sequences analyzed.
    • log2FC: log2 fold change calculated in this way (foregroundNorm)/(backgroundNorm).
    • motifF: motifs of the corresponding RBP found in the foreground sequences.
    • motifB: motifs of the corresponding RBP found in the background sequences.

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