• ENSG00000108094:-:10:35025131:35033273
  • 1. Sequences

ENSG00000108094:-:10:35025131:35033273

1. Sequences

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ENSG00000108094:-:10:35025131:35033273 ENSG00000108094 ENST00000688044 - 10 35025132 35033273 1497 AUGCCAACACUAUUUGUGGAGUCAGUUUUGGAAGUGCAUGGUAAAUUUGUUCAGCUUAUCAACACUGUUUUGAAUGGUGAUCAGCAUUUUAUGAGUGCGUUGGAUAAGGCCCUUACGUCAGUUGUAAAUUACAGAGAACCUAAGUCUGUUUGCAAAGCACCUGAACUGGUAAGUUUGGUGGUUGCUGAAAAGUAAUCUUAUGAAAAGUCAGUAUUAGAAAAUGAGAACUCAGAAUAUCAAAUUAAUUUGGUUUUUGUAGCAUUUUUCAGAAAAAUAGAAGGAAAAUUAUCUACAUUGUAUAUAGUUUGGCAUUUAUGUAAGGAAUGCAAUAUACUAUGUGUCUUAAAGAAUAACCAUUUUACAAAGUUUGGGUUUUAAUGUAUAUCUACUUUGAAAUAAUUUGCAAUACUUUUCAUGUAGAUUCUGUUACAUCUGAAAUCUAAAGGAAAUCUGAUGAUAAAGUUUGGGUAACCUUUGAAGGAAACUUGCUUACAAGAUUUUUGUAACUUUUUUUUAAAGUACUUGUUCAAUGUCAAAAAUUAUAAAACCACUCGAAACUCACCUAGGUGUUCUUUUAAAAAUUUGUAUUACUUAUAUCAGUUGCUUUAUUGGUCAAUAAGUGAUGAUUUGAUAUUUGACUUGUUCUUUUUAAAAAUUUACCUUAUGAUGUAUAUUUUAUUUAGUUUACAUUUAUGAUUAUUACAUAAAGCUUUAGAAGCCUGGUGUGGUUGUGCAUGCCUGUAGUCCCAACUACUUGGGAGGCUGAGGCAGGAGGAUCCUUUGAGCCUAGGAGUUUGAGGCUGCAGUGAGCUAUGAUCUUGUCCACUGCAAUCCAGCCUGGCAACAGAGCAAGACCCGGUCUCUAAAAAAAACAGCAAAAAUUCUGUCCGCUGAUCUUACCUUGUAUCACCACUUUGCCUCCUUUGAGGCGUGAUAUAUACAGAAGCACCCUUUGUAAGAUUUAUUAUCAAUUUCUACAUGAGCUUGCUAAGUACUGUGACAACUUACUGAAGAAGUCAGCGAAAGGGAUGACAGAGAAUGAAGUGGAAGACAGGCUCACGAGCUUCAUCACAGUGUUCAAAUACAUUGAUGACAAGGACGUCUUUCAAAAGUUCUACGCAAGAAUGCUGGCAAAACGUUUAAUUCAUGGGUUAUCCAUGUCUAUGGACUCUGAAGAAGCCAUGAUCAACAAAUUAAAGCAAGCCUGUGGUUAUGAGUUUACCAGCAAGCUACAUCGGAUGUAUACAGAUAUGAGUGUCAGCGCUGAUCUCAACAAUAAGUUCAACAAUUUUAUCAAAAACCAAGACACAGUAAUAGAUUUGGGAAUUAGUUUUCAAAUAUAUGUUCUACAGGCUGGUGCGUGGCCUCUUACUCAGGCUCCUUCAUCUACGUUUGCAAUUCCCCAGGAAUUAGAAAAAAGUGUACAGAUGUUUGAAUUAUUUUAUAGCCAACAUUUCAGUGGAAGGAAACUUACAUGGUUACAUUAUCUGUGUACAGAUGCCAACACUAUUUGUGGAGUCAGUUUUGGAAGUGCAUGGUAAAUUUGU circ
ENSG00000108094:-:10:35025131:35033273 ENSG00000108094 ENST00000688044 - 10 35025132 35033273 22 UCUGUGUACAGAUGCCAACACU bsj
ENSG00000108094:-:10:35025131:35033273 ENSG00000108094 ENST00000688044 - 10 35033264 35033473 210 GUGAGCCACUGUGCCCAGCCUUCAACACCAAAGUUGUAAAUUUCUAAGACCGUCUUAGCUAAAACCAUUUUCUGAGAAGUGUGCAUGUGUGAAACAUAAUUUCCUUGAGGAAAAAUUUACUAAUAAGUCUAAUAAACCUCAUAGUUUGGAUAUCCUUGAACCUCUUAAAAUGUGGUUUUGUACUUAUAUUUCAUUUUUAGAUGCCAACAC ie_up
ENSG00000108094:-:10:35025131:35033273 ENSG00000108094 ENST00000688044 - 10 35024932 35025141 210 CUGUGUACAGGUAAAAUGCAUUUAAUUAUAUCUGGCUUAAUGAAAUUUACCUGAUGAUUAUAUUAAUUUAGAAAGAGGUUUUCUAUGGCCCAAUUACAGUUUUUAACCUUUUCUCCUCCAUCAACCUUUCCCCAUUAAAGCAACUAACAAUGAAAUCCAAGUAUAGCACUUUUUCAUAGUAUUUUAUAAUUACACUGUUUAUAAUCUUGC ie_down
  • Note:
    • id: unique identifier.
    • gene: represents the gene from which the circRNA arises.
    • transcript: transcript whose exon coordinates overlap with the detected back-spliced junction coordinate and used in the downstream analysis.
    • strand: is the strand from which the gene is transcribed.
    • chrom: is the chromosome from which the circRNA is derived.
    • startGR: is the 5’ coordinate of the genomic range from which the sequence are extracted.
    • endGR: is the 3’ coordinate of the genomic range from which the sequence are extracted.
    • length: length of the extracted sequences.
    • seq: sequence used in the downstream analysis.
    • type: type of sequences retrieved. If type = “circ” the sequences derive from the internal circRNA sequences. If type = “bsj” the sequences derive from the back spliced junctions (BSJ). If type = “ie_up” the Intron or Exon sequences derive from the up-stream of BSJ up to 210 bp. If type = “ie_down” the Intron or Exon sequences derive from the down-stream of BSJ up to 210 bp.

2. RNA Binding Proteins Analysis

Rows: 1-10 / 43
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idColumn filter
foregroundColumn filter
backgroundColumn filter
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log2FCColumn filter
motifFColumn filter
motifBColumn filter
RBM41 18 1318 0.012692051 0.0019115000 2.731148 AUACAU,AUACUU,UACAUG,UACAUU,UACUUG,UACUUU,UUACAU,UUACUU AUACAU,AUACUU,UACAUG,UACAUU,UACUUG,UACUUU,UUACAU,UUACUU
RBMS1 6 497 0.004676019 0.0007217036 2.695802 AUAUAC,AUAUAG,GAUAUA,UAUAUA AUAUAC,AUAUAG,GAUAUA,UAUAUA
ESRP1 1 156 0.001336005 0.0002275250 2.553829 AGGGAU AGGGAU
AKAP1 4 426 0.003340013 0.0006188101 2.432285 AUAUAU,UAUAUA AUAUAU,UAUAUA
PUM2 19 1890 0.013360053 0.0027404447 2.285444 GUAAAU,GUAGAU,GUAUAU,UACAUA,UACAUC,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
HNRNPM 8 999 0.006012024 0.0014492040 2.052590 AAGGAA,GAAGGA AAGGAA,GAAGGA,GGGGGG
RBMS3 10 1283 0.007348029 0.0018607779 1.981452 AAUAUA,AUAUAG,AUAUAU,UAUAGC,UAUAUA,UAUAUC AAUAUA,AUAUAG,AUAUAU,CAUAUA,CUAUAG,CUAUAU,UAUAGA,UAUAGC,UAUAUA,UAUAUC
RBMY1A1 3 489 0.002672011 0.0007101099 1.911811 ACAAGA,CAAGAC ACAAGA,CAAGAC
ZFP36L2 9 1277 0.006680027 0.0018520827 1.850705 AUUUAU,UAUUUA,UUAUUU,UUUAUU AUUUAU,UAUUUA,UUAUUU,UUUAUU
FXR1 2 411 0.002004008 0.0005970720 1.746911 AUGACA ACGACA,ACGACG,AUGACA,AUGACG
IGF2BP1 5 831 0.004008016 0.0012057377 1.732972 AAGCAC,AGCACC,GCACCC AAGCAC,ACCCGU,AGCACC,CACCCG,CCCGUU,GCACCC
ELAVL4 35 5105 0.024048096 0.0073996354 1.700397 AAAAAA,AUCUAA,AUUUAU,UAUCUA,UAUUUA,UAUUUU,UGUAUC,UUAUUU,UUGUAU,UUUAUU,UUUGUA,UUUUAU,UUUUUA,UUUUUU AAAAAA,AUCUAA,AUUUAU,GUAUCU,UAUCUA,UAUUUA,UAUUUU,UCUAAU,UGUAUC,UUAUUU,UUGUAU,UUUAUU,UUUGUA,UUUUAU,UUUUUA,UUUUUU
ELAVL3 19 2867 0.013360053 0.0041563169 1.684548 AUUUAU,AUUUUA,UAUUUA,UAUUUU,UUAUUU,UUUAUU,UUUUUU AUUUAU,AUUUUA,UAUUUA,UAUUUU,UUAUUU,UUUAUU,UUUUUU
MATR3 4 739 0.003340013 0.0010724109 1.638996 AAUCUU,AUCUUA,AUCUUG AAUCUU,AUCUUA,AUCUUG,CAUCUU
RBFOX2 2 452 0.002004008 0.0006564894 1.610045 UGCAUG UGACUG,UGCAUG
HNRNPA0 2 453 0.002004008 0.0006579386 1.606863 AAUUUA,AGAUAU AAUUUA,AGAUAU,AGUAGG
CNOT4 1 314 0.001336005 0.0004564992 1.549241 GACAGA GACAGA
ERI1 3 632 0.002672011 0.0009173461 1.542388 UUCAGA,UUUCAG UUCAGA,UUUCAG
IGHMBP2 4 813 0.003340013 0.0011796520 1.501493 AAAAAA AAAAAA
A1CF 9 1642 0.006680027 0.0023810421 1.488261 AUAAUU,AUCAGU,CAGUAU,GAUCAG,UCAGUA,UGAUCA,UUAAUU AGUAUA,AUAAUU,AUCAGU,CAGUAU,GAUCAG,UAAUUA,UAAUUG,UCAGUA,UGAUCA,UUAAUU
SRP14 4 847 0.003340013 0.0012289250 1.442457 CCUGUA,CUGUAG,GCCUGU CCUGUA,CGCCUG,CUGUAG,GCCUGU
TUT1 3 678 0.002672011 0.0009840095 1.441182 AAAUAC,AAUACU,CAAUAC AAAUAC,AAUACU,AGAUAC,CAAUAC,CGAUAC,GAUACU
TIAL1 57 10182 0.038744155 0.0147572438 1.392555 AAAUUU,AAUUUU,AGUUUU,AUUUUA,AUUUUU,CAGUUU,CUUUUA,CUUUUC,CUUUUU,GUUUUC,GUUUUU,UAAAUU,UAUUUU,UCAGUU,UUAUUU,UUCAGU,UUUAAA,UUUAUU,UUUCAG,UUUUAA,UUUUAU,UUUUCA,UUUUUA,UUUUUC,UUUUUG,UUUUUU AAAUUU,AAUUUU,AGUUUU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAGUUU,CUUUUA,CUUUUC,CUUUUG,CUUUUU,GUUUUC,GUUUUU,UAAAUU,UAUUUU,UCAGUU,UUAAAU,UUAUUU,UUCAGU,UUUAAA,UUUAUU,UUUCAG,UUUUAA,UUUUAU,UUUUCA,UUUUUA,UUUUUC,UUUUUG,UUUUUU
PPIE 103 18315 0.069472278 0.0265436196 1.388072 AAAAAA,AAAAAU,AAAAUA,AAAAUU,AAAUAA,AAAUAU,AAAUUA,AAAUUU,AAUAAU,AAUAUA,AAUUAA,AAUUAU,AAUUUA,AAUUUU,AUAAAA,AUAAUU,AUAUAU,AUAUUU,AUUAAA,AUUAAU,AUUAUA,AUUAUU,AUUUAU,AUUUUA,AUUUUU,UAAAAA,UAAAUU,UAAUUU,UAUAAA,UAUAUA,UAUAUU,UAUUAU,UAUUUA,UAUUUU,UUAAAA,UUAAUU,UUAUAA,UUAUAU,UUAUUA,UUAUUU,UUUAAA,UUUAAU,UUUAUA,UUUAUU,UUUUAA,UUUUAU,UUUUUA,UUUUUU AAAAAA,AAAAAU,AAAAUA,AAAAUU,AAAUAA,AAAUAU,AAAUUA,AAAUUU,AAUAAA,AAUAAU,AAUAUA,AAUAUU,AAUUAA,AAUUAU,AAUUUA,AAUUUU,AUAAAA,AUAAAU,AUAAUA,AUAAUU,AUAUAA,AUAUAU,AUAUUA,AUAUUU,AUUAAA,AUUAAU,AUUAUA,AUUAUU,AUUUAA,AUUUAU,AUUUUA,AUUUUU,UAAAAA,UAAAAU,UAAAUA,UAAAUU,UAAUAA,UAAUAU,UAAUUA,UAAUUU,UAUAAA,UAUAAU,UAUAUA,UAUAUU,UAUUAA,UAUUAU,UAUUUA,UAUUUU,UUAAAA,UUAAAU,UUAAUA,UUAAUU,UUAUAA,UUAUAU,UUAUUA,UUAUUU,UUUAAA,UUUAAU,UUUAUA,UUUAUU,UUUUAA,UUUUAU,UUUUUA,UUUUUU
HNRNPD 15 2837 0.010688043 0.0041128408 1.377791 AAAAAA,AAUUUA,AGAUAU,AUUUAU,UAUUUA,UUAUUU,UUUAUU AAAAAA,AAUUUA,AGAUAU,AGUAGG,AUUUAU,UAUUUA,UUAGAG,UUAGGA,UUAGGG,UUAUUU,UUUAUU
ELAVL2 100 18468 0.067468270 0.0267653478 1.333843 AAUUUA,AAUUUG,AAUUUU,AUACUU,AUAUUU,AUUAUU,AUUUAC,AUUUAG,AUUUAU,AUUUUA,AUUUUU,CAUUUU,CUUAUA,CUUUUA,CUUUUU,GAUUUA,GAUUUU,GUUUUA,GUUUUC,GUUUUU,UAAGUU,UAAUUU,UACUUU,UAUACU,UAUAUA,UAUAUU,UAUGUU,UAUUAU,UAUUUA,UAUUUG,UAUUUU,UCUUAU,UCUUUU,UGAUUU,UGUAUU,UUAAUU,UUACUU,UUAGUU,UUAUAU,UUAUGU,UUAUUG,UUAUUU,UUCUUU,UUGUAU,UUUAAU,UUUAGU,UUUAUA,UUUAUG,UUUAUU,UUUCAU,UUUGAU,UUUUAA,UUUUAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AAUUUA,AAUUUG,AAUUUU,AUACUU,AUAUUU,AUUAUU,AUUUAA,AUUUAC,AUUUAG,AUUUAU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAUUUU,CUUAUA,CUUUAA,CUUUCU,CUUUUA,CUUUUU,GAUUUA,GAUUUU,GUAUUG,GUUUUA,GUUUUC,GUUUUU,UAAGUU,UAAUUU,UACUUU,UAGUUA,UAUACU,UAUAUA,UAUAUU,UAUGUU,UAUUAU,UAUUGA,UAUUGU,UAUUUA,UAUUUG,UAUUUU,UCAUUU,UCUUAU,UCUUUU,UGAUUU,UGUAUU,UUAAGU,UUAAUU,UUACUU,UUAGUU,UUAUAC,UUAUAU,UUAUGU,UUAUUG,UUAUUU,UUCAUU,UUCUUU,UUGAUU,UUGUAU,UUUAAG,UUUAAU,UUUACU,UUUAGU,UUUAUA,UUUAUG,UUUAUU,UUUCAU,UUUCUU,UUUGAU,UUUUAA,UUUUAG,UUUUAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU
ELAVL1 29 5554 0.020040080 0.0080503280 1.315769 AUUUAU,UAGUUU,UAUUUA,UAUUUU,UGAUUU,UGGUUU,UGUUUU,UUAGUU,UUAUUU,UUGGUU,UUUAGU,UUUAUU,UUUGGU,UUUGUU,UUUUUG,UUUUUU AUUUAU,CCCCCC,UAGUUU,UAUUUA,UAUUUU,UGAUUU,UGGUUU,UGUUUU,UUAGUU,UUAUUU,UUGAUU,UUGGUU,UUGUUU,UUUAGU,UUUAUU,UUUGGU,UUUGUU,UUUUUG,UUUUUU
PUM1 30 5823 0.020708083 0.0084401638 1.294851 ACAUAA,AUUGUA,CAGAAU,CUUGUA,GUAAAU,GUAAUA,GUAGAU,GUAUAU,UAAUGU,UACAUA,UACAUC,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA,UGUCCA,UUAAUG,UUGUAG,UUUAAU AAUAUU,AAUGUU,AAUUGU,ACAUAA,AGAAUU,AGAUAA,AUUGUA,CAGAAU,CCAGAA,CUUGUA,GAAUUG,GUAAAU,GUAAUA,GUACAU,GUAGAU,GUAUAU,GUCCAG,UAAAUA,UAAUAU,UAAUGU,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUAAU,UGUACA,UGUAGA,UGUAUA,UGUCCA,UUAAUG,UUGUAC,UUGUAG,UUUAAU
ZCRB1 7 1605 0.005344021 0.0023274215 1.199193 AAUUAA,GAAUUA,GAUUUA,GUUUAA AAUUAA,ACUUAA,AUUUAA,GAAUUA,GACUUA,GAUUAA,GAUUUA,GCUUAA,GGAUUA,GGCUUA,GGUUUA,GUUUAA
AGO2 8 1830 0.006012024 0.0026534924 1.179958 AAAAAA,AAAGUG,AAGUGC,UAAAGU AAAAAA,AAAGUG,AAGUGC,AGUGCU,GUGCUU,UAAAGU
RBM42 1 407 0.001336005 0.0005912752 1.176024 AACUAC AACUAA,AACUAC,ACUAAG,ACUACG
SYNCRIP 7 1634 0.005344021 0.0023694485 1.173374 AAAAAA,UUUUUU AAAAAA,UUUUUU
CPEB4 3 821 0.002672011 0.0011912456 1.165455 UUUUUU UUUUUU
DDX19B 3 821 0.002672011 0.0011912456 1.165455 UUUUUU UUUUUU
EIF4A3 3 821 0.002672011 0.0011912456 1.165455 UUUUUU UUUUUU
CPEB2 10 2261 0.007348029 0.0032780993 1.164498 AUUUUU,CAUUUU,CUUUUU,UUUUUU AUUUUU,CAUUUU,CCUUUU,CUUUUU,UUUUUU
PABPC3 5 1234 0.004008016 0.0017897669 1.163117 AAAAAC,AAAACA,AAAACC AAAAAC,AAAACA,AAAACC,GAAAAC
HNRNPCL1 9 2062 0.006680027 0.0029897078 1.159849 AUUUUU,CUUUUU,UUUUUG,UUUUUU AUUUUU,CUUUUU,UUUUUG,UUUUUU
PABPC4 5 1251 0.004008016 0.0018144033 1.143393 AAAAAA,AAAAAG AAAAAA,AAAAAG
SART3 11 2634 0.008016032 0.0038186524 1.069825 AAAAAA,AAAAAC,AGAAAA,GAAAAA AAAAAA,AAAAAC,AGAAAA,GAAAAA,GAAAAC
ZNF638 7 1773 0.005344021 0.0025708878 1.055659 CGUUGG,GGUUGU,GUUCUU,UGUUCU CGUUCG,CGUUCU,CGUUGG,CGUUGU,GGUUCG,GGUUCU,GGUUGG,GGUUGU,GUUCGU,GUUCUU,GUUGGU,GUUGUU,UGUUCG,UGUUCU,UGUUGG,UGUUGU
RALY 6 1553 0.004676019 0.0022520629 1.054034 UUUUUC,UUUUUG,UUUUUU UUUUUC,UUUUUG,UUUUUU
SRSF11 2 688 0.002004008 0.0009985015 1.005052 AAGAAG AAGAAG

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SRSF5 1 44 0.09090909 0.002947341 4.946939 UACAGA AACAGC,AGAAGA,AGGAAG,AUAAAG,CAACAG,CACAGA,CACAGC,CACAUC,CACGGA,CGCAGC,GAAGAA,GAGGAA,GGAAGA,UAAAGG,UACAGA,UACAGC,UACGUA,UGCAGA,UGCAGC,UGCGGC
SRSF9 1 134 0.09090909 0.008842023 3.361976 GAUGCC AGGAAA,AGGAAC,AGGACA,AGGACC,AGGAGA,AGGAGC,AUGAAC,AUGACA,AUGAGA,AUGAGC,CUGGAU,GAAGCA,GAAGCC,GAAGGA,GAAGGC,GAUGCA,GAUGCC,GAUGGA,GAUGGC,GGAAAA,GGAAAG,GGAACA,GGAACG,GGAAGC,GGAAGG,GGACAA,GGACAG,GGACCA,GGACCG,GGAGAA,GGAGAG,GGAGCA,GGAGCG,GGAGGA,GGAGGC,GGAUGG,GGGAGC,GGGUGG,GGUGCA,GGUGCC,GGUGGA,GGUGGC,UGAAAA,UGAACA,UGAACG,UGAAGC,UGAAGG,UGACAA,UGACAG,UGAGAA,UGAGAG,UGAGCA,UGAUGG,UGGAGC,UGGAGG,UGGUGC
SRSF2 1 479 0.09090909 0.031438302 1.531901 AGAUGC AAAAGA,AAAGAG,AAGAGA,AAGCAG,AAGCUG,AAGGCG,AAUACC,AAUGCU,ACCACC,ACCACU,ACCAGC,ACCAGU,ACCCCC,ACCCCU,ACUCAA,AGAAGA,AGAAGC,AGAAUA,AGAAUG,AGAGAA,AGAGAU,AGAGGA,AGAGGU,AGAGUA,AGAGUG,AGAGUU,AGAUAA,AGAUCC,AGAUGC,AGCACU,AGCAGA,AGCAGU,AGCCGA,AGCCUC,AGCGGA,AGCUGU,AGGAAG,AGGAGA,AGGAGC,AGGAGG,AGGAGU,AGGCAG,AGGCGU,AGGCUG,AGGGUA,AGUAGG,AGUAGU,AGUGAC,AGUGUU,AUGAUG,AUGCUG,AUGGAG,AUUAGU,AUUCCU,AUUGAU,CAGAGA,CAGAGG,CAGAGU,CAGUAG,CAGUGG,CCACCA,CCAGAU,CCAGCC,CCAGCU,CCAGGG,CCAGGU,CCAGUC,CCAGUG,CCAGUU,CCCGCU,CCCGUG,CCGCUA,CCGGUG,CCUCCG,CCUGCG,CCUGCU,CCUGUU,CGAACG,CGAGGA,CGAGUA,CGAGUG,CGAGUU,CGCAGU,CGCUGC,CGUAAG,CGUGCG,CUACCG,CUAGAA,CUCAAG,CUCCAA,CUCCUG,CUCGUG,CUGAUG,GAAAGG,GAAGAA,GAAGCG,GAAGGC,GAAUAC,GAAUCC,GACCCC,GACGGA,GACUCA,GACUGU,GAGAAG,GAGAAU,GAGAGA,GAGAGU,GAGAUA,GAGAUG,GAGCAC,GAGCAG,GAGCUG,GAGGAA,GAGGAC,GAGGAG,GAGUGA,GAUCCC,GAUCCG,GAUGAU,GAUGCU,GAUGGA,GAUUAG,GAUUGA,GCACUG,GCAGAG,GCAGGG,GCAGGU,GCAGUA,GCAGUG,GCCACC,GCCACU,GCCCAC,GCCGAG,GCCGCC,GCCGUU,GCCUCA,GCCUCC,GCGUGU,GCUGUU,GGAACC,GGAAGG,GGAAUG,GGACCG,GGACGC,GGAGAA,GGAGAG,GGAGAU,GGAGCG,GGAGGA,GGAGUG,GGAGUU,GGAUCC,GGAUGG,GGCAGU,GGCCAC,GGCCGC,GGCCUC,GGCGUG,GGCUCC,GGCUCG,GGCUGA,GGCUGC,GGGAAU,GGGAGC,GGGCAG,GGGUAA,GGGUAC,GGGUAG,GGGUAU,GGGUGA,GGUACG,GGUAGG,GGUCAG,GGUUAC,GGUUCC,GGUUGG,GUAAGC,GUAGGC,GUCAGU,GUCGCC,GUCUAA,GUGCAG,GUUAAU,GUUCCC,GUUCCU,GUUCGA,GUUCUG,GUUGGC,GUUUCG,UAAGCU,UACGAG,UACGUG,UAGGCU,UAUGCU,UCACCG,UCAGUG,UCCAGA,UCCAGC,UCCAGG,UCCAGU,UCCUGC,UCCUGU,UCGAGU,UCGUGC,UGAGCU,UGAUCG,UGAUGG,UGCAGA,UGCAGU,UGCCGU,UGCGGU,UGCUGU,UGGAGA,UGGAGG,UGGAGU,UGGCAG,UGUUCC,UUAAUG,UUACUG,UUAGUG,UUCCAG,UUCCCG,UUCCUA,UUCCUG,UUCGAG,UUGUUG
SRSF1 1 625 0.09090909 0.041000786 1.148773 GAUGCC AAAAGA,AAAGAA,AAAGAC,AAAGAG,AACAGC,AAGAAC,AAGACC,AAGAGA,AAGAGC,AAGAGG,AAGGAC,AAGGCG,AAGGUG,AAUGAC,AAUUUC,ACAAGG,ACAGAG,ACAGCA,ACAGCG,ACAGGA,ACAGGG,ACAGGU,ACAGUG,ACCCGA,ACCGGA,ACGAAU,ACGGAA,ACUGAG,ACUGGA,AGAAGA,AGAAGG,AGACAA,AGACAG,AGACGU,AGAGAA,AGAGAC,AGAGCA,AGAGGA,AGAGGG,AGAGGU,AGAUGG,AGCAGG,AGCCGA,AGCGGA,AGGAAA,AGGAAC,AGGAAG,AGGACA,AGGACC,AGGACG,AGGACU,AGGAGA,AGGAGC,AGGAGG,AGGUAA,AUGAAC,AUGAAG,AUGACA,AUGACU,AUGGAC,AUGGAG,CAAGGA,CAAUGG,CACAGA,CACAGC,CACAGG,CACAGU,CACCCA,CACCCG,CACCGG,CACGCA,CACGGA,CACUGG,CAGAAC,CAGACA,CAGACG,CAGAGA,CAGAGC,CAGAGG,CAGCCG,CAGUCG,CAUGGU,CCAACC,CCAAGG,CCACCA,CCACCC,CCACGG,CCAGCA,CCAGCC,CCAGCG,CCAGGA,CCAGGG,CCCACC,CCCAGC,CCCAGG,CCCCGC,CCCGGG,CCCGUU,CCCUCC,CCCUCG,CCGAGG,CCGCGA,CCGCUA,CCGGAC,CCGGAG,CCGGGA,CCGUCC,CCGUGC,CCGUGG,CCGUUU,CCUAGG,CCUCCG,CCUCGA,CCUGCG,CCUGGA,CCUGGG,CGAACG,CGAAGC,CGAGGA,CGAGGC,CGAGGG,CGAUGG,CGCAGC,CGCCGC,CGCUAU,CGCUGC,CGGAAU,CGGACA,CGGAGC,CGGAGG,CGGCGG,CGGGCA,CGGUGC,CGGUGG,CGUGCG,CGUGGA,CGUGGG,CUCAGG,CUCGUG,CUGAAC,CUGAGU,GAAAGA,GAAAGG,GAACAG,GAAGAA,GAAGAG,GAAGAU,GAAGCA,GAAGCC,GAAGCU,GAAGGA,GAAGGC,GAAGGU,GAAUGA,GACAGA,GACAGG,GACCCA,GACGAA,GACGAC,GACGGA,GACUGA,GAGAAC,GAGAAG,GAGACA,GAGACG,GAGCAG,GAGGAA,GAGGAC,GAGGAG,GAGGAU,GAGGCA,GAGGGA,GAGGGC,GAGGGG,GAGGUA,GAUGAA,GAUGAC,GAUGAU,GAUGCA,GAUGCC,GAUGCU,GAUGGA,GAUGGC,GCACGG,GCAGCA,GCAGCG,GCAGGA,GCAGGC,GCAGGG,GCAGGU,GCCCAC,GCCCGG,GCCCGU,GCGCAA,GCGCCA,GCGCCC,GCGCGG,GCGGAC,GCGGCG,GCGGUU,GCUGGG,GGAAAG,GGAACA,GGAAGA,GGAAGG,GGAAUG,GGACAA,GGACAG,GGACCA,GGACCG,GGACGA,GGAGAA,GGAGAC,GGAGAU,GGAGCA,GGAGCG,GGAGCU,GGAGGA,GGAGGC,GGAGGG,GGAGGU,GGAUAU,GGAUGA,GGAUUC,GGCACA,GGCAGA,GGCCGA,GGCGCA,GGGACG,GGGCCG,GGGGAA,GGGGAG,GGGGCA,GGGGCG,GGGGGA,GGGUAC,GGUCCA,GGUCCG,GGUGAA,GGUGCA,GGUGCC,GGUGCG,GGUGCU,GGUGGA,GGUGGC,GGUGGG,GGUGGU,GUAGGA,GUGACA,UAGACA,UAGGAC,UCAAGA,UCAGGU,UCGGGC,UGAACA,UGAAGA,UGAAGC,UGAAGG,UGACAG,UGACGA,UGACUG,UGAGUU,UGAUGA,UGAUGG,UGGACA,UGGAGA,UGGAGC,UGGAGG,UGGUGC,UGUAGG,UUCAAG

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idColumn filter
foregroundColumn filter
backgroundColumn filter
foregroundNormColumn filter
backgroundNormColumn filter
log2FCColumn filter
motifFColumn filter
motifBColumn filter
HNRNPA0 3 200 0.009523810 0.0010126965 3.233337 AAUUUA AAUUUA,AGAUAU,AGUAGG
RBM42 1 103 0.004761905 0.0005239823 3.183949 AACUAA AACUAA,AACUAC,ACUAAG,ACUACG
RBFOX2 1 124 0.004761905 0.0006297864 2.918604 UGCAUG UGACUG,UGCAUG
RBM6 2 191 0.007142857 0.0009673519 2.884389 AAUCCA,AUCCAA AAUCCA,AUCCAA,AUCCAG,CAUCCA,UAUCCA
MATR3 2 216 0.007142857 0.0010933091 2.707800 AAUCUU,AUCUUG AAUCUU,AUCUUA,AUCUUG,CAUCUU
A1CF 7 598 0.019047619 0.0030179363 2.657976 AGUAUA,AUAAUU,UAAUUA,UUAAUU AGUAUA,AUAAUU,AUCAGU,CAGUAU,GAUCAG,UAAUUA,UAAUUG,UCAGUA,UGAUCA,UUAAUU
RBFOX1 2 287 0.007142857 0.0014510278 2.299426 GCAUGU,UGCAUG AGCAUG,GCAUGA,GCAUGC,GCAUGU,UGACUG,UGCAUG
QKI 7 904 0.019047619 0.0045596534 2.062615 ACUAAC,ACUAAU,ACUUAU,CUAACA,CUCAUA,UAACCU,UCUAAU AAUCAU,ACACAC,ACACUA,ACUAAC,ACUAAU,ACUCAU,ACUUAU,AUCAUA,AUCUAA,AUCUAC,AUUAAC,CACACU,CACUAA,CUAACA,CUAACC,CUAACG,CUAAUC,CUACUC,CUCAUA,UAACCU,UAAUCA,UACUCA,UCAUAU,UCUAAU,UCUACU
PABPC3 1 310 0.004761905 0.0015669085 1.603618 AAAACC AAAAAC,AAAACA,AAAACC,GAAAAC
RBM46 6 1091 0.016666667 0.0055018138 1.598986 AAUGAA,AUGAAA,AUGAUU,GAUGAU AAUCAA,AAUCAU,AAUGAA,AAUGAU,AUCAAA,AUCAAG,AUCAAU,AUCAUA,AUCAUG,AUCAUU,AUGAAA,AUGAAG,AUGAAU,AUGAUA,AUGAUG,AUGAUU,GAUCAA,GAUCAU,GAUGAA,GAUGAU
ZCRB1 3 666 0.009523810 0.0033605401 1.502846 AUUUAA,GCUUAA,GGCUUA AAUUAA,ACUUAA,AUUUAA,GAAUUA,GACUUA,GAUUAA,GAUUUA,GCUUAA,GGAUUA,GGCUUA,GGUUUA,GUUUAA
HNRNPAB 1 351 0.004761905 0.0017734784 1.424957 AUAGCA AAAGAC,AAGACA,ACAAAG,AGACAA,AUAGCA,CAAAGA,GACAAA
PPIE 51 9262 0.123809524 0.0466696896 1.407565 AAAAAU,AAAAUU,AAAUUU,AAUAAA,AAUUAU,AAUUUA,AUAAUU,AUAUUA,AUAUUU,AUUAAA,AUUAAU,AUUAUA,AUUUAA,AUUUUA,AUUUUU,UAAAAU,UAAAUU,UAAUAA,UAAUUA,UAAUUU,UAUAAU,UAUAUU,UAUUAA,UAUUUU,UUAAAA,UUAAUU,UUAUAA,UUAUAU,UUUAAU,UUUAUA,UUUUAA,UUUUAU,UUUUUA AAAAAA,AAAAAU,AAAAUA,AAAAUU,AAAUAA,AAAUAU,AAAUUA,AAAUUU,AAUAAA,AAUAAU,AAUAUA,AAUAUU,AAUUAA,AAUUAU,AAUUUA,AAUUUU,AUAAAA,AUAAAU,AUAAUA,AUAAUU,AUAUAA,AUAUAU,AUAUUA,AUAUUU,AUUAAA,AUUAAU,AUUAUA,AUUAUU,AUUUAA,AUUUAU,AUUUUA,AUUUUU,UAAAAA,UAAAAU,UAAAUA,UAAAUU,UAAUAA,UAAUAU,UAAUUA,UAAUUU,UAUAAA,UAUAAU,UAUAUA,UAUAUU,UAUUAA,UAUUAU,UAUUUA,UAUUUU,UUAAAA,UUAAAU,UUAAUA,UUAAUU,UUAUAA,UUAUAU,UUAUUA,UUAUUU,UUUAAA,UUUAAU,UUUAUA,UUUAUU,UUUUAA,UUUUAU,UUUUUA,UUUUUU
NONO 1 364 0.004761905 0.0018389762 1.372636 GAGGAA AGAGGA,AGGAAC,GAGAGG,GAGGAA
SF1 6 1294 0.016666667 0.0065245869 1.353007 ACUAAC,ACUAAU,ACUUAU,CUAACA,UAACAA,UACUAA ACAGAC,ACAGUC,ACCGAC,ACGAAC,ACUAAC,ACUAAG,ACUAAU,ACUAGC,ACUGAC,ACUUAU,AGUAAC,AGUAAG,AUACUA,AUUAAC,CACAGA,CACCGA,CACUGA,CAGUCA,CGCUGA,CUAACA,GACUAA,GCUAAC,GCUGAC,GCUGCC,UAACAA,UACGAA,UACUAA,UACUAG,UACUGA,UAGUAA,UAUACU,UGCUAA,UGCUGA,UGCUGC
RBMS3 2 562 0.007142857 0.0028365578 1.332360 UAUAGC,UAUAUC AAUAUA,AUAUAG,AUAUAU,CAUAUA,CUAUAG,CUAUAU,UAUAGA,UAUAGC,UAUAUA,UAUAUC
PABPC1 6 1321 0.016666667 0.0066606207 1.323237 ACUAAC,ACUAAU,CUAACA,CUAAUA,GAAAAA AAAAAA,AAAAAC,ACAAAC,ACAAAU,ACGAAC,ACGAAU,ACUAAC,ACUAAU,AGAAAA,CAAACA,CAAACC,CAAAUA,CAAAUC,CGAACA,CGAACC,CGAAUA,CGAAUC,CUAACA,CUAACC,CUAAUA,CUAAUC,GAAAAA,GAAAAC
PUM2 3 764 0.009523810 0.0038542926 1.305073 GUAAAU,UGUAAA,UGUACA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
PABPC5 2 596 0.007142857 0.0030078597 1.247764 AGAAAG,GAAAUU AGAAAA,AGAAAG,AGAAAU,GAAAAU,GAAAGU,GAAAUU
RBM24 3 888 0.009523810 0.0044790407 1.088349 AGUGUG,GUGUGA,UGUGUG AGAGUG,AGUGUG,GAGUGA,GAGUGG,GAGUGU,GUGUGA,GUGUGG,GUGUGU,UGAGUG,UGUGUG
TRA2A 4 1133 0.011904762 0.0057134220 1.059112 AAGAGG,AGAAAG,GAAAGA,GAGGAA AAAGAA,AAGAAA,AAGAAG,AAGAGG,AGAAAG,AGAAGA,AGAGGA,AGGAAG,GAAAGA,GAAGAA,GAAGAG,GAGGAA
ELAVL2 41 9826 0.100000000 0.0495112858 1.014171 AAUUUA,AUAUUU,AUUUAA,AUUUAC,AUUUAG,AUUUUA,AUUUUC,AUUUUU,CAUUUU,CUUAUA,CUUUUU,GUUUUC,GUUUUU,UAAUUU,UAUAUU,UAUUUU,UCAUUU,UUAAUU,UUAUAU,UUCAUU,UUUAAU,UUUACU,UUUAUA,UUUCAU,UUUUAA,UUUUAG,UUUUAU,UUUUUA,UUUUUC AAUUUA,AAUUUG,AAUUUU,AUACUU,AUAUUU,AUUAUU,AUUUAA,AUUUAC,AUUUAG,AUUUAU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAUUUU,CUUAUA,CUUUAA,CUUUCU,CUUUUA,CUUUUU,GAUUUA,GAUUUU,GUAUUG,GUUUUA,GUUUUC,GUUUUU,UAAGUU,UAAUUU,UACUUU,UAGUUA,UAUACU,UAUAUA,UAUAUU,UAUGUU,UAUUAU,UAUUGA,UAUUGU,UAUUUA,UAUUUG,UAUUUU,UCAUUU,UCUUAU,UCUUUU,UGAUUU,UGUAUU,UUAAGU,UUAAUU,UUACUU,UUAGUU,UUAUAC,UUAUAU,UUAUGU,UUAUUG,UUAUUU,UUCAUU,UUCUUU,UUGAUU,UUGUAU,UUUAAG,UUUAAU,UUUACU,UUUAGU,UUUAUA,UUUAUG,UUUAUU,UUUCAU,UUUCUU,UUUGAU,UUUUAA,UUUUAG,UUUUAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU
  • Note:
    • foreground: number of motifs found in the foreground target sequences (e.g. predicted circRNAs).
    • background: number of motifs found in the background target sequences (e.g. randomly generated circRNAs).
    • foregroundNorm: number of motifs found in the foreground target sequences (+1) divided by the number (or length) of sequences analyzed.
    • backgroundNorm: number of motifs found in background target sequences (+1) divided by the number (or length) of sequences analyzed.
    • log2FC: log2 fold change calculated in this way (foregroundNorm)/(backgroundNorm).
    • motifF: motifs of the corresponding RBP found in the foreground sequences.
    • motifB: motifs of the corresponding RBP found in the background sequences.

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