ENSG00000151233:-:12:42097441:42119171

1. Sequences

id gene transcript strand chrom startGR endGR length seq type
ENSG00000151233:-:12:42097441:42119171 ENSG00000151233 ENST00000398675 - 12 42097442 42119171 847 GUACAGUCUGAAAAUACAGCCUGUUGAGAAAAUGCAUCUAGCUGUAGUUGCCUGUGGUGAAAGACUGGAAGAAACUAUGACCAUGUUGAAGUCAGCUAUCAUUUUCAGCAUCAAACCUCUUCAAUUCCAUAUUUUUGCUGAAGAUCAGCUACAUCAUAGCUUUAAAGGCAGACUUGACAACUGGUCAUUUCUACAAACAUUUAAUUAUACGUUAUACCCCAUAACCUUUCCAAGUGAGAAUGCAGCAGAGUGGAAAAAACUCUUUAAACCAUGUGCUUCGCAGAGAUUGUUCUUGCCGUUAAUCCUGAAAGAAGUUGACUCACUAUUGUAUGUCGACACUGAUAUCCUUUUUUUACGACCAGUUGAUGAUAUUUGGUCUUUACUAAAGAAAUUUAAUUCCACACAAAUUGCUGCAAUGGCACCAGAACAUGAGGAACCUCGAAUAGGAUGGUAUAAUCGCUUUGCUAGGCAUCCAUAUUAUGGAAAAACUGGAGUAAACUCUGGAGUUAUGUUGAUGAACAUGACUCGAAUGAGAAGGAAGUAUUUCAAGAAUGAUAUGACAACUGUACGACUACAAUGGGGAGAUAUACUUAUGCCAUUGCUUAAAAAAUACAAACUAAACAUCACAUGGGGUGAUCAAGAUCUAUUGAAUAUCGUGUUUUUUCAUAAUCCAGAAAGCCUUUUUGUUUUUCCGUGUCAAUGGAAUUAUCGACCAGAUCAUUGUAUAUAUGGAAGCAAUUGCCAAGAAGCAGAAGAAGGAGGAAUCUUUAUUCUUCAUGGGAACAGAGGUGUUUACCAUGACGAUAAGCAACCAGCAUUUAGAGCUGUUUAUGAAGCACUGAGAAAUGUACAGUCUGAAAAUACAGCCUGUUGAGAAAAUGCAUCUAGCUGUAGUUG circ
ENSG00000151233:-:12:42097441:42119171 ENSG00000151233 ENST00000398675 - 12 42097442 42119171 22 CACUGAGAAAUGUACAGUCUGA bsj
ENSG00000151233:-:12:42097441:42119171 ENSG00000151233 ENST00000398675 - 12 42119162 42119371 210 UAUAGUGAUGCAGUCAUAGCUUACUGCAGCAUUGAACUCUUGGUUUCAAGUGAUCCUCCUGCCUUAGCUUCCCGUGUAGCUGGGACUGCAGGCAUGAGUCACAACAUCUGGCUUUGAGCUUCACUUUUUGAGCAUGAUGAAAGUACACAUUGUAAACAUAUACUAAAACUGUUGAAAAAUGUGGUUUUCUUUCCUAUUAGGUACAGUCUG ie_up
ENSG00000151233:-:12:42097441:42119171 ENSG00000151233 ENST00000398675 - 12 42097242 42097451 210 ACUGAGAAAUGUAAGAUUUGCCUUUCCUUUUUUUUAACUUUUUGUUUGAAAAUACUUUCAAGCUAAUGGUUAGUUUACAAAAAUAGUACAAAGAAUUUUUACACACACUCAGCCUCAUCUGUUAUUAACAUUUUGCCUUAUUUGCUUUGUCGUUGGUUUUCUCUCUACAUUUUUUUUUCCUGAAAACAAUGUAGUUGUUUUUUCAGAAAA ie_down
  • Note:
    • id: unique identifier.
    • gene: represents the gene from which the circRNA arises.
    • transcript: transcript whose exon coordinates overlap with the detected back-spliced junction coordinate and used in the downstream analysis.
    • strand: is the strand from which the gene is transcribed.
    • chrom: is the chromosome from which the circRNA is derived.
    • startGR: is the 5’ coordinate of the genomic range from which the sequence are extracted.
    • endGR: is the 3’ coordinate of the genomic range from which the sequence are extracted.
    • length: length of the extracted sequences.
    • seq: sequence used in the downstream analysis.
    • type: type of sequences retrieved. If type = “circ” the sequences derive from the internal circRNA sequences. If type = “bsj” the sequences derive from the back spliced junctions (BSJ). If type = “ie_up” the Intron or Exon sequences derive from the up-stream of BSJ up to 210 bp. If type = “ie_down” the Intron or Exon sequences derive from the down-stream of BSJ up to 210 bp.

2. RNA Binding Proteins Analysis

RBP on full sequence

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
RBMS1 3 497 0.004722550 0.0007217036 2.710088 AUAUAC,GAUAUA,UAUAUA AUAUAC,AUAUAG,GAUAUA,UAUAUA
FXR1 2 411 0.003541913 0.0005970720 2.568552 AUGACA,AUGACG ACGACA,ACGACG,AUGACA,AUGACG
AKAP1 2 426 0.003541913 0.0006188101 2.516960 AUAUAU,UAUAUA AUAUAU,UAUAUA
HNRNPA0 2 453 0.003541913 0.0006579386 2.428504 AAUUUA,AGAUAU AAUUUA,AGAUAU,AGUAGG
ANKHD1 1 339 0.002361275 0.0004927293 2.260699 GACGAU AGACGA,AGACGU,GACGAA,GACGAU,GACGUA,GACGUU
SRSF11 3 688 0.004722550 0.0009985015 2.241730 AAGAAG AAGAAG
RALY 7 1553 0.009445100 0.0022520629 2.068319 UUUUUC,UUUUUG,UUUUUU UUUUUC,UUUUUG,UUUUUU
RBM42 1 407 0.002361275 0.0005912752 1.997664 AACUAA AACUAA,AACUAC,ACUAAG,ACUACG
CPEB4 3 821 0.004722550 0.0011912456 1.987095 UUUUUU UUUUUU
DDX19B 3 821 0.004722550 0.0011912456 1.987095 UUUUUU UUUUUU
EIF4A3 3 821 0.004722550 0.0011912456 1.987095 UUUUUU UUUUUU
U2AF2 6 1477 0.008264463 0.0021419234 1.948014 UUUUCC,UUUUUC,UUUUUU UUUUCC,UUUUUC,UUUUUU
SRP14 3 847 0.004722550 0.0012289250 1.942169 CUGUAG,GCCUGU CCUGUA,CGCCUG,CUGUAG,GCCUGU
CPEB2 9 2261 0.011806375 0.0032780993 1.848635 AUUUUU,CAUUUU,CCUUUU,CUUUUU,UUUUUU AUUUUU,CAUUUU,CCUUUU,CUUUUU,UUUUUU
TUT1 2 678 0.003541913 0.0009840095 1.847785 AAAUAC AAAUAC,AAUACU,AGAUAC,CAAUAC,CGAUAC,GAUACU
HNRNPCL1 8 2062 0.010625738 0.0029897078 1.829487 AUUUUU,CUUUUU,UUUUUG,UUUUUU AUUUUU,CUUUUU,UUUUUG,UUUUUU
YBX2 5 1480 0.007083825 0.0021462711 1.722696 AACAUC,ACAACU,ACAUCA AACAAC,AACAUC,ACAACA,ACAACG,ACAACU,ACAUCA,ACAUCG,ACAUCU
HNRNPM 3 999 0.004722550 0.0014492040 1.704305 AAGGAA,GAAGGA AAGGAA,GAAGGA,GGGGGG
SSB 4 1260 0.005903188 0.0018274462 1.691665 CUGUUU,GCUGUU,UGUUUU CUGUUU,GCUGUU,UGCUGU,UGUUUU
RBM6 3 1054 0.004722550 0.0015289102 1.627062 AAUCCA,AUCCAG,CAUCCA AAUCCA,AUCCAA,AUCCAG,CAUCCA,UAUCCA
IGHMBP2 2 813 0.003541913 0.0011796520 1.586167 AAAAAA AAAAAA
SYNCRIP 5 1634 0.007083825 0.0023694485 1.579977 AAAAAA,UUUUUU AAAAAA,UUUUUU
A1CF 5 1642 0.007083825 0.0023810421 1.572936 GAUCAG,UAAUUA,UGAUCA,UUAAUU AGUAUA,AUAAUU,AUCAGU,CAGUAU,GAUCAG,UAAUUA,UAAUUG,UCAGUA,UGAUCA,UUAAUU
HNRNPC 11 3471 0.014167651 0.0050316361 1.493501 AUUUUU,CUUUUU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AUUUUU,CUUUUU,GCAUAC,GGAUAC,GGAUAU,GGAUUC,GGGGGG,GGGUAC,UUUUUA,UUUUUC,UUUUUG,UUUUUU
PABPC5 7 2400 0.009445100 0.0034795387 1.440670 AGAAAA,AGAAAG,AGAAAU,GAAAAU,GAAAUU AGAAAA,AGAAAG,AGAAAU,GAAAAU,GAAAGU,GAAAUU
RBM3 6 2152 0.008264463 0.0031201361 1.405312 AAAACU,AAACUA,AAGACU,GAAACU AAAACG,AAAACU,AAACGA,AAACUA,AAGACG,AAGACU,AAUACG,AAUACU,AGACGA,AGACUA,AUACGA,AUACUA,GAAACG,GAAACU,GAGACG,GAGACU,GAUACG,GAUACU
SNRNP70 3 1237 0.004722550 0.0017941145 1.396294 AUCAAG,GAUCAA,UUCAAG AAUCAA,AUCAAG,AUUCAA,GAUCAA,GUUCAA,UUCAAG
PUM2 5 1890 0.007083825 0.0027404447 1.370119 GUAUAU,UACAUC,UAUAUA,UGUACA,UGUAUA GUAAAU,GUACAU,GUAGAU,GUAUAU,UAAAUA,UACAUA,UACAUC,UAGAUA,UAUAUA,UGUAAA,UGUACA,UGUAGA,UGUAUA
ERI1 1 632 0.002361275 0.0009173461 1.364028 UUUCAG UUCAGA,UUUCAG
PABPC1 13 4443 0.016528926 0.0064402624 1.359802 AAAAAA,AAAAAC,ACAAAC,ACAAAU,AGAAAA,CAAACA,CAAACC,CGAAUA,GAAAAA AAAAAA,AAAAAC,ACAAAC,ACAAAU,ACGAAC,ACGAAU,ACUAAC,ACUAAU,AGAAAA,CAAACA,CAAACC,CAAAUA,CAAAUC,CGAACA,CGAACC,CGAAUA,CGAAUC,CUAACA,CUAACC,CUAAUA,CUAAUC,GAAAAA,GAAAAC
ZCRB1 4 1605 0.005903188 0.0023274215 1.342762 AUUUAA,GAAUUA,GCUUAA AAUUAA,ACUUAA,AUUUAA,GAAUUA,GACUUA,GAUUAA,GAUUUA,GCUUAA,GGAUUA,GGCUUA,GGUUUA,GUUUAA
RBM46 13 4554 0.016528926 0.0066011240 1.324209 AAUGAU,AUCAAA,AUCAAG,AUCAUA,AUCAUU,AUGAAG,AUGAUA,GAUCAA,GAUCAU,GAUGAA,GAUGAU AAUCAA,AAUCAU,AAUGAA,AAUGAU,AUCAAA,AUCAAG,AUCAAU,AUCAUA,AUCAUG,AUCAUU,AUGAAA,AUGAAG,AUGAAU,AUGAUA,AUGAUG,AUGAUU,GAUCAA,GAUCAU,GAUGAA,GAUGAU
HNRNPU 5 1965 0.007083825 0.0028491350 1.314005 AAAAAA,UUUUUU AAAAAA,CCCCCC,GGGGGG,UUUUUU
SART3 7 2634 0.009445100 0.0038186524 1.306503 AAAAAA,AAAAAC,AGAAAA,GAAAAA AAAAAA,AAAAAC,AGAAAA,GAAAAA,GAAAAC
SRSF4 10 3740 0.012987013 0.0054214720 1.260313 AAGAAG,AGAAGA,AGGAAG,GAAGAA,GAGGAA,GGAAGA AAGAAG,AGAAGA,AGGAAG,GAAGAA,GAGGAA,GGAAGA
MATR3 1 739 0.002361275 0.0010724109 1.138708 AAUCUU AAUCUU,AUCUUA,AUCUUG,CAUCUU
IGF2BP3 12 4815 0.015348288 0.0069793662 1.136910 AAAAAC,AAACUC,AAAUAC,AAUACA,ACAAAC,CAAACA,CACACA AAAAAC,AAAACA,AAAAUC,AAACAC,AAACUC,AAAUAC,AAAUCA,AAAUUC,AACACA,AACUCA,AAUACA,AAUUCA,ACAAAC,ACAAUC,ACACAC,ACACUC,ACAUAC,ACAUUC,CAAACA,CAAUCA,CACACA,CACUCA,CAUACA,CAUUCA
NONO 3 1498 0.004722550 0.0021723567 1.120305 AGGAAC,GAGGAA AGAGGA,AGGAAC,GAGAGG,GAGGAA
ELAVL2 47 18468 0.056670602 0.0267653478 1.082234 AAUUUA,AUACUU,AUAUUU,AUUUAA,AUUUAG,AUUUUC,AUUUUU,CAUUUU,CUUUAA,CUUUUU,GUUUUU,UAUACU,UAUAUA,UAUGUU,UAUUAU,UAUUGA,UAUUGU,UAUUUG,UAUUUU,UCAUUU,UUAAUU,UUAUAC,UUAUGU,UUGUAU,UUUAAU,UUUACU,UUUAUG,UUUAUU,UUUCAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AAUUUA,AAUUUG,AAUUUU,AUACUU,AUAUUU,AUUAUU,AUUUAA,AUUUAC,AUUUAG,AUUUAU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAUUUU,CUUAUA,CUUUAA,CUUUCU,CUUUUA,CUUUUU,GAUUUA,GAUUUU,GUAUUG,GUUUUA,GUUUUC,GUUUUU,UAAGUU,UAAUUU,UACUUU,UAGUUA,UAUACU,UAUAUA,UAUAUU,UAUGUU,UAUUAU,UAUUGA,UAUUGU,UAUUUA,UAUUUG,UAUUUU,UCAUUU,UCUUAU,UCUUUU,UGAUUU,UGUAUU,UUAAGU,UUAAUU,UUACUU,UUAGUU,UUAUAC,UUAUAU,UUAUGU,UUAUUG,UUAUUU,UUCAUU,UUCUUU,UUGAUU,UUGUAU,UUUAAG,UUUAAU,UUUACU,UUUAGU,UUUAUA,UUUAUG,UUUAUU,UUUCAU,UUUCUU,UUUGAU,UUUUAA,UUUUAG,UUUUAU,UUUUUA,UUUUUC,UUUUUG,UUUUUU
TRA2B 18 7329 0.022432113 0.0106226650 1.078420 AAAGAA,AAGAAG,AAGAAU,AAGGAA,AGAAGA,AGAAGG,AGGAAG,GAAAGA,GAAGAA,GAAGGA,GAAUUA AAAGAA,AAGAAC,AAGAAG,AAGAAU,AAGGAA,AAUAAG,AGAAGA,AGAAGG,AGGAAA,AGGAAG,AUAAGA,GAAAGA,GAAGAA,GAAGGA,GAAUUA,GGAAGG,UAAGAA
CSTF2 4 1967 0.005903188 0.0028520334 1.049503 GUGUUU,UGUUUU GUGUGU,GUGUUG,GUGUUU,GUUUUG,UGUGUG,UGUGUU,UGUUUG,UGUUUU
TRA2A 16 6871 0.020070838 0.0099589296 1.011038 AAAGAA,AAGAAA,AAGAAG,AGAAAG,AGAAGA,AGGAAG,GAAAGA,GAAGAA,GAGGAA AAAGAA,AAGAAA,AAGAAG,AAGAGG,AGAAAG,AGAAGA,AGAGGA,AGGAAG,GAAAGA,GAAGAA,GAAGAG,GAGGAA
HNRNPD 6 2837 0.008264463 0.0041128408 1.006786 AAAAAA,AAUUUA,AGAUAU,UUAGAG,UUUAUU AAAAAA,AAUUUA,AGAUAU,AGUAGG,AUUUAU,UAUUUA,UUAGAG,UUAGGA,UUAGGG,UUAUUU,UUUAUU

RBP on BSJ (Exon Only)

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
PUM2 1 7 0.09090909 0.0005239717 7.438792 UGUACA GUAAAU,UAAAUA,UAUAUA,UGUAAA,UGUAGA,UGUAUA
PUM1 1 16 0.09090909 0.0011134399 6.351329 UGUACA AAUAUU,AAUGUU,AAUUGU,ACAUAA,AGAUAA,CAGAAU,GUAAAU,GUCCAG,UAAAUA,UAUAUA,UGUAAA,UGUAGA,UGUAUA,UUAAUG
ENOX1 1 26 0.09090909 0.0017684045 5.683904 UGUACA AAGACA,AGACAG,AGGACA,AGUACA,CAGACA,CAUACA,CGGACA,CGUACA,GGACAG,UAGACA,UGGACA

RBP on BSJ (Exon and Intron)

Plot

Spreadsheet

id foreground background foregroundNorm backgroundNorm log2FC motifF motifB
YBX2 3 263 0.009523810 0.0013301088 2.839994 AACAUC,ACAACA,ACAUCU AACAAC,AACAUC,ACAACA,ACAACG,ACAACU,ACAUCA,ACAUCG,ACAUCU
RBFOX1 3 287 0.009523810 0.0014510278 2.714464 AGCAUG,GCAUGA AGCAUG,GCAUGA,GCAUGC,GCAUGU,UGACUG,UGCAUG
PTBP2 1 146 0.004761905 0.0007406288 2.684716 CUCUCU CUCUCU
ERI1 2 228 0.007142857 0.0011537686 2.630147 UUCAGA,UUUCAG UUCAGA,UUUCAG
CPEB4 8 691 0.021428571 0.0034864974 2.619685 UUUUUU UUUUUU
DDX19B 8 691 0.021428571 0.0034864974 2.619685 UUUUUU UUUUUU
EIF4A3 8 691 0.021428571 0.0034864974 2.619685 UUUUUU UUUUUU
TUT1 2 230 0.007142857 0.0011638452 2.617602 AAAUAC,AAUACU AAAUAC,AAUACU,AGAUAC,CAAUAC,CGAUAC,GAUACU
SNRNP70 2 253 0.007142857 0.0012797259 2.480666 UUCAAG AAUCAA,AUCAAG,AUUCAA,GAUCAA,GUUCAA,UUCAAG
RALY 12 1117 0.030952381 0.0056328094 2.458124 UUUUUC,UUUUUG,UUUUUU UUUUUC,UUUUUG,UUUUUU
HNRNPCL1 15 1381 0.038095238 0.0069629182 2.451847 AUUUUU,CUUUUU,UUUUUG,UUUUUU AUUUUU,CUUUUU,UUUUUG,UUUUUU
CPEB2 16 1487 0.040476190 0.0074969770 2.432693 AUUUUU,CAUUUU,CCUUUU,CUUUUU,UUUUUU AUUUUU,CAUUUU,CCUUUU,CUUUUU,UUUUUU
U2AF2 11 1071 0.028571429 0.0054010480 2.403262 UUUUCC,UUUUUC,UUUUUU UUUUCC,UUUUUC,UUUUUU
HNRNPC 19 2006 0.047619048 0.0101118501 2.235492 AUUUUU,CUUUUU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AUUUUU,CUUUUU,GCAUAC,GGAUAC,GGAUAU,GGAUUC,GGGGGG,GGGUAC,UUUUUA,UUUUUC,UUUUUG,UUUUUU
PABPC3 2 310 0.007142857 0.0015669085 2.188580 AAAACA,GAAAAC AAAAAC,AAAACA,AAAACC,GAAAAC
RBMS1 1 217 0.004761905 0.0010983474 2.116204 AUAUAC AUAUAC,AUAUAG,GAUAUA,UAUAUA
RBM28 2 340 0.007142857 0.0017180572 2.055723 GUGUAG,UGUAGU AGUAGA,AGUAGG,AGUAGU,GAGUAG,GUGUAG,UGUAGA,UGUAGG,UGUAGU
SYNCRIP 8 1041 0.021428571 0.0052498992 2.029174 UUUUUU AAAAAA,UUUUUU
KHDRBS2 8 1051 0.021428571 0.0053002821 2.015395 UUUUUU AAUAAA,AUAAAA,AUAAAC,GAUAAA,UUUUUU
HNRNPAB 2 351 0.007142857 0.0017734784 2.009919 ACAAAG,CAAAGA AAAGAC,AAGACA,ACAAAG,AGACAA,AUAGCA,CAAAGA,GACAAA
PABPC5 4 596 0.011904762 0.0030078597 1.984730 AGAAAA,AGAAAU,GAAAAU,GAAAGU AGAAAA,AGAAAG,AGAAAU,GAAAAU,GAAAGU,GAAAUU
NOVA2 11 1434 0.028571429 0.0072299476 1.982516 AGGCAU,AGUCAU,GAGUCA,UUUUUU AACACC,ACCACC,AGACAU,AGAUCA,AGCACC,AGGCAU,AGUCAU,AUCAAC,AUCACC,AUCAUC,CCUAGA,CUAGAU,GAGACA,GAGGCA,GAGUCA,GAUCAC,GGGGGG,UAGAUC,UUUUUU
HNRNPLL 5 748 0.014285714 0.0037736800 1.920529 ACACAC,ACUGCA,CACACA ACAAAC,ACACAC,ACACCA,ACAUAC,ACCACA,ACCGCA,ACGACA,ACUGCA,AGACGA,CAAACA,CACACA,CACACC,CACCAC,CACCGC,CACUGC,CAGACG,CAUACA,GACGAC,GCAAAC,GCACAC,GCAUAC
RBM41 3 502 0.009523810 0.0025342604 1.909974 AUACUU,UACAUU,UACUUU AUACAU,AUACUU,UACAUG,UACAUU,UACUUG,UACUUU,UUACAU,UUACUU
HNRNPU 8 1136 0.021428571 0.0057285369 1.903297 UUUUUU AAAAAA,CCCCCC,GGGGGG,UUUUUU
NOVA1 10 1428 0.026190476 0.0071997179 1.863030 AGUCAC,CAGUCA,UUUUUU AACACC,ACCACC,AGCACC,AGUCAC,AUCAAC,AUCACC,AUCAUC,AUUCAU,CAGUCA,CAUUCA,CCCCCC,GGGGGG,UCAGUC,UCAUUC,UUCAUU,UUUUUU
RBM3 3 541 0.009523810 0.0027307537 1.802240 AAAACU,AAUACU,AUACUA AAAACG,AAAACU,AAACGA,AAACUA,AAGACG,AAGACU,AAUACG,AAUACU,AGACGA,AGACUA,AUACGA,AUACUA,GAAACG,GAAACU,GAGACG,GAGACU,GAUACG,GAUACU
ELAVL1 22 3309 0.054761905 0.0166767432 1.715335 UAGUUU,UGGUUU,UGUUUU,UUAGUU,UUAUUU,UUGGUU,UUGUUU,UUUGUU,UUUUUG,UUUUUU AUUUAU,CCCCCC,UAGUUU,UAUUUA,UAUUUU,UGAUUU,UGGUUU,UGUUUU,UUAGUU,UUAUUU,UUGAUU,UUGGUU,UUGUUU,UUUAGU,UUUAUU,UUUGGU,UUUGUU,UUUUUG,UUUUUU
SNRPB2 1 288 0.004761905 0.0014560661 1.709463 UGCAGU AUUGCA,GUAUUG,UAUUGC,UGCAGU,UUGCAG
KHDRBS1 12 1945 0.030952381 0.0098045143 1.658532 CUAAAA,GAAAAC,UAAAAC,UUUUAC,UUUUUU AUAAAA,AUUUAA,AUUUAC,CAAAAU,CUAAAA,CUAAAU,GAAAAC,UAAAAA,UAAAAC,UAAAAG,UUAAAA,UUAAAU,UUUUAC,UUUUUU
NELFE 6 1059 0.016666667 0.0053405885 1.641895 CUCUCU,CUGGCU,GGUUAG,UCUCUC,UCUGGC,UGGUUA CUCUCU,CUCUGG,CUGGCU,CUGGUU,GCUAAC,GGCUAA,GGUCUC,GGUUAG,GUCUCU,UCUCUC,UCUCUG,UCUGGC,UCUGGU,UGGCUA,UGGUUA
ZNF638 3 646 0.009523810 0.0032597743 1.546767 CGUUGG,GUUGGU,GUUGUU CGUUCG,CGUUCU,CGUUGG,CGUUGU,GGUUCG,GGUUCU,GGUUGG,GGUUGU,GUUCGU,GUUCUU,GUUGGU,GUUGUU,UGUUCG,UGUUCU,UGUUGG,UGUUGU
KHDRBS3 9 1646 0.023809524 0.0082980653 1.520692 UAAAAC,UUUUUU AAAUAA,AAUAAA,AGAUAA,AUAAAA,AUAAAC,AUAAAG,AUUAAA,GAUAAA,UAAAAC,UAAAUA,UUAAAC,UUUUUU
IGF2BP3 7 1348 0.019047619 0.0067966546 1.486714 AAAACA,AAAUAC,ACACAC,ACACUC,CACACA,CACUCA AAAAAC,AAAACA,AAAAUC,AAACAC,AAACUC,AAAUAC,AAAUCA,AAAUUC,AACACA,AACUCA,AAUACA,AAUUCA,ACAAAC,ACAAUC,ACACAC,ACACUC,ACAUAC,ACAUUC,CAAACA,CAAUCA,CACACA,CACUCA,CAUACA,CAUUCA
TIA1 29 5140 0.071428571 0.0259018541 1.463446 AUUUUG,AUUUUU,CCUUUC,CUUUUU,GUUUUC,GUUUUU,UCCUUU,UUAUUU,UUUUCU,UUUUGU,UUUUUA,UUUUUC,UUUUUG,UUUUUU AUUUUC,AUUUUG,AUUUUU,CCUUUC,CUCCUU,CUUUUA,CUUUUC,CUUUUG,CUUUUU,GUUUUA,GUUUUC,GUUUUG,GUUUUU,UAUUUU,UCCUUU,UCUCCU,UUAUUU,UUCUCC,UUUAUU,UUUUAU,UUUUCG,UUUUCU,UUUUGG,UUUUGU,UUUUUA,UUUUUC,UUUUUG,UUUUUU
QKI 4 904 0.011904762 0.0045596534 1.384543 ACACAC,AUUAAC,CACACU AAUCAU,ACACAC,ACACUA,ACUAAC,ACUAAU,ACUCAU,ACUUAU,AUCAUA,AUCUAA,AUCUAC,AUUAAC,CACACU,CACUAA,CUAACA,CUAACC,CUAACG,CUAAUC,CUACUC,CUCAUA,UAACCU,UAAUCA,UACUCA,UCAUAU,UCUAAU,UCUACU
SF1 6 1294 0.016666667 0.0065245869 1.353007 ACAGUC,AUACUA,AUUAAC,CAGUCA,UACUAA,UAUACU ACAGAC,ACAGUC,ACCGAC,ACGAAC,ACUAAC,ACUAAG,ACUAAU,ACUAGC,ACUGAC,ACUUAU,AGUAAC,AGUAAG,AUACUA,AUUAAC,CACAGA,CACCGA,CACUGA,CAGUCA,CGCUGA,CUAACA,GACUAA,GCUAAC,GCUGAC,GCUGCC,UAACAA,UACGAA,UACUAA,UACUAG,UACUGA,UAGUAA,UAUACU,UGCUAA,UGCUGA,UGCUGC
ENOX1 3 756 0.009523810 0.0038139863 1.320239 AGUACA,GUACAG AAGACA,AAUACA,AGACAG,AGGACA,AGUACA,AUACAG,CAGACA,CAUACA,CGGACA,CGUACA,GGACAG,GUACAG,UAGACA,UAUACA,UGGACA,UGUACA
FUS 8 1711 0.021428571 0.0086255542 1.312847 UUUUUU AAAAAA,CGGUGA,CGGUGG,GGGGGG,GGGUGA,GGGUGC,GGGUGG,GGGUGU,UGGUGA,UGGUGG,UGGUGU,UUUUUU
ELAVL3 9 1928 0.023809524 0.0097188634 1.292679 UUAUUU,UUUUUU AUUUAU,AUUUUA,UAUUUA,UAUUUU,UUAUUU,UUUAUU,UUUUUU
TIAL1 28 5597 0.069047619 0.0282043531 1.291674 AAUUUU,AUUUUG,AUUUUU,CUUUUU,GUUUUC,GUUUUU,UUAUUU,UUUCAG,UUUUAA,UUUUCA,UUUUUA,UUUUUC,UUUUUG,UUUUUU AAAUUU,AAUUUU,AGUUUU,AUUUUA,AUUUUC,AUUUUG,AUUUUU,CAGUUU,CUUUUA,CUUUUC,CUUUUG,CUUUUU,GUUUUC,GUUUUU,UAAAUU,UAUUUU,UCAGUU,UUAAAU,UUAUUU,UUCAGU,UUUAAA,UUUAUU,UUUCAG,UUUUAA,UUUUAU,UUUUCA,UUUUUA,UUUUUC,UUUUUG,UUUUUU
SART3 3 777 0.009523810 0.0039197904 1.280762 AGAAAA,GAAAAA,GAAAAC AAAAAA,AAAAAC,AGAAAA,GAAAAA,GAAAAC
HNRNPL 6 1419 0.016666667 0.0071543732 1.220068 AAACAA,AAAUAC,ACACAC,CACAAC,CACACA AAACAA,AAACAC,AAAUAA,AAAUAC,AACAAA,AACACA,AAUAAA,AAUACA,ACACAA,ACACAC,ACACCA,ACACGA,ACAUAA,ACAUAC,ACCACA,CACAAA,CACAAC,CACAAG,CACACA,CACACC,CACCAC,CACGAA,CACGAC,CACGAG,CAUAAA,CAUACA
YTHDC1 5 1254 0.014285714 0.0063230552 1.175879 GACUGC,UACUGC,UAGUAC,UCCUGC,UGAUGC GAAUAC,GAAUGC,GACUAC,GACUGC,GAGUAC,GAGUGC,GCAUAC,GCAUGC,GCCUAC,GCCUGC,GCGUAC,GCGUGC,GGAUAC,GGAUGC,GGCUAC,GGCUGC,GGGUAC,GGGUGC,UAAUAC,UAAUGC,UACUAC,UACUGC,UAGUAC,UAGUGC,UCAUAC,UCAUGC,UCCUAC,UCCUGC,UCGUAC,UCGUGC,UGAUAC,UGAUGC,UGCUAC,UGCUGC,UGGUAC,UGGUGC
PTBP1 36 8003 0.088095238 0.0403264813 1.127337 ACUUUC,ACUUUU,AUUUUU,CCUUUC,CCUUUU,CUCUCU,CUCUUG,CUUUCC,CUUUUU,UACUUU,UAGCUG,UCUCUC,UCUUUC,UUAUUU,UUCCUU,UUCUCU,UUCUUU,UUUCUU,UUUUCC,UUUUCU,UUUUUC,UUUUUU ACUUUC,ACUUUU,AGCUGU,AUCUUC,AUUUUC,AUUUUU,CAUCUU,CCAUCU,CCCCCC,CCUCUU,CCUUCC,CCUUUC,CCUUUU,CUAUCU,CUCCAU,CUCCCC,CUCUCU,CUCUUA,CUCUUC,CUCUUG,CUCUUU,CUUCCU,CUUCUC,CUUCUU,CUUUCC,CUUUCU,CUUUUC,CUUUUU,GCUCCC,GCUGUG,GGCUCC,GGGGGG,GUCUUA,GUCUUU,UACUUU,UAGCUG,UAUUUU,UCCAUC,UCCCCC,UCCUCU,UCUAUC,UCUCUC,UCUCUU,UCUUCU,UCUUUC,UCUUUU,UUACUU,UUAUUU,UUCCCC,UUCCUU,UUCUCU,UUCUUC,UUCUUG,UUCUUU,UUUCCC,UUUCUU,UUUUCC,UUUUCU,UUUUUC,UUUUUU
IGF2BP2 9 2163 0.023809524 0.0109028617 1.126832 AAAACA,AAAUAC,ACACAC,ACACUC,CACACA,CACUCA,GAAAAC,GAACUC AAAAAC,AAAACA,AAAAUC,AAACAC,AAACUC,AAAUAC,AAAUCA,AAAUUC,AACACA,AACUCA,AAUACA,AAUUCA,ACAAAC,ACAAUC,ACACAC,ACACUC,ACAUAC,ACAUUC,CAAAAC,CAAACA,CAAAUC,CAACAC,CAACUC,CAAUAC,CAAUCA,CAAUUC,CACACA,CACUCA,CAUACA,CAUUCA,CCAAAC,CCAAUC,CCACAC,CCACUC,CCAUAC,CCAUUC,GAAAAC,GAAAUC,GAACAC,GAACUC,GAAUAC,GAAUUC,GCAAAC,GCAAUC,GCACAC,GCACUC,GCAUAC,GCAUUC

Help

  • Note:
    • foreground: number of motifs found in the foreground target sequences (e.g. predicted circRNAs).
    • background: number of motifs found in the background target sequences (e.g. randomly generated circRNAs).
    • foregroundNorm: number of motifs found in the foreground target sequences (+1) divided by the number (or length) of sequences analyzed.
    • backgroundNorm: number of motifs found in background target sequences (+1) divided by the number (or length) of sequences analyzed.
    • log2FC: log2 fold change calculated in this way (foregroundNorm)/(backgroundNorm).
    • motifF: motifs of the corresponding RBP found in the foreground sequences.
    • motifB: motifs of the corresponding RBP found in the background sequences.

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