O-GlcNAcylation regulates osteoblast differentiation through the morphological changes in mitochondria, cytoskeleton, and endoplasmic reticulum

Scripts to reproduce the analysis in this study:

• 01. Re-analysis of bulk RNA-seq (GSE138783)
• 02. Construct gene regulatory network by literature mining and GSE138783
• 03. Gene regulatory network
• 04. Find ER-Mitochondria coupling cadidate genes by literature mining with the above gene regulatory network

*Resulted files are deposited at Mendeley Data (DOI:10.17632/5ybkzhyp8y)*

*This work is already published in BioFactors*

The above code script is developed and mantained by Bioinformatics Study Group in Okayama University (BSGOU). BSGOU is an international academic community committed to advancing the digital transformation of biological and biomedical research. We unite students, researchers, clinicians, and engineers to collaboratively explore how high-throughput data and integrative computation can drive new theories, models, and discoveries in life sciences. For more information in details, please visit the homepage (https://labonom.github.io/) of BSGOU.