ENSG00000214765

1 Isoform Switch

Summary Plot
Results

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Rows: 1-8 / 8
Columns:
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isoform_id
gene_id
condition_1
condition_2
gene_name
gene_biotype
iso_biotype
gene_overall_mean
gene_value_1
gene_value_2
gene_stderr_1
gene_stderr_2
gene_log2_fold_change
iso_overall_mean
iso_value_1
iso_value_2
iso_stderr_1
iso_stderr_2
iso_log2_fold_change
IF_overall
IF1
IF2
dIF
isoform_switch_q_value
gene_switch_q_value
PTC
codingPotential
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isoform_id	gene_id	condition_1	condition_2	gene_name	gene_biotype	iso_biotype	gene_overall_mean	gene_value_1	gene_value_2	gene_stderr_1	gene_stderr_2	gene_log2_fold_change	iso_overall_mean	iso_value_1	iso_value_2	iso_stderr_1	iso_stderr_2	iso_log2_fold_change	IF_overall	IF1	IF2	dIF	isoform_switch_q_value	gene_switch_q_value	PTC	codingPotential

ENST00000413875	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	retained_intron	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	0.4708661	0.4590904	0.7801433	0.1494409	0.3085859	0.7522484	0.05223333	0.07796667	0.05703333	-0.020933333	0.8260576265	0.0002996265		FALSE
ENST00000428414	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	processed_transcript	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	0.4335605	0.2012710	0.7211265	0.2012710	0.3660217	1.7910265	0.05053333	0.04163333	0.05010000	0.008466667	0.8170492164	0.0002996265		FALSE
ENST00000429741	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	processed_transcript	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	1.2645199	1.1710199	1.2951536	0.3394955	0.4428933	0.1441864	0.15013333	0.20170000	0.09430000	-0.107400000	0.3067476379	0.0002996265		FALSE
ENST00000686085	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	processed_transcript	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	1.8937648	0.2966153	3.6059196	0.2966153	0.2762298	3.5598612	0.19495833	0.07513333	0.29263333	0.217500000	0.2392598637	0.0002996265		FALSE
ENST00000689506	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	processed_transcript	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	0.5461906	0.0000000	1.3702649	0.0000000	0.4040109	7.1088013	0.05183750	0.00000000	0.11416667	0.114166667	0.0002996265	0.0002996265		FALSE
ENST00000690171	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	processed_transcript	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	0.3540907	0.4960842	0.0000000	0.2655108	0.0000000	-5.6613055	0.04150833	0.08616667	0.00000000	-0.086166667	0.1923796601	0.0002996265		FALSE
ENST00000691119	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene	processed_transcript	9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	1.2291971	0.9089803	1.2508797	0.1944185	0.6897859	0.4563248	0.13565833	0.16626667	0.08816667	-0.078100000	0.7605036293	0.0002996265	FALSE	FALSE
MSTRG.29831.8	ENSG00000214765	HEK293_OSMI2_6hA	HEK293_TMG_6hB	SEPTIN7P2	transcribed_unprocessed_pseudogene		9.053512	5.639906	12.9272	1.275494	1.4778	1.195226	0.8405544	0.7859127	1.0623954	0.2778764	0.4673200	0.4301549	0.10093750	0.13476667	0.07630000	-0.058466667	0.7380576355	0.0002996265		FALSE

Note:
- The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

Rows: 1-10 / 40
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groupID
featureID
exonBaseMean
dispersion
pvalue
padj
seqnames
start
end
width
strand
HEK293_TMG_6hB
HEK293_OSMI2_6hA
log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
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groupID	featureID	exonBaseMean	dispersion	pvalue	padj	seqnames	start	end	width	strand	HEK293_TMG_6hB	HEK293_OSMI2_6hA	log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB

ENSG00000214765	E001	0.3032425	0.0244411696	0.108909089		7	45723780	45723783	4	-	0.000	0.271	13.087
ENSG00000214765	E002	0.3032425	0.0244411696	0.108909089		7	45723784	45723786	3	-	0.000	0.271	13.092
ENSG00000214765	E003	0.3032425	0.0244411696	0.108909089		7	45723787	45723787	1	-	0.000	0.271	13.092
ENSG00000214765	E004	0.5059767	0.0217681645	0.036427610		7	45723788	45723797	10	-	0.000	0.362	13.679
ENSG00000214765	E005	9.0196074	0.1733092008	0.727039920	0.85244477	7	45723798	45723919	122	-	0.963	1.036	0.269
ENSG00000214765	E006	21.9606677	0.3341996244	0.298339772	0.53877108	7	45723920	45724023	104	-	1.253	1.473	0.765
ENSG00000214765	E007	16.9562966	0.1739955902	0.029046033	0.12449052	7	45724050	45724352	303	-	1.003	1.479	1.685
ENSG00000214765	E008	25.5142941	0.3291234096	0.139044745	0.34605166	7	45724353	45724480	128	-	1.264	1.585	1.109
ENSG00000214765	E009	11.3199117	0.1448195416	0.061914992	0.20711950	7	45724481	45724569	89	-	0.899	1.290	1.417
ENSG00000214765	E010	20.4271674	0.3442929375	0.189918493	0.41684292	7	45724570	45724717	148	-	1.144	1.515	1.295
ENSG00000214765	E011	50.5833583	0.5169642062	0.118943177	0.31413155	7	45724718	45725715	998	-	1.483	1.922	1.489
ENSG00000214765	E012	10.6850712	0.1536233670	0.193725908	0.42176217	7	45726045	45726183	139	-	0.929	1.210	1.022
ENSG00000214765	E013	15.1731098	0.1972361922	0.039762288	0.15412209	7	45726184	45726236	53	-	0.996	1.408	1.464
ENSG00000214765	E014	6.7707255	0.1601113891	0.230108245	0.46526456	7	45726237	45726330	94	-	0.739	1.055	1.204
ENSG00000214765	E015	2.9956230	0.0984344632	0.384055820	0.61562427	7	45726331	45726332	2	-	0.498	0.727	1.015
ENSG00000214765	E016	65.9494130	0.7145873109	0.326150385	0.56532045	7	45726333	45726861	529	-	1.722	1.930	0.702
ENSG00000214765	E017	26.2770707	0.3519782630	0.177618476	0.40059634	7	45726862	45727318	457	-	1.292	1.583	1.002
ENSG00000214765	E018	15.4168957	0.2927224132	0.426597143	0.64850680	7	45727827	45727846	20	-	1.139	1.290	0.532
ENSG00000214765	E019	18.2918107	0.3906595882	0.463601515	0.67553549	7	45727847	45727909	63	-	1.213	1.353	0.491
ENSG00000214765	E020	14.6150214	0.2820182197	0.631093802	0.79110562	7	45727910	45727992	83	-	1.161	1.208	0.169
ENSG00000214765	E021	10.0726557	0.1570628280	0.452375650	0.66744097	7	45727993	45728056	64	-	0.968	1.131	0.595
ENSG00000214765	E022	9.6395406	0.2368876198	0.884553801	0.94370225	7	45728057	45728177	121	-	0.998	1.044	0.169
ENSG00000214765	E023	56.4094591	0.6858875233	0.413249959	0.63853973	7	45728178	45728313	136	-	1.687	1.825	0.466
ENSG00000214765	E024	1.1909328	0.0153787590	0.842329132		7	45728605	45728831	227	-	0.292	0.363	0.446
ENSG00000214765	E025	10.8395110	0.0038708213	0.121681134	0.31851926	7	45728832	45729026	195	-	0.983	1.197	0.774
ENSG00000214765	E026	59.6211881	0.0007475386	0.031187493	0.13089051	7	45736787	45736910	124	-	1.786	1.749	-0.123
ENSG00000214765	E027	0.7007164	0.6943479034	0.873678151		7	45739380	45739515	136	-	0.175	0.277	0.841
ENSG00000214765	E028	40.6258608	0.0339457504	0.122051088	0.31911838	7	45744997	45745048	52	-	1.634	1.544	-0.308
ENSG00000214765	E029	4.7535261	0.0059165320	0.422142491	0.64526662	7	45746827	45746948	122	-	0.684	0.850	0.666
ENSG00000214765	E030	50.8594999	0.0777311552	0.048060166	0.17512545	7	45747215	45747311	97	-	1.761	1.562	-0.678
ENSG00000214765	E031	49.4241479	0.0953498397	0.141488594	0.34971762	7	45748626	45748714	89	-	1.735	1.585	-0.509
ENSG00000214765	E032	51.7123059	0.0356805935	0.005749985	0.03849561	7	45751529	45751646	118	-	1.771	1.562	-0.709
ENSG00000214765	E033	43.8037904	0.0332527081	0.028638658	0.12328896	7	45756909	45756992	84	-	1.681	1.537	-0.493
ENSG00000214765	E034	0.5008152	0.0644973806	0.192493354		7	45757984	45758042	59	-	0.236	0.000	-12.001
ENSG00000214765	E035	39.5842539	0.0398501160	0.022743886	0.10510027	7	45758043	45758110	68	-	1.641	1.484	-0.537
ENSG00000214765	E036	40.3268295	0.0593696744	0.097942420	0.27817895	7	45758111	45758177	67	-	1.632	1.531	-0.347
ENSG00000214765	E037	34.0284441	0.0692825263	0.069572906	0.22390597	7	45759074	45759174	101	-	1.576	1.421	-0.533
ENSG00000214765	E038	2.9495712	0.1398169603	0.837079238	0.91781197	7	45759175	45759472	298	-	0.558	0.615	0.254
ENSG00000214765	E039	2.1056726	0.0101650052	0.536921792	0.72697582	7	45765706	45765812	107	-	0.499	0.438	-0.310
ENSG00000214765	E040	31.9675388	0.0776421344	0.187738537	0.41403462	7	45768660	45769042	383	-	1.536	1.433	-0.353

Isoforom Switch Analysis

WANG Ziyi

Date: 19 5月 2022

ENSG00000214765

1 Isoform Switch

TableFilter v0.7.3

2 Differential Exon Usage

TableFilter v0.7.3