ENSG00000198793

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000361445 ENSG00000198793 HEK293_OSMI2_6hA HEK293_TMG_6hB MTOR protein_coding protein_coding 33.6973 45.69051 29.24617 4.51819 0.616675 -0.6434693 19.76971 25.59435 22.480163 2.434976 0.6055288 -0.1870949 0.6068875 0.5609333 0.7684667 0.2075333 7.976024e-09 7.976024e-09 FALSE TRUE
ENST00000376838 ENSG00000198793 HEK293_OSMI2_6hA HEK293_TMG_6hB MTOR protein_coding protein_coding 33.6973 45.69051 29.24617 4.51819 0.616675 -0.6434693 10.26725 17.22077 3.645064 2.871508 0.1110028 -2.2370188 0.2812458 0.3714667 0.1249333 -0.2465333 2.888776e-08 7.976024e-09 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000198793 E001 699.7063938 0.0001250964 1.071914e-27 7.252416e-25 1 11106535 11107018 484 - 2.715 2.882 0.558
ENSG00000198793 E002 293.2677766 0.0001867951 1.988252e-09 1.096269e-07 1 11107019 11107056 38 - 2.358 2.498 0.467
ENSG00000198793 E003 631.3323554 0.0040998553 1.256086e-03 1.183424e-02 1 11107057 11107284 228 - 2.706 2.822 0.386
ENSG00000198793 E004 225.0668414 0.0139244122 5.496469e-01 7.360423e-01 1 11107285 11107306 22 - 2.305 2.353 0.161
ENSG00000198793 E005 471.2150739 0.0055188041 1.734265e-01 3.951190e-01 1 11107307 11107500 194 - 2.616 2.677 0.204
ENSG00000198793 E006 326.7329145 0.0006486463 1.461822e-01 3.566773e-01 1 11108181 11108286 106 - 2.473 2.512 0.129
ENSG00000198793 E007 175.6970704 0.0002784995 9.321627e-03 5.518464e-02 1 11109290 11109302 13 - 2.177 2.255 0.262
ENSG00000198793 E008 286.5328078 0.0001850790 1.436024e-01 3.527864e-01 1 11109303 11109370 68 - 2.417 2.453 0.121
ENSG00000198793 E009 313.3963063 0.0002306325 9.358402e-02 2.703855e-01 1 11109649 11109729 81 - 2.454 2.494 0.134
ENSG00000198793 E010 5.5486780 0.2135586994 9.387571e-01 9.716752e-01 1 11111514 11111753 240 - 0.792 0.791 -0.005
ENSG00000198793 E011 292.6156383 0.0011620130 2.226985e-02 1.034955e-01 1 11112852 11112917 66 - 2.407 2.474 0.221
ENSG00000198793 E012 385.6261412 0.0001582412 3.772722e-03 2.786721e-02 1 11114318 11114453 136 - 2.532 2.592 0.201
ENSG00000198793 E013 2.3760685 0.0298933014 6.711328e-01 8.170457e-01 1 11114454 11114629 176 - 0.548 0.475 -0.354
ENSG00000198793 E014 276.4133204 0.0001881506 2.516158e-02 1.127028e-01 1 11114813 11114887 75 - 2.390 2.445 0.183
ENSG00000198793 E015 289.0724953 0.0016791603 4.655409e-04 5.360344e-03 1 11115396 11115468 73 - 2.373 2.479 0.353
ENSG00000198793 E016 5.8497094 0.0470395764 9.535975e-01 9.787073e-01 1 11115469 11115663 195 - 0.812 0.825 0.051
ENSG00000198793 E017 278.7695844 0.0001888345 9.886833e-05 1.480349e-03 1 11117004 11117086 83 - 2.368 2.461 0.310
ENSG00000198793 E018 352.4997307 0.0013088280 2.400588e-03 1.968779e-02 1 11121246 11121368 123 - 2.477 2.560 0.275
ENSG00000198793 E019 394.9405748 0.0001979561 1.362399e-01 3.417315e-01 1 11121979 11122126 148 - 2.561 2.593 0.108
ENSG00000198793 E020 369.4184588 0.0001832388 3.237440e-02 1.343118e-01 1 11124498 11124633 136 - 2.523 2.569 0.154
ENSG00000198793 E021 366.4791973 0.0004177958 5.121013e-06 1.175542e-04 1 11126622 11126796 175 - 2.480 2.583 0.343
ENSG00000198793 E022 323.2412419 0.0001760257 8.233806e-02 2.493739e-01 1 11127010 11127144 135 - 2.467 2.507 0.135
ENSG00000198793 E023 380.0601614 0.0004837365 4.741678e-01 6.829501e-01 1 11127624 11127806 183 - 2.550 2.568 0.062
ENSG00000198793 E024 219.7867381 0.0028175344 6.438791e-01 7.994493e-01 1 11128004 11128041 38 - 2.311 2.333 0.071
ENSG00000198793 E025 283.1914306 0.0001821635 7.294124e-02 2.307209e-01 1 11128042 11128126 85 - 2.407 2.451 0.147
ENSG00000198793 E026 276.2692803 0.0002253910 2.809465e-02 1.215541e-01 1 11128454 11128552 99 - 2.391 2.446 0.181
ENSG00000198793 E027 229.3479466 0.0002017121 2.647438e-01 5.040425e-01 1 11128855 11128951 97 - 2.325 2.356 0.105
ENSG00000198793 E028 234.0935930 0.0002113274 7.136613e-01 8.441558e-01 1 11129738 11129838 101 - 2.358 2.353 -0.018
ENSG00000198793 E029 288.7272654 0.0008751839 1.249318e-01 3.236257e-01 1 11130529 11130777 249 - 2.419 2.462 0.143
ENSG00000198793 E030 12.3539248 0.2366590917 5.334749e-01 7.245317e-01 1 11130778 11131558 781 - 1.176 1.067 -0.388
ENSG00000198793 E031 31.4489993 0.0226471981 1.126689e-01 3.036139e-01 1 11131594 11133079 1486 - 1.588 1.434 -0.530
ENSG00000198793 E032 177.1340375 0.0003255644 8.533975e-02 2.552692e-01 1 11133080 11133197 118 - 2.199 2.253 0.178
ENSG00000198793 E033 212.0308399 0.0002489307 8.205203e-01 9.084011e-01 1 11134351 11134466 116 - 2.305 2.315 0.033
ENSG00000198793 E034 1.7485666 0.2280265651 1.360545e-01 3.414245e-01 1 11138954 11139303 350 - 0.154 0.517 2.424
ENSG00000198793 E035 230.4648286 0.0002421592 1.999921e-01 4.296700e-01 1 11139304 11139435 132 - 2.326 2.362 0.120
ENSG00000198793 E036 191.3474547 0.0124786570 8.982906e-02 2.634757e-01 1 11139533 11139658 126 - 2.201 2.303 0.343
ENSG00000198793 E037 0.3393995 0.0274424043 9.036488e-02   1 11139659 11139660 2 - 0.266 0.000 -11.211
ENSG00000198793 E038 164.7118886 0.2200897971 1.327137e-01 3.360713e-01 1 11144648 11144755 108 - 2.019 2.281 0.877
ENSG00000198793 E039 1.5174529 0.0206287860 2.714064e-01 5.113425e-01 1 11144756 11144967 212 - 0.266 0.472 1.217
ENSG00000198793 E040 148.8964757 0.0505040665 4.536235e-02 1.684835e-01 1 11144968 11145045 78 - 2.012 2.225 0.713
ENSG00000198793 E041 174.8132826 0.0069234026 2.998045e-02 1.272811e-01 1 11146676 11146791 116 - 2.155 2.266 0.373
ENSG00000198793 E042 133.5253771 0.0004060514 6.976479e-01 8.340020e-01 1 11150126 11150226 101 - 2.101 2.117 0.055
ENSG00000198793 E043 169.5899501 0.0014266435 4.963194e-01 6.984235e-01 1 11157152 11157291 140 - 2.225 2.206 -0.064
ENSG00000198793 E044 128.4864594 0.0020464091 4.234549e-01 6.462181e-01 1 11167442 11167517 76 - 2.111 2.083 -0.093
ENSG00000198793 E045 194.7013675 0.0002519489 4.537185e-03 3.213439e-02 1 11199258 11199403 146 - 2.319 2.248 -0.238
ENSG00000198793 E046 214.4163373 0.0002990375 1.317298e-02 7.113569e-02 1 11199541 11199703 163 - 2.353 2.293 -0.201
ENSG00000198793 E047 195.1294039 0.0013633232 1.478287e-01 3.592033e-01 1 11204561 11204703 143 - 2.300 2.257 -0.144
ENSG00000198793 E048 204.5687033 0.0006546015 1.319360e-04 1.884580e-03 1 11209312 11209458 147 - 2.356 2.253 -0.344
ENSG00000198793 E049 171.7218894 0.0002484604 7.872909e-07 2.307561e-05 1 11210814 11210906 93 - 2.300 2.167 -0.448
ENSG00000198793 E050 243.6852230 0.0008205297 1.078765e-04 1.592897e-03 1 11212312 11212474 163 - 2.434 2.335 -0.332
ENSG00000198793 E051 186.2120022 0.0028274487 5.761660e-02 1.974420e-01 1 11212796 11212908 113 - 2.299 2.232 -0.225
ENSG00000198793 E052 202.0056472 0.0012290740 4.371677e-03 3.121605e-02 1 11213399 11213566 168 - 2.343 2.260 -0.277
ENSG00000198793 E053 168.8446571 0.0003089282 2.438963e-04 3.152626e-03 1 11216148 11216234 87 - 2.277 2.176 -0.335
ENSG00000198793 E054 301.2830121 0.0008658321 1.085356e-06 3.051123e-05 1 11228668 11228918 251 - 2.533 2.415 -0.396
ENSG00000198793 E055 218.0415609 0.0002589537 5.792010e-08 2.275836e-06 1 11230925 11231054 130 - 2.402 2.269 -0.442
ENSG00000198793 E056 208.7053194 0.0002403267 1.883148e-08 8.315179e-07 1 11231300 11231434 135 - 2.390 2.251 -0.462
ENSG00000198793 E057 161.7978839 0.0002928748 3.166186e-05 5.655740e-04 1 11232436 11232528 93 - 2.266 2.150 -0.388
ENSG00000198793 E058 139.5107214 0.0003887170 2.529799e-04 3.251317e-03 1 11233398 11233487 90 - 2.196 2.085 -0.371
ENSG00000198793 E059 134.9582604 0.0003200240 2.857918e-04 3.585817e-03 1 11234143 11234265 123 - 2.182 2.071 -0.371
ENSG00000198793 E060 166.4829320 0.0003021514 7.018339e-08 2.702665e-06 1 11237843 11238048 206 - 2.297 2.148 -0.499
ENSG00000198793 E061 176.4296094 0.0055921223 1.385332e-03 1.279428e-02 1 11238402 11238617 216 - 2.318 2.178 -0.469
ENSG00000198793 E062 184.4539133 0.0066600741 6.625871e-02 2.166395e-01 1 11240303 11240547 245 - 2.305 2.219 -0.289
ENSG00000198793 E063 122.9472404 0.0051420427 1.325624e-02 7.146488e-02 1 11241553 11241681 129 - 2.147 2.030 -0.391
ENSG00000198793 E064 169.8272964 0.0007059705 2.190712e-10 1.445351e-08 1 11243114 11243300 187 - 2.324 2.138 -0.621
ENSG00000198793 E065 134.9466251 0.0004028668 5.214055e-10 3.203569e-08 1 11247625 11247733 109 - 2.228 2.035 -0.645
ENSG00000198793 E066 240.5398447 0.0048436591 2.287324e-06 5.871224e-05 1 11247819 11248094 276 - 2.478 2.287 -0.638
ENSG00000198793 E067 184.9171937 0.0078185899 2.199406e-06 5.672990e-05 1 11253839 11253973 135 - 2.388 2.153 -0.787
ENSG00000198793 E068 187.9059695 0.0064916402 3.954037e-04 4.686206e-03 1 11255992 11256192 201 - 2.358 2.194 -0.550
ENSG00000198793 E069 190.8531745 0.0037884592 2.885121e-05 5.216223e-04 1 11256933 11257165 233 - 2.363 2.201 -0.542
ENSG00000198793 E070 117.5707250 0.0031691612 3.614331e-06 8.701397e-05 1 11258485 11258593 109 - 2.171 1.978 -0.645
ENSG00000198793 E071 117.4038914 0.0003368328 2.821212e-04 3.550211e-03 1 11259248 11259423 176 - 2.128 2.009 -0.397
ENSG00000198793 E072 2.5108808 0.1145041384 8.846559e-01 9.437341e-01 1 11259424 11259450 27 - 0.546 0.515 -0.146
ENSG00000198793 E073 3.0625724 0.0119922172 7.072639e-02 2.261910e-01 1 11262222 11262444 223 - 0.752 0.473 -1.238
ENSG00000198793 E074 49.4867062 0.0008940711 6.219242e-01 7.851039e-01 1 11262445 11262552 108 - 1.673 1.703 0.101
ENSG00000198793 E075 0.3393995 0.0274424043 9.036488e-02   1 11262763 11262916 154 - 0.266 0.000 -11.211
ENSG00000198793 E076 0.7392585 0.0739253330 6.278907e-01   1 11273196 11274139 944 - 0.153 0.242 0.822