ENSG00000197694

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000358161 ENSG00000197694 HEK293_OSMI2_6hA HEK293_TMG_6hB SPTAN1 protein_coding protein_coding 74.88423 104.8541 62.1487 6.997925 1.011687 -0.7544921 30.898544 41.204052 32.970577 5.9530330 1.9974889 -0.32151966 0.43647917 0.38863333 0.53180000 0.14316667 3.119327e-01 1.758321e-05 FALSE TRUE
ENST00000372731 ENSG00000197694 HEK293_OSMI2_6hA HEK293_TMG_6hB SPTAN1 protein_coding protein_coding 74.88423 104.8541 62.1487 6.997925 1.011687 -0.7544921 8.666962 10.933167 10.775715 0.9783994 0.8973598 -0.02090861 0.12108333 0.10403333 0.17316667 0.06913333 1.874108e-02 1.758321e-05 FALSE TRUE
ENST00000625980 ENSG00000197694 HEK293_OSMI2_6hA HEK293_TMG_6hB SPTAN1 protein_coding retained_intron 74.88423 104.8541 62.1487 6.997925 1.011687 -0.7544921 4.355810 6.005465 2.529447 1.0351833 0.4479987 -1.24416178 0.05545417 0.05916667 0.04053333 -0.01863333 7.583076e-01 1.758321e-05 FALSE TRUE
MSTRG.33475.36 ENSG00000197694 HEK293_OSMI2_6hA HEK293_TMG_6hB SPTAN1 protein_coding   74.88423 104.8541 62.1487 6.997925 1.011687 -0.7544921 14.716707 25.176474 1.859193 6.3739422 0.3824985 -3.75216204 0.16306667 0.23413333 0.02983333 -0.20430000 1.758321e-05 1.758321e-05 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000197694 E001 0.8206259 0.0211647433 2.918936e-01   9 128552558 128552586 29 + 0.345 0.180 -1.237
ENSG00000197694 E002 0.9986097 0.1137910483 1.768253e-01   9 128552587 128552589 3 + 0.421 0.180 -1.672
ENSG00000197694 E003 1.3380092 0.1636023156 6.903894e-02   9 128552590 128552592 3 + 0.541 0.180 -2.272
ENSG00000197694 E004 5.7666652 0.0228456723 1.258639e-02 6.878607e-02 9 128552593 128552597 5 + 0.978 0.664 -1.234
ENSG00000197694 E005 12.7390829 0.0052398823 3.914230e-02 1.525266e-01 9 128552598 128552602 5 + 1.214 1.054 -0.574
ENSG00000197694 E006 159.3393180 0.0062155257 1.436335e-07 5.138460e-06 9 128552603 128552696 94 + 2.310 2.103 -0.690
ENSG00000197694 E007 4.3883288 0.0066523975 3.406559e-03 2.579924e-02 9 128552746 128552805 60 + 0.345 0.856 2.351
ENSG00000197694 E008 5.6130181 0.0049542248 1.136391e-01 3.052068e-01 9 128552969 128553031 63 + 0.627 0.887 1.052
ENSG00000197694 E009 12.0496262 0.0166375347 1.538712e-01 3.678646e-01 9 128553081 128553146 66 + 0.960 1.167 0.755
ENSG00000197694 E010 15.5168026 0.0328627163 3.042195e-01 5.448009e-01 9 128553147 128553311 165 + 1.093 1.258 0.585
ENSG00000197694 E011 1.0157254 0.4908602802 5.671167e-01   9 128553312 128553321 10 + 0.348 0.254 -0.631
ENSG00000197694 E012 0.5227326 0.3905048002 1.000000e+00   9 128553322 128553331 10 + 0.149 0.183 0.357
ENSG00000197694 E013 0.5474829 0.1251636418 2.221342e-01   9 128553332 128553362 31 + 0.000 0.252 11.505
ENSG00000197694 E014 0.5778428 0.1175270270 2.210241e-01   9 128553363 128553382 20 + 0.000 0.252 11.511
ENSG00000197694 E015 0.1614157 0.0332664180 2.860233e-01   9 128555349 128555399 51 + 0.147 0.000 -11.231
ENSG00000197694 E016 90.4330926 0.0168428469 1.586174e-06 4.254087e-05 9 128566738 128566740 3 + 2.114 1.807 -1.031
ENSG00000197694 E017 314.7884357 0.0026279794 1.975579e-23 8.558642e-21 9 128566741 128566977 237 + 2.637 2.362 -0.914
ENSG00000197694 E018 258.3528884 0.0072654733 1.775047e-12 1.743458e-10 9 128568772 128568897 126 + 2.558 2.267 -0.971
ENSG00000197694 E019 0.3751086 0.0272979729 3.938301e-01   9 128572756 128572824 69 + 0.000 0.181 10.903
ENSG00000197694 E020 300.8927050 0.0064904915 3.278832e-13 3.694898e-11 9 128574675 128574815 141 + 2.620 2.340 -0.932
ENSG00000197694 E021 274.4797131 0.0055869841 7.962615e-13 8.301014e-11 9 128575199 128575345 147 + 2.571 2.311 -0.865
ENSG00000197694 E022 262.7325851 0.0017067055 8.093320e-16 1.378568e-13 9 128576823 128576956 134 + 2.520 2.327 -0.643
ENSG00000197694 E023 280.5582749 0.0078733894 6.283122e-07 1.894956e-05 9 128577129 128577273 145 + 2.550 2.352 -0.660
ENSG00000197694 E024 299.3787596 0.0047455123 7.636841e-08 2.916373e-06 9 128577352 128577506 155 + 2.563 2.393 -0.566
ENSG00000197694 E025 293.2942446 0.0024062227 6.118072e-14 7.931217e-12 9 128578110 128578245 136 + 2.566 2.373 -0.644
ENSG00000197694 E026 226.0591443 0.0022612546 9.377625e-15 1.384814e-12 9 128579637 128579738 102 + 2.462 2.251 -0.706
ENSG00000197694 E027 124.6757600 0.0004016884 1.315144e-12 1.318428e-10 9 128580922 128580952 31 + 2.195 2.009 -0.620
ENSG00000197694 E028 215.9983332 0.0005468792 2.560613e-16 4.616252e-14 9 128580953 128581059 107 + 2.424 2.255 -0.564
ENSG00000197694 E029 242.6315922 0.0032489452 2.393634e-10 1.565848e-08 9 128581782 128581892 111 + 2.479 2.296 -0.612
ENSG00000197694 E030 0.3088520 0.0266254182 6.822847e-01   9 128581893 128581946 54 + 0.147 0.099 -0.653
ENSG00000197694 E031 211.9735912 0.0028958105 1.820892e-13 2.151909e-11 9 128582479 128582556 78 + 2.438 2.219 -0.731
ENSG00000197694 E032 314.4563387 0.0042215269 4.620615e-11 3.512474e-09 9 128582694 128582849 156 + 2.602 2.397 -0.681
ENSG00000197694 E033 416.3414402 0.0018777533 1.953741e-21 6.785075e-19 9 128583077 128583281 205 + 2.729 2.515 -0.714
ENSG00000197694 E034 396.6704509 0.0011272182 4.290864e-22 1.605038e-19 9 128583788 128583969 182 + 2.696 2.509 -0.622
ENSG00000197694 E035 492.2126751 0.0029893352 2.570447e-08 1.100103e-06 9 128584282 128584525 244 + 2.757 2.628 -0.429
ENSG00000197694 E036 348.5839288 0.0061399409 7.896947e-04 8.196338e-03 9 128584721 128584843 123 + 2.591 2.492 -0.332
ENSG00000197694 E037 481.7877336 0.0015307491 1.064549e-10 7.507681e-09 9 128585748 128585965 218 + 2.741 2.624 -0.389
ENSG00000197694 E038 312.2272171 0.0001907396 1.274765e-23 5.593915e-21 9 128587606 128587698 93 + 2.579 2.416 -0.542
ENSG00000197694 E039 390.4946598 0.0009343177 1.557556e-13 1.862739e-11 9 128588809 128588943 135 + 2.657 2.531 -0.420
ENSG00000197694 E040 319.3985893 0.0004557670 1.487877e-10 1.018854e-08 9 128591477 128591579 103 + 2.554 2.457 -0.322
ENSG00000197694 E041 231.2263012 0.0001921259 3.731783e-07 1.195443e-05 9 128591580 128591625 46 + 2.401 2.325 -0.255
ENSG00000197694 E042 52.2861814 0.0045351537 4.431174e-01 6.608066e-01 9 128592983 128592983 1 + 1.715 1.714 -0.006
ENSG00000197694 E043 93.7893755 0.0055664633 2.747027e-02 1.197096e-01 9 128592984 128593042 59 + 2.007 1.937 -0.238
ENSG00000197694 E044 88.9871696 0.1540200982 6.156544e-02 2.063078e-01 9 128593043 128594121 1079 + 2.083 1.824 -0.871
ENSG00000197694 E045 22.7775521 0.1472317489 1.747786e-01 3.968669e-01 9 128594122 128594174 53 + 1.467 1.285 -0.632
ENSG00000197694 E046 496.9678268 0.0020709413 1.746875e-06 4.630242e-05 9 128594175 128594373 199 + 2.737 2.650 -0.291
ENSG00000197694 E047 383.3111046 0.0003299854 9.148224e-13 9.438511e-11 9 128598400 128598485 86 + 2.630 2.533 -0.325
ENSG00000197694 E048 231.5384317 0.0019899456 4.114984e-06 9.730143e-05 9 128598486 128598504 19 + 2.415 2.312 -0.343
ENSG00000197694 E049 1.1937092 0.6069606313 4.594126e-01   9 128598505 128598726 222 + 0.425 0.254 -1.061
ENSG00000197694 E050 225.3905015 0.0013774182 3.424992e-06 8.322256e-05 9 128598963 128598986 24 + 2.398 2.305 -0.311
ENSG00000197694 E051 34.2023760 0.0563630252 2.000270e-02 9.589586e-02 9 128598987 128599963 977 + 1.670 1.421 -0.853
ENSG00000197694 E052 21.5416605 0.0379383369 3.288717e-02 1.357427e-01 9 128599964 128600079 116 + 1.456 1.246 -0.732
ENSG00000197694 E053 231.5147174 0.0007945649 3.440177e-06 8.355566e-05 9 128600080 128600115 36 + 2.404 2.324 -0.266
ENSG00000197694 E054 0.3503582 0.0310083378 6.870680e-01   9 128601345 128601400 56 + 0.147 0.100 -0.649
ENSG00000197694 E055 232.5768075 0.0002334977 3.735402e-09 1.925796e-07 9 128603543 128603590 48 + 2.416 2.319 -0.321
ENSG00000197694 E056 250.7821064 0.0002224416 6.663244e-08 2.580552e-06 9 128604326 128604417 92 + 2.438 2.359 -0.266
ENSG00000197694 E057 315.3016485 0.0001816628 2.764966e-07 9.185346e-06 9 128605034 128605178 145 + 2.528 2.467 -0.203
ENSG00000197694 E058 162.8322870 0.0003316150 3.656177e-05 6.386517e-04 9 128605296 128605326 31 + 2.249 2.176 -0.246
ENSG00000197694 E059 375.9428230 0.0014852350 2.283359e-04 2.983511e-03 9 128605327 128605477 151 + 2.597 2.545 -0.174
ENSG00000197694 E060 385.2402364 0.0022312836 8.758788e-04 8.897010e-03 9 128607604 128607703 100 + 2.608 2.556 -0.174
ENSG00000197694 E061 517.2997924 0.0002490176 1.543300e-05 3.056948e-04 9 128607852 128608035 184 + 2.723 2.694 -0.095
ENSG00000197694 E062 198.7364963 0.0002363438 2.971962e-02 1.265058e-01 9 128608036 128608049 14 + 2.297 2.286 -0.037
ENSG00000197694 E063 4.1254295 0.0722797640 3.276529e-02 1.353943e-01 9 128608050 128608129 80 + 0.876 0.522 -1.487
ENSG00000197694 E064 476.4220467 0.0001792716 3.114211e-04 3.845449e-03 9 128608130 128608276 147 + 2.677 2.660 -0.058
ENSG00000197694 E065 349.1889902 0.0008330047 9.209524e-02 2.676001e-01 9 128608874 128608938 65 + 2.528 2.533 0.018
ENSG00000197694 E066 330.0723748 0.0001615342 3.189961e-03 2.454816e-02 9 128608939 128608977 39 + 2.517 2.503 -0.048
ENSG00000197694 E067 525.3849626 0.0011359550 8.624146e-02 2.568895e-01 9 128609122 128609238 117 + 2.707 2.712 0.015
ENSG00000197694 E068 356.1361631 0.0022173219 2.478600e-01 4.856735e-01 9 128609239 128609284 46 + 2.537 2.546 0.028
ENSG00000197694 E069 1.3155713 0.6153725262 7.445709e-01   9 128609285 128609561 277 + 0.258 0.409 0.948
ENSG00000197694 E070 0.3926045 0.4213593072 4.006446e-01   9 128609592 128609650 59 + 0.000 0.237 11.395
ENSG00000197694 E071 6.6188957 0.1805847944 1.237863e-01 3.217090e-01 9 128609651 128609665 15 + 0.589 0.991 1.608
ENSG00000197694 E072 2.2147727 0.0099649420 2.336070e-01 4.693171e-01 9 128611602 128611712 111 + 0.345 0.583 1.225
ENSG00000197694 E073 2.0423983 0.0101666843 3.105725e-01 5.510585e-01 9 128611713 128611713 1 + 0.345 0.553 1.087
ENSG00000197694 E074 518.7875411 0.0011170367 4.994754e-01 7.004328e-01 9 128611714 128611845 132 + 2.688 2.717 0.098
ENSG00000197694 E075 0.9417030 0.0160498485 1.400318e-01   9 128611894 128612108 215 + 0.417 0.181 -1.647
ENSG00000197694 E076 538.8426450 0.0008144088 5.761259e-01 7.544950e-01 9 128612109 128612246 138 + 2.702 2.736 0.113
ENSG00000197694 E077 445.9667362 0.0001353702 8.003816e-02 2.449243e-01 9 128613381 128613485 105 + 2.631 2.646 0.050
ENSG00000197694 E078 668.8516613 0.0001218545 8.579594e-01 9.292926e-01 9 128615632 128615840 209 + 2.789 2.833 0.145
ENSG00000197694 E079 510.9966023 0.0001670207 1.984187e-01 4.276258e-01 9 128617640 128617760 121 + 2.657 2.725 0.228
ENSG00000197694 E080 508.8296053 0.0001602990 3.153073e-02 1.318553e-01 9 128617987 128618108 122 + 2.645 2.728 0.277
ENSG00000197694 E081 457.2949947 0.0005593965 2.760056e-01 5.160773e-01 9 128618871 128618952 82 + 2.608 2.677 0.228
ENSG00000197694 E082 362.6305317 0.0001511863 4.623597e-01 6.747740e-01 9 128618953 128619003 51 + 2.511 2.572 0.203
ENSG00000197694 E083 559.5672689 0.0007131218 4.552959e-06 1.061646e-04 9 128621158 128621256 99 + 2.645 2.785 0.464
ENSG00000197694 E084 5.1996074 0.0275292457 4.089461e-01 6.351838e-01 9 128621667 128622102 436 + 0.666 0.827 0.653
ENSG00000197694 E085 743.6554668 0.0026512571 4.789041e-06 1.108477e-04 9 128624328 128624487 160 + 2.741 2.920 0.593
ENSG00000197694 E086 11.9508751 0.1384192211 9.109571e-01 9.576370e-01 9 128624488 128624824 337 + 1.059 1.128 0.248
ENSG00000197694 E087 2.7166263 0.8050355735 5.150174e-01 7.116560e-01 9 128624825 128624865 41 + 0.334 0.665 1.649
ENSG00000197694 E088 8.7072503 0.2815229618 6.497457e-01 8.033327e-01 9 128624866 128625102 237 + 0.939 0.997 0.218
ENSG00000197694 E089 596.9629394 0.0013752880 6.121104e-12 5.491306e-10 9 128625103 128625179 77 + 2.623 2.834 0.704
ENSG00000197694 E090 725.6903192 0.0035207957 4.801636e-11 3.632197e-09 9 128625769 128625911 143 + 2.670 2.932 0.874
ENSG00000197694 E091 454.7714992 0.0036572156 2.032883e-11 1.662534e-09 9 128625912 128625961 50 + 2.450 2.735 0.949
ENSG00000197694 E092 260.9375979 0.0051903580 2.419767e-06 6.163895e-05 9 128625962 128625978 17 + 2.234 2.486 0.841
ENSG00000197694 E093 0.9760568 0.0204280818 2.982313e-01   9 128626307 128626390 84 + 0.147 0.359 1.671
ENSG00000197694 E094 542.3701435 0.0078399869 1.194844e-07 4.354335e-06 9 128626391 128626510 120 + 2.515 2.815 1.000
ENSG00000197694 E095 685.7699382 0.0050021116 5.373341e-10 3.291908e-08 9 128626511 128626687 177 + 2.629 2.913 0.947
ENSG00000197694 E096 2.5759697 0.1183712255 8.260227e-01 9.115035e-01 9 128627000 128627175 176 + 0.480 0.562 0.389
ENSG00000197694 E097 567.0480213 0.0266266715 1.510689e-03 1.368799e-02 9 128627386 128627494 109 + 2.535 2.835 0.996
ENSG00000197694 E098 267.6867886 0.1792854644 9.605023e-02 2.748040e-01 9 128627495 128627498 4 + 2.190 2.516 1.086
ENSG00000197694 E099 19.8247571 0.0248451919 5.585029e-02 1.932963e-01 9 128627499 128627924 426 + 1.131 1.387 0.900
ENSG00000197694 E100 295.7729687 0.2444546448 1.110810e-01 3.007467e-01 9 128627925 128627942 18 + 2.218 2.563 1.152
ENSG00000197694 E101 97.7826354 0.1419853049 8.350061e-01 9.165330e-01 9 128627943 128629043 1101 + 1.924 2.015 0.306
ENSG00000197694 E102 17.1418009 0.2652907547 6.481694e-01 8.023097e-01 9 128629125 128629186 62 + 1.061 1.332 0.963
ENSG00000197694 E103 9.3834222 0.2426177095 6.692895e-01 8.157782e-01 9 128629187 128629187 1 + 0.849 1.080 0.860
ENSG00000197694 E104 37.1800684 0.1854678758 9.878586e-01 9.957804e-01 9 128629188 128629494 307 + 1.473 1.621 0.506
ENSG00000197694 E105 70.4169442 0.1173239289 9.190574e-01 9.617527e-01 9 128629660 128630320 661 + 1.768 1.882 0.383
ENSG00000197694 E106 463.7847330 0.7986918712 2.274532e-01 4.623190e-01 9 128630321 128630375 55 + 2.361 2.771 1.366
ENSG00000197694 E107 3.4558848 0.2980596277 3.409638e-01 5.789017e-01 9 128630419 128630574 156 + 0.412 0.740 1.506
ENSG00000197694 E108 4.9126179 0.3140772523 2.681905e-01 5.078428e-01 9 128631608 128631796 189 + 0.524 0.870 1.451
ENSG00000197694 E109 5.6744294 0.2089388663 7.456453e-01 8.640759e-01 9 128631797 128632019 223 + 0.699 0.875 0.703
ENSG00000197694 E110 3.2705266 0.3376528231 8.916281e-01 9.474620e-01 9 128632020 128632126 107 + 0.528 0.672 0.639
ENSG00000197694 E111 836.6007309 0.0398624171 1.780733e-03 1.556805e-02 9 128632127 128632323 197 + 2.673 3.012 1.128
ENSG00000197694 E112 499.7745471 0.0023027684 2.323100e-16 4.214912e-14 9 128632431 128632484 54 + 2.488 2.778 0.967
ENSG00000197694 E113 563.4693482 0.0013268024 2.157991e-20 6.699754e-18 9 128632572 128632624 53 + 2.553 2.825 0.907
ENSG00000197694 E114 592.5173478 0.0021756477 1.178640e-12 1.188600e-10 9 128632625 128632685 61 + 2.594 2.840 0.818
ENSG00000197694 E115 540.2220026 0.0013970649 1.272041e-15 2.101379e-13 9 128632686 128632718 33 + 2.555 2.800 0.818
ENSG00000197694 E116 7.1680393 0.1793981961 7.663059e-01 8.763740e-01 9 128632719 128632807 89 + 0.800 0.945 0.558
ENSG00000197694 E117 835.1609161 0.0041386530 3.071251e-11 2.423648e-09 9 128632808 128632955 148 + 2.721 2.997 0.917
ENSG00000197694 E118 5.2100812 0.1845476823 6.271197e-01 7.886106e-01 9 128632956 128633190 235 + 0.673 0.838 0.666
ENSG00000197694 E119 423.0028126 0.0068871289 3.021239e-07 9.914508e-06 9 128633209 128633227 19 + 2.419 2.704 0.949
ENSG00000197694 E120 886.0064313 0.0050360769 1.423526e-11 1.193815e-09 9 128633228 128633662 435 + 2.727 3.029 1.004