ENSG00000196367

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000355540 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding protein_coding 18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 4.4499834 5.386212 4.252978 0.6554960 0.9713486 -0.3400855 0.241300000 0.19586667 0.24276667 0.04690000 8.455619e-01 1.673063e-09 FALSE TRUE
ENST00000359863 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding protein_coding 18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 1.8207063 3.310169 1.795734 0.5620708 0.2810083 -0.8786711 0.093941667 0.11720000 0.10486667 -0.01233333 9.198773e-01 1.673063e-09 FALSE TRUE
ENST00000360902 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding nonsense_mediated_decay 18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 2.4642330 2.861563 0.000000 0.8505012 0.0000000 -8.1656926 0.123170833 0.09780000 0.00000000 -0.09780000 1.673063e-09 1.673063e-09 TRUE TRUE
ENST00000446306 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding protein_coding 18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 1.5549122 4.256260 1.522141 0.4105884 0.8733228 -1.4774226 0.077020833 0.15506667 0.09163333 -0.06343333 7.968327e-01 1.673063e-09 FALSE TRUE
ENST00000456197 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding protein_coding 18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 1.4433586 0.000000 1.989839 0.0000000 1.0328382 7.6437398 0.084695833 0.00000000 0.11283333 0.11283333 2.454694e-01 1.673063e-09 FALSE TRUE
MSTRG.30289.13 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding   18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 0.1347558 0.000000 1.078047 0.0000000 0.3876126 6.7655967 0.007641667 0.00000000 0.06113333 0.06113333 1.062244e-07 1.673063e-09 FALSE TRUE
MSTRG.30289.21 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding   18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 3.8861483 9.883962 1.829991 1.2113100 0.2095017 -2.4268495 0.189445833 0.35373333 0.10663333 -0.24710000 3.804993e-08 1.673063e-09 FALSE TRUE
MSTRG.30289.23 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding   18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 0.4225195 0.000000 1.410251 0.0000000 0.7078262 7.1500021 0.025495833 0.00000000 0.08513333 0.08513333 2.417413e-01 1.673063e-09 TRUE TRUE
MSTRG.30289.24 ENSG00000196367 HEK293_OSMI2_6hA HEK293_TMG_6hB TRRAP protein_coding   18.95895 27.91442 17.26066 3.074539 0.7108666 -0.6932041 1.1459548 1.071601 2.310732 0.2282285 0.3338142 1.1014114 0.063587500 0.03746667 0.13283333 0.09536667 5.117956e-05 1.673063e-09 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000196367 E001 0.0000000       7 98877933 98877996 64 +      
ENSG00000196367 E002 0.0000000       7 98878083 98878292 210 +      
ENSG00000196367 E003 0.0000000       7 98878449 98878489 41 +      
ENSG00000196367 E004 0.3336024 0.0244411696 4.137237e-01   7 98878490 98878503 14 + 0.000 0.176 9.985
ENSG00000196367 E005 1.0008072 0.0747949896 5.396293e-02   7 98878504 98878520 17 + 0.000 0.399 14.000
ENSG00000196367 E006 1.0008072 0.0747949896 5.396293e-02   7 98878521 98878522 2 + 0.000 0.399 14.000
ENSG00000196367 E007 1.4876430 0.2667875944 5.384742e-01 7.279589e-01 7 98878523 98878531 9 + 0.266 0.438 1.040
ENSG00000196367 E008 2.0103755 0.0580974916 4.756037e-01 6.839183e-01 7 98878532 98878540 9 + 0.353 0.512 0.844
ENSG00000196367 E009 4.3239209 0.1746996775 9.549373e-02 2.738901e-01 7 98878541 98878545 5 + 0.431 0.815 1.702
ENSG00000196367 E010 6.0675709 0.1755816644 1.385021e-01 3.452433e-01 7 98878546 98878556 11 + 0.600 0.923 1.307
ENSG00000196367 E011 7.9441998 0.0042252445 3.598888e-01 5.956815e-01 7 98878557 98878562 6 + 0.834 0.978 0.548
ENSG00000196367 E012 9.9500315 0.0031632138 6.544603e-01 8.063707e-01 7 98878563 98878570 8 + 0.969 1.052 0.304
ENSG00000196367 E013 20.8665343 0.0016404141 8.259599e-01 9.114693e-01 7 98878571 98878611 41 + 1.295 1.348 0.185
ENSG00000196367 E014 24.7264008 0.0020977081 6.437008e-01 7.993449e-01 7 98878612 98878637 26 + 1.400 1.402 0.008
ENSG00000196367 E015 1.4804562 0.0832558527 8.700685e-02 2.582724e-01 7 98879010 98879080 71 + 0.546 0.242 -1.752
ENSG00000196367 E016 80.6178531 0.0018257133 1.666841e-12 1.648619e-10 7 98881090 98881250 161 + 2.051 1.778 -0.917
ENSG00000196367 E017 62.3694333 0.0007350564 2.115924e-18 5.118698e-16 7 98881975 98882024 50 + 1.981 1.621 -1.217
ENSG00000196367 E018 79.3550689 0.0004654252 1.321618e-19 3.673341e-17 7 98890335 98890445 111 + 2.068 1.743 -1.095
ENSG00000196367 E019 76.1895990 0.0120039376 1.515567e-08 6.823388e-07 7 98892424 98892528 105 + 2.057 1.714 -1.153
ENSG00000196367 E020 66.9475210 0.0037406672 8.273204e-13 8.598411e-11 7 98893798 98893881 84 + 1.997 1.663 -1.128
ENSG00000196367 E021 54.9742527 0.0008259883 1.456067e-16 2.729291e-14 7 98895764 98895820 57 + 1.927 1.565 -1.225
ENSG00000196367 E022 106.6256084 0.0109177796 1.346223e-10 9.304829e-09 7 98897741 98897866 126 + 2.208 1.851 -1.200
ENSG00000196367 E023 94.2513057 0.0008862442 8.050164e-28 5.545945e-25 7 98899422 98899499 78 + 2.167 1.785 -1.284
ENSG00000196367 E024 89.9823673 0.0078029579 2.288295e-13 2.665331e-11 7 98899679 98899767 89 + 2.145 1.764 -1.279
ENSG00000196367 E025 85.3677741 0.0018550423 6.114257e-22 2.262182e-19 7 98900624 98900720 97 + 2.122 1.746 -1.265
ENSG00000196367 E026 94.3712705 0.0005044231 3.679426e-19 9.539712e-17 7 98903379 98903517 139 + 2.129 1.834 -0.989
ENSG00000196367 E027 72.7426620 0.0023143748 1.080997e-12 1.098613e-10 7 98906177 98906255 79 + 2.015 1.718 -1.000
ENSG00000196367 E028 100.5863669 0.0003674248 2.346264e-20 7.257735e-18 7 98908728 98908962 235 + 2.153 1.861 -0.982
ENSG00000196367 E029 104.4359186 0.0056282140 9.362182e-12 8.087049e-10 7 98910056 98910419 364 + 2.174 1.867 -1.032
ENSG00000196367 E030 42.1632104 0.0052168077 1.184715e-10 8.276093e-09 7 98910510 98910512 3 + 1.814 1.440 -1.274
ENSG00000196367 E031 93.7296419 0.0113772245 1.093991e-08 5.087206e-07 7 98910513 98910607 95 + 2.139 1.808 -1.113
ENSG00000196367 E032 147.9571680 0.0040928471 1.026881e-13 1.274766e-11 7 98911077 98911271 195 + 2.312 2.030 -0.943
ENSG00000196367 E033 135.7698837 0.0003950675 5.823372e-18 1.334605e-15 7 98912022 98912213 192 + 2.253 2.019 -0.781
ENSG00000196367 E034 96.9362546 0.0005027827 1.747268e-09 9.751110e-08 7 98915723 98915831 109 + 2.084 1.898 -0.623
ENSG00000196367 E035 63.7020679 0.0006414370 7.089919e-04 7.518147e-03 7 98915832 98915888 57 + 1.866 1.749 -0.394
ENSG00000196367 E036 146.0772481 0.0075731194 4.465618e-07 1.401524e-05 7 98917423 98917679 257 + 2.281 2.056 -0.753
ENSG00000196367 E037 72.5656723 0.0141764746 1.025797e-04 1.527970e-03 7 98921753 98921816 64 + 1.988 1.743 -0.825
ENSG00000196367 E038 111.9508038 0.0150453218 1.789184e-04 2.436605e-03 7 98921817 98921953 137 + 2.165 1.939 -0.759
ENSG00000196367 E039 130.5949408 0.0114870932 1.538614e-05 3.049271e-04 7 98925112 98925263 152 + 2.234 2.005 -0.768
ENSG00000196367 E040 136.2278280 0.0006453763 4.260048e-13 4.691661e-11 7 98927167 98927366 200 + 2.236 2.039 -0.661
ENSG00000196367 E041 131.0230950 0.0003024554 3.808242e-10 2.389975e-08 7 98929989 98930206 218 + 2.201 2.041 -0.538
ENSG00000196367 E042 126.7659449 0.0023462843 3.439249e-03 2.598379e-02 7 98930633 98930830 198 + 2.143 2.067 -0.254
ENSG00000196367 E043 60.7646884 0.0031183663 3.717000e-03 2.756592e-02 7 98931405 98931420 16 + 1.848 1.735 -0.383
ENSG00000196367 E044 171.4480921 0.0035958672 5.545404e-05 9.105947e-04 7 98931421 98931665 245 + 2.298 2.176 -0.408
ENSG00000196367 E045 136.7380339 0.0009271446 8.721474e-07 2.521462e-05 7 98933241 98933387 147 + 2.204 2.077 -0.425
ENSG00000196367 E046 49.7964015 0.0008592660 1.278179e-02 6.955421e-02 7 98933388 98933402 15 + 1.751 1.660 -0.305
ENSG00000196367 E047 110.1426906 0.0025032740 1.343222e-06 3.672677e-05 7 98935579 98935675 97 + 2.130 1.969 -0.539
ENSG00000196367 E048 135.8277879 0.0010646620 2.866867e-08 1.212301e-06 7 98937156 98937277 122 + 2.213 2.062 -0.505
ENSG00000196367 E049 163.9141870 0.0042618025 1.285902e-04 1.843611e-03 7 98937650 98937820 171 + 2.279 2.155 -0.414
ENSG00000196367 E050 104.4332814 0.0025772897 1.225889e-01 3.198896e-01 7 98942949 98943017 69 + 2.031 2.002 -0.098
ENSG00000196367 E051 1.8312942 0.0222321305 4.658732e-01 6.772002e-01 7 98945747 98945800 54 + 0.352 0.510 0.843
ENSG00000196367 E052 0.3447487 0.4801376923 5.390524e-01   7 98945930 98945950 21 + 0.000 0.179 11.531
ENSG00000196367 E053 113.3076651 0.0004899474 8.056321e-04 8.327984e-03 7 98948221 98948340 120 + 2.097 2.018 -0.263
ENSG00000196367 E054 102.0353424 0.0018094080 1.424964e-03 1.307568e-02 7 98948566 98948685 120 + 2.059 1.968 -0.304
ENSG00000196367 E055 107.4935605 0.0004140916 2.561803e-03 2.072965e-02 7 98949417 98949581 165 + 2.067 1.998 -0.231
ENSG00000196367 E056 144.2923669 0.0027356157 9.190941e-04 9.254318e-03 7 98949660 98949841 182 + 2.205 2.111 -0.313
ENSG00000196367 E057 146.5387299 0.0003268856 2.641585e-03 2.122153e-02 7 98950064 98950221 158 + 2.190 2.135 -0.182
ENSG00000196367 E058 90.3628358 0.0004836543 6.302309e-03 4.121178e-02 7 98950222 98950262 41 + 1.991 1.923 -0.227
ENSG00000196367 E059 118.0442698 0.0005310489 4.646155e-03 3.271922e-02 7 98950876 98951004 129 + 2.101 2.041 -0.200
ENSG00000196367 E060 189.7576737 0.0021005534 3.702125e-01 6.041193e-01 7 98953167 98953433 267 + 2.264 2.270 0.021
ENSG00000196367 E061 167.0269913 0.0003094482 2.039713e-01 4.346011e-01 7 98955098 98955304 207 + 2.212 2.212 0.001
ENSG00000196367 E062 172.7636442 0.0003283860 2.464767e-01 4.841246e-01 7 98956146 98956304 159 + 2.223 2.227 0.012
ENSG00000196367 E063 190.0804331 0.0002345260 2.672993e-01 5.069188e-01 7 98956399 98956533 135 + 2.263 2.270 0.024
ENSG00000196367 E064 166.6485105 0.0003128899 9.959306e-01 9.995858e-01 7 98957981 98958091 111 + 2.189 2.226 0.125
ENSG00000196367 E065 203.2215033 0.0002522210 6.686565e-01 8.153213e-01 7 98959344 98959490 147 + 2.279 2.305 0.086
ENSG00000196367 E066 250.5404025 0.0002377819 5.111599e-01 7.088545e-01 7 98961261 98961474 214 + 2.374 2.395 0.072
ENSG00000196367 E067 201.7644827 0.0002749281 1.025915e-01 2.863971e-01 7 98962302 98962427 126 + 2.297 2.291 -0.019
ENSG00000196367 E068 229.5494225 0.0025309157 3.945546e-01 6.239938e-01 7 98964629 98964775 147 + 2.345 2.352 0.026
ENSG00000196367 E069 1.4578306 0.0124067266 9.757133e-02 2.775303e-01 7 98965693 98965695 3 + 0.151 0.478 2.269
ENSG00000196367 E070 267.0141888 0.0002259940 7.751544e-01 8.818186e-01 7 98965696 98965895 200 + 2.386 2.431 0.148
ENSG00000196367 E071 225.1205839 0.0012511672 7.802990e-01 8.849606e-01 7 98967041 98967162 122 + 2.323 2.352 0.095
ENSG00000196367 E072 306.7097002 0.0001726014 6.969115e-01 8.335501e-01 7 98967485 98967698 214 + 2.446 2.492 0.152
ENSG00000196367 E073 173.5359216 0.0002372533 2.564926e-01 4.952625e-01 7 98970112 98970186 75 + 2.184 2.254 0.233
ENSG00000196367 E074 224.5504103 0.0002557491 7.081000e-01 8.405739e-01 7 98970187 98970291 105 + 2.321 2.348 0.092
ENSG00000196367 E075 246.3675297 0.0002835580 8.695259e-01 9.356161e-01 7 98971799 98971945 147 + 2.357 2.390 0.110
ENSG00000196367 E076 1.3451463 0.0258314036 1.394545e-01   7 98975960 98976148 189 + 0.488 0.244 -1.460
ENSG00000196367 E077 197.9932902 0.0010771709 9.998313e-01 1.000000e+00 7 98976149 98976268 120 + 2.260 2.296 0.120
ENSG00000196367 E078 316.4947643 0.0002710641 1.944049e-01 4.226185e-01 7 98976483 98976770 288 + 2.445 2.511 0.218
ENSG00000196367 E079 231.4877321 0.0006278974 7.294800e-02 2.307237e-01 7 98976939 98977076 138 + 2.297 2.382 0.285
ENSG00000196367 E080 202.6803369 0.0025689137 5.818245e-02 1.986793e-01 7 98978211 98978323 113 + 2.225 2.329 0.349
ENSG00000196367 E081 195.0969159 0.0003262814 5.510595e-04 6.140589e-03 7 98978769 98978904 136 + 2.189 2.323 0.447
ENSG00000196367 E082 265.6054942 0.0012492806 1.478382e-03 1.346317e-02 7 98981769 98981960 192 + 2.328 2.456 0.430
ENSG00000196367 E083 336.8522672 0.0009774354 8.561349e-03 5.188035e-02 7 98983264 98983459 196 + 2.449 2.552 0.343
ENSG00000196367 E084 42.8123051 0.0059395945 4.717301e-01 6.813323e-01 7 98983460 98983492 33 + 1.574 1.655 0.276
ENSG00000196367 E085 356.1756309 0.0002015006 1.460700e-02 7.661883e-02 7 98984093 98984358 266 + 2.482 2.569 0.290
ENSG00000196367 E086 211.0514334 0.0002263059 7.321098e-06 1.600529e-04 7 98984944 98985044 101 + 2.207 2.364 0.524
ENSG00000196367 E087 289.2654999 0.0094344497 4.348457e-03 3.108554e-02 7 98988765 98988966 202 + 2.327 2.507 0.601
ENSG00000196367 E088 265.7730756 1.3302823264 3.585106e-01 5.945929e-01 7 98990455 98990619 165 + 2.161 2.511 1.168
ENSG00000196367 E089 220.7205506 1.2501518907 3.270170e-01 5.661355e-01 7 98992137 98992227 91 + 2.061 2.435 1.249
ENSG00000196367 E090 147.0514004 1.0926059198 2.979981e-01 5.384495e-01 7 98993538 98993591 54 + 1.881 2.261 1.271
ENSG00000196367 E091 251.1480502 1.2730980572 3.119669e-01 5.523093e-01 7 98993592 98993737 146 + 2.093 2.497 1.348
ENSG00000196367 E092 344.6284731 0.0086021483 1.628496e-05 3.206075e-04 7 98994587 98994848 262 + 2.351 2.600 0.831
ENSG00000196367 E093 361.1953058 0.0047601432 2.159916e-04 2.852282e-03 7 99004190 99004415 226 + 2.420 2.603 0.609
ENSG00000196367 E094 356.1127553 0.0002613502 1.439411e-15 2.359509e-13 7 99005131 99005348 218 + 2.397 2.606 0.698
ENSG00000196367 E095 286.0247388 0.0002667262 2.654292e-14 3.673675e-12 7 99008377 99008561 185 + 2.296 2.515 0.731
ENSG00000196367 E096 367.3087069 0.0002401940 8.839476e-22 3.193929e-19 7 99011052 99011255 204 + 2.387 2.629 0.806
ENSG00000196367 E097 472.9064882 0.0016024742 4.545874e-15 6.980054e-13 7 99011341 99011535 195 + 2.493 2.737 0.813
ENSG00000196367 E098 1342.6459221 0.0028810902 6.564551e-22 2.407801e-19 7 99012071 99014617 2547 + 2.905 3.201 0.985
ENSG00000196367 E099 13.4916879 0.0437323789 5.468120e-01 7.340288e-01 7 99014618 99014955 338 + 1.072 1.199 0.457
ENSG00000196367 E100 0.5227326 0.3312507101 1.000000e+00   7 99020254 99020329 76 + 0.152 0.178 0.273
ENSG00000196367 E101 9.1421471 0.0087210880 7.979266e-02 2.444065e-01 7 99030595 99030757 163 + 0.833 1.079 0.918
ENSG00000196367 E102 1.3729807 0.0309184692 8.989942e-01   7 99030758 99030764 7 + 0.351 0.397 0.264
ENSG00000196367 E103 3.7491690 0.0078335612 5.200016e-01 7.149899e-01 7 99030885 99030890 6 + 0.592 0.720 0.546
ENSG00000196367 E104 8.8822798 0.0057432784 4.431202e-01 6.608066e-01 7 99030891 99031000 110 + 0.907 1.031 0.461
ENSG00000196367 E105 8.8136066 0.0037289576 2.855209e-01 5.261058e-01 7 99031345 99031465 121 + 0.884 1.041 0.587
ENSG00000196367 E106 7.4456676 0.0037763080 1.784482e-01 4.018486e-01 7 99032894 99033039 146 + 0.777 0.978 0.770
ENSG00000196367 E107 1.6937166 0.4785581429 5.863632e-01 7.612004e-01 7 99035417 99036477 1061 + 0.501 0.354 -0.782
ENSG00000196367 E108 1.8609140 0.0318253616 9.636651e-01 9.837268e-01 7 99039943 99040122 180 + 0.426 0.440 0.076
ENSG00000196367 E109 3.6672363 0.0508434232 1.339716e-01 3.380552e-01 7 99045542 99045792 251 + 0.426 0.727 1.379
ENSG00000196367 E110 0.1723744 0.0333227084 8.309832e-01   7 99045793 99045800 8 + 0.000 0.097 11.673
ENSG00000196367 E111 13.2806133 0.0167095013 1.376167e-02 7.339303e-02 7 99047655 99048023 369 + 0.906 1.228 1.175
ENSG00000196367 E112 18.0539977 0.0042345657 8.773716e-01 9.399200e-01 7 99048024 99050831 2808 + 1.236 1.285 0.171
ENSG00000196367 E113 0.1614157 0.0322410162 2.750662e-01   7 99053595 99053619 25 + 0.151 0.000 -13.413