ENSG00000185842

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000366850 ENSG00000185842 HEK293_OSMI2_6hA HEK293_TMG_6hB DNAH14 protein_coding protein_coding 18.8413 10.13919 26.79664 0.3259745 1.675473 1.401225 5.9515644 3.9504269 7.53783901 0.1391603 0.34725332 0.9304077 0.30247500 0.39043333 0.284833333 -0.10560000 0.354668113 0.006988407 FALSE  
ENST00000453375 ENSG00000185842 HEK293_OSMI2_6hA HEK293_TMG_6hB DNAH14 protein_coding processed_transcript 18.8413 10.13919 26.79664 0.3259745 1.675473 1.401225 2.8008127 0.8315417 3.75075936 0.5513194 0.46986395 2.1599174 0.14596250 0.08140000 0.138866667 0.05746667 0.758094821 0.006988407 FALSE  
ENST00000474127 ENSG00000185842 HEK293_OSMI2_6hA HEK293_TMG_6hB DNAH14 protein_coding retained_intron 18.8413 10.13919 26.79664 0.3259745 1.675473 1.401225 1.6619572 1.8010667 2.17530256 0.1082032 0.19091953 0.2709934 0.09675833 0.17770000 0.081900000 -0.09580000 0.006988407 0.006988407    
ENST00000486657 ENSG00000185842 HEK293_OSMI2_6hA HEK293_TMG_6hB DNAH14 protein_coding retained_intron 18.8413 10.13919 26.79664 0.3259745 1.675473 1.401225 3.8046288 1.1383694 7.34497723 0.5699943 1.18307270 2.6791341 0.17876667 0.11466667 0.272133333 0.15746667 0.704570012 0.006988407 FALSE  
MSTRG.3140.2 ENSG00000185842 HEK293_OSMI2_6hA HEK293_TMG_6hB DNAH14 protein_coding   18.8413 10.13919 26.79664 0.3259745 1.675473 1.401225 0.1794941 0.6306323 0.06249185 0.3454887 0.06249185 -3.1436060 0.01541667 0.06263333 0.002633333 -0.06000000 0.482865846 0.006988407 FALSE  
MSTRG.3140.7 ENSG00000185842 HEK293_OSMI2_6hA HEK293_TMG_6hB DNAH14 protein_coding   18.8413 10.13919 26.79664 0.3259745 1.675473 1.401225 1.3140134 0.4138797 1.20531660 0.2868346 0.47415013 1.5196053 0.07480000 0.03960000 0.044400000 0.00480000 0.912872625 0.006988407 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000185842 E001 0.0000000       1 224896262 224896365 104 +      
ENSG00000185842 E002 0.0000000       1 224923277 224923375 99 +      
ENSG00000185842 E003 0.1779838 0.0359521876 0.895301687   1 224929342 224929515 174 + 0.094 0.000 -9.112
ENSG00000185842 E004 0.1779838 0.0359521876 0.895301687   1 224929516 224929525 10 + 0.094 0.000 -12.148
ENSG00000185842 E005 0.1779838 0.0359521876 0.895301687   1 224929526 224929629 104 + 0.094 0.000 -12.148
ENSG00000185842 E006 0.9169527 0.0157308360 0.315722608   1 224929630 224929653 24 + 0.343 0.156 -1.473
ENSG00000185842 E007 0.9169527 0.0157308360 0.315722608   1 224929654 224929660 7 + 0.343 0.156 -1.473
ENSG00000185842 E008 1.2505550 0.0137469608 0.904475049   1 224929661 224929666 6 + 0.343 0.361 0.113
ENSG00000185842 E009 2.2138156 0.0091839079 0.984773358 0.99421085 1 224929667 224929674 8 + 0.500 0.500 0.001
ENSG00000185842 E010 2.6902402 0.0078652066 0.990120725 0.99679148 1 224929675 224929677 3 + 0.561 0.556 -0.025
ENSG00000185842 E011 3.1557062 0.0075545925 0.614289338 0.77974451 1 224929678 224929681 4 + 0.640 0.556 -0.373
ENSG00000185842 E012 16.4207529 0.0085274375 0.096383790 0.27541884 1 224929682 224929714 33 + 1.173 1.320 0.518
ENSG00000185842 E013 43.4957703 0.0009875012 0.141266991 0.34939767 1 224929715 224929835 121 + 1.609 1.683 0.252
ENSG00000185842 E014 31.7072291 0.0012036065 0.511323893 0.70897507 1 224952670 224952694 25 + 1.488 1.525 0.125
ENSG00000185842 E015 29.0792489 0.0012294965 0.438717941 0.65778254 1 224952695 224952695 1 + 1.449 1.496 0.159
ENSG00000185842 E016 31.2527260 0.0011277232 0.449663205 0.66545050 1 224952696 224952702 7 + 1.482 1.525 0.148
ENSG00000185842 E017 68.8027681 0.0006494023 0.152929054 0.36650535 1 224952703 224952779 77 + 1.852 1.784 -0.231
ENSG00000185842 E018 0.4762370 0.0213212868 0.275764983   1 224952989 224953077 89 + 0.093 0.271 1.852
ENSG00000185842 E019 0.1614157 0.0346414727 0.895332526   1 224954469 224954576 108 + 0.094 0.000 -12.151
ENSG00000185842 E020 74.1164125 0.0096047618 0.003674652 0.02734125 1 224954959 224955038 80 + 1.920 1.729 -0.642
ENSG00000185842 E021 70.2928614 0.0049281352 0.008561176 0.05188035 1 224955039 224955098 60 + 1.887 1.739 -0.500
ENSG00000185842 E022 89.1089215 0.0149385320 0.251809727 0.48984915 1 224960153 224960302 150 + 1.968 1.888 -0.270
ENSG00000185842 E023 1.1442650 0.0421995592 0.030721782   1 224961097 224961329 233 + 0.429 0.000 -14.542
ENSG00000185842 E024 86.0140912 0.0217037072 0.575945321 0.75436546 1 224964479 224964609 131 + 1.942 1.895 -0.156
ENSG00000185842 E025 36.1552423 0.0418834444 0.812775532 0.90385685 1 224967431 224967439 9 + 1.566 1.544 -0.072
ENSG00000185842 E026 64.5003540 0.0139096098 0.586127714 0.76103589 1 224967440 224967514 75 + 1.818 1.773 -0.150
ENSG00000185842 E027 52.5197875 0.0113032700 0.519424825 0.71465258 1 224967515 224967545 31 + 1.730 1.677 -0.179
ENSG00000185842 E028 51.5771452 0.0134145419 0.217393723 0.45027724 1 224967546 224967583 38 + 1.738 1.642 -0.326
ENSG00000185842 E029 8.4392446 0.0359070259 0.635830424 0.79415321 1 224967584 224967625 42 + 0.941 1.015 0.274
ENSG00000185842 E030 33.8708382 0.0019274808 0.016953049 0.08528881 1 224967680 224967924 245 + 1.468 1.611 0.489
ENSG00000185842 E031 39.6827323 0.0009552007 0.616150435 0.78113815 1 224968759 224968874 116 + 1.588 1.611 0.079
ENSG00000185842 E032 35.2741839 0.0137574052 0.012444544 0.06822384 1 224968875 224969493 619 + 1.462 1.655 0.658
ENSG00000185842 E033 21.5218677 0.0071320797 0.577326043 0.75533411 1 224969634 224969829 196 + 1.331 1.376 0.159
ENSG00000185842 E034 5.5328564 0.0050107316 0.400903423 0.62902593 1 224974091 224974153 63 + 0.845 0.727 -0.471
ENSG00000185842 E035 4.5608955 0.0107375977 0.678943804 0.82205845 1 225002783 225002927 145 + 0.706 0.761 0.224
ENSG00000185842 E036 5.9785459 0.0048557759 0.880972651 0.94179268 1 225007413 225007544 132 + 0.845 0.821 -0.093
ENSG00000185842 E037 4.0451775 0.0062178600 0.643053773 0.79886263 1 225023615 225023865 251 + 0.663 0.727 0.265
ENSG00000185842 E038 0.1779838 0.0359521876 0.895301687   1 225023866 225024604 739 + 0.094 0.000 -12.148
ENSG00000185842 E039 5.5704185 0.0049531168 0.398761635 0.62725234 1 225038694 225038823 130 + 0.845 0.727 -0.472
ENSG00000185842 E040 5.6249086 0.0052310485 0.892038954 0.94761844 1 225042835 225043114 280 + 0.815 0.792 -0.088
ENSG00000185842 E041 1.6738947 0.0225079000 0.962189089 0.98311244 1 225043744 225043789 46 + 0.428 0.435 0.037
ENSG00000185842 E042 1.7202025 0.0119319322 0.509185978 0.70731409 1 225043886 225043983 98 + 0.388 0.500 0.584
ENSG00000185842 E043 1.8087070 0.0109161117 0.663073521 0.81181428 1 225050210 225050376 167 + 0.428 0.500 0.364
ENSG00000185842 E044 3.1352599 0.0345492092 0.998088782 1.00000000 1 225051451 225051684 234 + 0.613 0.606 -0.032
ENSG00000185842 E045 1.1062551 0.0953555075 0.262947600   1 225051685 225051795 111 + 0.234 0.438 1.287
ENSG00000185842 E046 4.6253194 0.0134626109 0.534112060 0.72498651 1 225079207 225079548 342 + 0.707 0.792 0.344
ENSG00000185842 E047 6.4187728 0.0233844741 0.036312093 0.14508008 1 225080379 225080748 370 + 0.726 1.007 1.084
ENSG00000185842 E048 5.7211268 0.0054835673 0.010938254 0.06210937 1 225082549 225082739 191 + 0.663 0.985 1.266
ENSG00000185842 E049 1.4121584 0.0154959863 0.397969249 0.62672882 1 225085544 225085676 133 + 0.428 0.271 -0.958
ENSG00000185842 E050 3.7074957 0.0277088064 0.593853749 0.76627347 1 225085677 225085789 113 + 0.615 0.693 0.330
ENSG00000185842 E051 5.5535274 0.0257747312 0.948541356 0.97651608 1 225097118 225097239 122 + 0.797 0.795 -0.008
ENSG00000185842 E052 1.1431969 0.3972891410 0.209220843   1 225100713 225100884 172 + 0.171 0.503 2.177
ENSG00000185842 E053 2.6326432 0.0110869460 0.501308717 0.70172312 1 225117684 225117788 105 + 0.500 0.606 0.489
ENSG00000185842 E054 3.3581802 0.0117218295 0.265065776 0.50439247 1 225117881 225117956 76 + 0.561 0.727 0.716
ENSG00000185842 E055 2.4063263 0.0220371652 0.881387842 0.94202943 1 225117957 225117970 14 + 0.531 0.501 -0.145
ENSG00000185842 E056 3.1180014 0.0667367444 0.632797685 0.79216544 1 225117971 225117999 29 + 0.561 0.653 0.405
ENSG00000185842 E057 0.5171231 0.6859343436 0.158047308   1 225118000 225118203 204 + 0.000 0.369 13.148
ENSG00000185842 E058 3.6186289 0.0073758286 0.599806786 0.77008730 1 225119220 225119294 75 + 0.615 0.690 0.321
ENSG00000185842 E059 6.5812566 0.0048925887 0.550585344 0.73675128 1 225123527 225123614 88 + 0.830 0.900 0.267
ENSG00000185842 E060 0.1723744 0.0328871948 0.267744680   1 225140731 225140767 37 + 0.000 0.156 12.531
ENSG00000185842 E061 0.4756169 0.0237058522 0.025382702   1 225140768 225141021 254 + 0.000 0.362 14.008
ENSG00000185842 E062 8.5287920 0.0085235960 0.648982344 0.80283916 1 225144397 225144628 232 + 0.984 0.923 -0.227
ENSG00000185842 E063 3.4279917 0.0070881676 0.080457508 0.24578240 1 225145326 225145379 54 + 0.726 0.436 -1.319
ENSG00000185842 E064 1.2850467 0.0214025496 0.547253531   1 225147104 225147249 146 + 0.387 0.271 -0.728
ENSG00000185842 E065 0.1723744 0.0328871948 0.267744680   1 225151883 225152004 122 + 0.000 0.156 12.531
ENSG00000185842 E066 2.7073559 0.0084426668 0.627211725 0.78868435 1 225152005 225152073 69 + 0.532 0.606 0.337
ENSG00000185842 E067 6.8481405 0.0043811221 0.301753275 0.54229158 1 225152697 225152883 187 + 0.927 0.792 -0.521
ENSG00000185842 E068 2.7227564 0.0181897913 0.650192494 0.80370372 1 225153750 225153826 77 + 0.532 0.605 0.331
ENSG00000185842 E069 1.9789859 0.1433593434 0.766234478 0.87635192 1 225159314 225159328 15 + 0.431 0.502 0.358
ENSG00000185842 E070 3.9159020 0.0262998754 0.575714529 0.75415624 1 225159329 225159485 157 + 0.641 0.727 0.362
ENSG00000185842 E071 0.4654660 0.0297396085 0.230242903   1 225162887 225162923 37 + 0.236 0.000 -13.579
ENSG00000185842 E072 4.8895086 0.0058764294 0.377080131 0.60990532 1 225167939 225168028 90 + 0.706 0.822 0.465
ENSG00000185842 E073 7.6055649 0.0063124190 0.983505436 0.99356258 1 225185291 225185425 135 + 0.926 0.923 -0.013
ENSG00000185842 E074 0.2852693 0.2717108329 0.515944865   1 225192696 225192911 216 + 0.168 0.000 -12.588
ENSG00000185842 E075 0.4702677 0.0215195646 1.000000000   1 225204183 225204273 91 + 0.171 0.156 -0.153
ENSG00000185842 E076 3.1473812 0.2346516173 0.883674817 0.94321405 1 225205971 225206179 209 + 0.595 0.610 0.065
ENSG00000185842 E077 1.6786466 0.0123558742 0.216828871 0.44965844 1 225206968 225207220 253 + 0.500 0.271 -1.318
ENSG00000185842 E078 3.3210661 0.0074179528 0.517092945 0.71306181 1 225231073 225231151 79 + 0.663 0.556 -0.470
ENSG00000185842 E079 5.8689320 0.0046042585 0.154258059 0.36835296 1 225240593 225240793 201 + 0.888 0.690 -0.788
ENSG00000185842 E080 1.7955354 0.0236850602 0.880842114 0.94168647 1 225240794 225240822 29 + 0.465 0.435 -0.153
ENSG00000185842 E081 0.0000000       1 225250656 225250662 7 +      
ENSG00000185842 E082 0.0000000       1 225250663 225250703 41 +      
ENSG00000185842 E083 0.0000000       1 225250704 225250707 4 +      
ENSG00000185842 E084 3.9268364 0.0986975204 0.581424933 0.75810454 1 225252301 225252417 117 + 0.738 0.602 -0.576
ENSG00000185842 E085 5.2246246 0.0053714893 0.179229623 0.40292974 1 225257960 225258118 159 + 0.845 0.650 -0.792
ENSG00000185842 E086 5.8061168 0.0100729725 0.098033473 0.27831653 1 225259121 225259253 133 + 0.889 0.650 -0.960
ENSG00000185842 E087 3.8412259 0.0078050961 0.283748295 0.52421034 1 225264197 225264261 65 + 0.726 0.556 -0.735
ENSG00000185842 E088 5.1342148 0.0053954111 0.537039785 0.72703704 1 225265182 225265369 188 + 0.815 0.726 -0.354
ENSG00000185842 E089 2.0690382 0.0970982375 0.997147367 1.00000000 1 225266641 225266769 129 + 0.497 0.494 -0.014
ENSG00000185842 E090 4.5825798 0.0057662431 0.922195850 0.96337483 1 225270735 225270866 132 + 0.745 0.727 -0.075
ENSG00000185842 E091 1.1665423 0.1259991596 0.293440584   1 225271906 225272073 168 + 0.234 0.441 1.301
ENSG00000185842 E092 5.2632276 0.0393484525 0.465609371 0.67703145 1 225272955 225273125 171 + 0.815 0.693 -0.493
ENSG00000185842 E093 3.2882355 0.0087047773 0.974265735 0.98902928 1 225275914 225276081 168 + 0.615 0.606 -0.042
ENSG00000185842 E094 1.6424194 0.0113367298 0.765883948 0.87615344 1 225277410 225277502 93 + 0.388 0.437 0.266
ENSG00000185842 E095 4.0300528 0.0070863190 0.008882836 0.05329670 1 225289885 225290082 198 + 0.799 0.362 -2.025
ENSG00000185842 E096 0.9654734 0.0857186889 0.914840155   1 225300869 225301030 162 + 0.293 0.270 -0.161
ENSG00000185842 E097 0.3503582 0.0305318357 0.659714677   1 225303156 225303347 192 + 0.094 0.156 0.850
ENSG00000185842 E098 3.2530740 0.0086565868 0.620716167 0.78432627 1 225304908 225305089 182 + 0.640 0.557 -0.370
ENSG00000185842 E099 2.1430470 0.0100249929 0.821610746 0.90891022 1 225307461 225307569 109 + 0.466 0.501 0.172
ENSG00000185842 E100 2.6867398 0.0715022624 0.213683905 0.44599024 1 225308285 225308410 126 + 0.618 0.364 -1.263
ENSG00000185842 E101 1.4622227 0.0147009905 0.579956280 0.75714880 1 225318583 225318677 95 + 0.343 0.437 0.530
ENSG00000185842 E102 3.0927034 0.0275022302 0.726804875 0.85231629 1 225322664 225322823 160 + 0.616 0.556 -0.271
ENSG00000185842 E103 3.6875624 0.0742490881 0.295292374 0.53578477 1 225324222 225324353 132 + 0.711 0.502 -0.927
ENSG00000185842 E104 3.1213278 0.2715168443 0.843398425 0.92132028 1 225324737 225324832 96 + 0.570 0.621 0.225
ENSG00000185842 E105 1.6755558 0.0778160510 0.764982981 0.87562231 1 225331437 225331577 141 + 0.389 0.438 0.264
ENSG00000185842 E106 2.3173900 0.2039991765 0.208428345 0.43995690 1 225333291 225333506 216 + 0.393 0.649 1.228
ENSG00000185842 E107 2.8444308 0.0084041948 0.031170152 0.13085007 1 225337266 225337496 231 + 0.428 0.760 1.501
ENSG00000185842 E108 2.0635462 0.0103738000 0.825994080 0.91147783 1 225338061 225338182 122 + 0.466 0.500 0.171
ENSG00000185842 E109 0.4929928 0.0208665203 1.000000000   1 225338259 225338287 29 + 0.170 0.156 -0.149
ENSG00000185842 E110 3.4864756 0.0066908419 0.603927985 0.77280193 1 225340457 225340701 245 + 0.615 0.690 0.319
ENSG00000185842 E111 6.4385678 0.0466057411 0.111302603 0.30115018 1 225345962 225346380 419 + 0.763 1.000 0.908
ENSG00000185842 E112 5.4727726 0.0446644508 0.643039718 0.79885686 1 225346456 225346654 199 + 0.763 0.827 0.253
ENSG00000185842 E113 6.9504685 0.0063444374 0.960734031 0.98226221 1 225351647 225351883 237 + 0.875 0.875 0.003
ENSG00000185842 E114 2.3611320 0.0163793630 0.275361970 0.51540610 1 225353803 225353888 86 + 0.562 0.362 -1.021
ENSG00000185842 E115 0.1614157 0.0346414727 0.895332526   1 225354174 225354273 100 + 0.094 0.000 -12.151
ENSG00000185842 E116 0.0000000       1 225357768 225357870 103 +      
ENSG00000185842 E117 2.3822981 0.0546163138 0.572646608 0.75215252 1 225358496 225358504 9 + 0.466 0.560 0.455
ENSG00000185842 E118 5.8817079 0.0296592505 0.640491114 0.79721994 1 225358505 225358652 148 + 0.797 0.853 0.220
ENSG00000185842 E119 6.3549243 0.0366807142 0.206260545 0.43731160 1 225360681 225360891 211 + 0.779 0.948 0.652
ENSG00000185842 E120 3.5284143 0.0069350017 0.598219715 0.76903807 1 225364792 225364894 103 + 0.615 0.690 0.320
ENSG00000185842 E121 2.0791909 0.0991834831 0.402821797 0.63060846 1 225367805 225367876 72 + 0.534 0.359 -0.914
ENSG00000185842 E122 2.1092905 0.0806106358 0.479017244 0.68645999 1 225367877 225368032 156 + 0.429 0.557 0.626
ENSG00000185842 E123 4.4306451 0.1732363405 0.795187534 0.89348374 1 225374688 225374877 190 + 0.698 0.766 0.276
ENSG00000185842 E124 2.0924284 0.4089079376 0.892392272 0.94780267 1 225374878 225374885 8 + 0.460 0.509 0.243
ENSG00000185842 E125 2.9489510 0.5150940522 0.813449279 0.90431305 1 225377237 225377255 19 + 0.529 0.663 0.600
ENSG00000185842 E126 6.2646743 0.1946378093 0.276380575 0.51637479 1 225377256 225377436 181 + 0.684 1.033 1.353
ENSG00000185842 E127 5.5510237 0.1834976259 0.160694419 0.37782055 1 225380159 225380322 164 + 0.618 1.007 1.540
ENSG00000185842 E128 5.9902193 0.0082729089 0.211763974 0.44382674 1 225381383 225381579 197 + 0.764 0.922 0.614
ENSG00000185842 E129 4.9951802 0.0136622210 0.614812632 0.78015102 1 225388379 225388491 113 + 0.727 0.793 0.267
ENSG00000185842 E130 2.7938712 0.0107631327 0.335781638 0.57423688 1 225389734 225389739 6 + 0.500 0.650 0.681
ENSG00000185842 E131 5.2696631 0.0068356076 0.337017337 0.57539408 1 225389740 225389873 134 + 0.726 0.850 0.491
ENSG00000185842 E132 7.7376411 0.0355949719 0.291070305 0.53164633 1 225392291 225392451 161 + 0.862 1.006 0.542
ENSG00000185842 E133 1.4975719 0.0196531098 0.583833988 0.75949626 1 225395723 225398064 2342 + 0.343 0.437 0.529
ENSG00000185842 E134 6.8849695 0.1655319756 0.122445906 0.31966381 1 225398520 225398666 147 + 0.737 1.046 1.181
ENSG00000185842 E135 5.8320574 0.1696736177 0.316434309 0.55644770 1 225399054 225399292 239 + 0.714 0.950 0.921