ENSG00000169045

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000329433 ENSG00000169045 HEK293_OSMI2_6hA HEK293_TMG_6hB HNRNPH1 protein_coding protein_coding 522.8491 260.3046 828.5102 29.03041 41.35529 1.67028 18.65467 21.57258 13.73524 6.779121 2.408261 -0.6509349 0.05034167 0.07936667 0.01696667 -0.06240000 0.02295748 0.0001534123 FALSE TRUE
ENST00000393432 ENSG00000169045 HEK293_OSMI2_6hA HEK293_TMG_6hB HNRNPH1 protein_coding protein_coding 522.8491 260.3046 828.5102 29.03041 41.35529 1.67028 41.49677 28.77479 63.29999 8.344742 16.066894 1.1371264 0.08335000 0.10610000 0.07840000 -0.02770000 0.84240078 0.0001534123 FALSE TRUE
ENST00000442819 ENSG00000169045 HEK293_OSMI2_6hA HEK293_TMG_6hB HNRNPH1 protein_coding protein_coding 522.8491 260.3046 828.5102 29.03041 41.35529 1.67028 105.50954 68.17912 151.29596 17.796176 3.916383 1.1498554 0.20749583 0.25323333 0.18306667 -0.07016667 0.72619436 0.0001534123 FALSE TRUE
ENST00000510411 ENSG00000169045 HEK293_OSMI2_6hA HEK293_TMG_6hB HNRNPH1 protein_coding protein_coding 522.8491 260.3046 828.5102 29.03041 41.35529 1.67028 53.52131 36.72517 75.57036 7.166195 4.504286 1.0408493 0.12742083 0.13946667 0.09113333 -0.04833333 0.34869661 0.0001534123 FALSE TRUE
ENST00000523921 ENSG00000169045 HEK293_OSMI2_6hA HEK293_TMG_6hB HNRNPH1 protein_coding protein_coding 522.8491 260.3046 828.5102 29.03041 41.35529 1.67028 38.76121 11.88530 67.12888 7.784167 5.193203 2.4967573 0.05933333 0.04310000 0.08176667 0.03866667 0.81352294 0.0001534123 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000169045 E001 3.4714399 1.472239e+00 6.763605e-01 8.204290e-01 5 179614178 179614178 1 - 0.545 0.763 0.936
ENSG00000169045 E002 18.3238692 2.959513e-02 5.056267e-01 7.046888e-01 5 179614179 179614179 1 - 1.252 1.341 0.309
ENSG00000169045 E003 29.3192490 5.099145e-02 1.468594e-01 3.577943e-01 5 179614180 179614180 1 - 1.373 1.601 0.782
ENSG00000169045 E004 61.2347109 6.537665e-03 4.314434e-02 1.629250e-01 5 179614181 179614194 14 - 1.744 1.868 0.420
ENSG00000169045 E005 1733.5742084 5.387753e-03 9.048829e-05 1.374507e-03 5 179614195 179614518 324 - 3.156 3.324 0.559
ENSG00000169045 E006 1186.3170455 5.313346e-04 2.621965e-13 3.012652e-11 5 179614519 179614523 5 - 3.026 3.140 0.377
ENSG00000169045 E007 2526.6893499 1.430364e-03 4.296748e-08 1.739420e-06 5 179614524 179614685 162 - 3.345 3.466 0.401
ENSG00000169045 E008 1955.3906186 1.731978e-03 1.225236e-10 8.524101e-09 5 179614686 179614777 92 - 3.216 3.373 0.520
ENSG00000169045 E009 1662.1835881 3.119850e-03 5.401280e-09 2.689916e-07 5 179614778 179614876 99 - 3.129 3.317 0.627
ENSG00000169045 E010 1134.5059549 6.075792e-04 6.771950e-04 7.243845e-03 5 179614877 179614889 13 - 3.034 3.088 0.179
ENSG00000169045 E011 1507.6686679 8.547901e-05 9.094194e-08 3.407774e-06 5 179614890 179614959 70 - 3.166 3.210 0.146
ENSG00000169045 E012 77.0479798 7.268707e-02 3.686151e-01 6.029195e-01 5 179614960 179615545 586 - 1.936 1.804 -0.444
ENSG00000169045 E013 941.7136017 3.524089e-04 9.288709e-02 2.690953e-01 5 179615546 179615559 14 - 2.971 2.989 0.059
ENSG00000169045 E014 1105.5265956 8.066881e-05 2.790436e-04 3.520394e-03 5 179615560 179615595 36 - 3.039 3.069 0.101
ENSG00000169045 E015 84.0999983 1.280158e-01 1.962146e-01 4.248204e-01 5 179615596 179616125 530 - 2.004 1.775 -0.770
ENSG00000169045 E016 1060.2657453 3.691713e-04 1.393501e-05 2.794537e-04 5 179616126 179616140 15 - 3.005 3.064 0.193
ENSG00000169045 E017 1020.8193634 8.611559e-04 1.286685e-05 2.610306e-04 5 179616141 179616157 17 - 2.976 3.057 0.269
ENSG00000169045 E018 1358.7535913 4.773588e-04 1.045159e-07 3.856844e-06 5 179616158 179616218 61 - 3.104 3.178 0.247
ENSG00000169045 E019 278.6948752 1.393000e-01 3.738034e-01 6.071834e-01 5 179616219 179616763 545 - 2.490 2.357 -0.445
ENSG00000169045 E020 53.8090549 1.099098e-01 6.748857e-01 8.194762e-01 5 179616764 179616859 96 - 1.761 1.692 -0.233
ENSG00000169045 E021 28.9993902 3.120178e-02 1.000000e+00 1.000000e+00 5 179616860 179616868 9 - 1.489 1.455 -0.117
ENSG00000169045 E022 693.9920941 9.384553e-04 1.201603e-03 1.144346e-02 5 179616869 179616873 5 - 2.817 2.883 0.219
ENSG00000169045 E023 952.0246972 1.599645e-04 8.438474e-04 8.643748e-03 5 179616874 179616898 25 - 2.972 3.006 0.113
ENSG00000169045 E024 1283.3008962 1.621183e-03 1.645738e-01 3.834779e-01 5 179616899 179616958 60 - 3.091 3.126 0.116
ENSG00000169045 E025 182.9851641 1.151990e-01 9.419164e-02 2.715265e-01 5 179616959 179617020 62 - 2.354 2.070 -0.950
ENSG00000169045 E026 325.5935055 1.711027e-02 3.384307e-02 1.384396e-01 5 179617021 179617050 30 - 2.569 2.405 -0.545
ENSG00000169045 E027 958.8778798 2.889896e-03 9.913401e-01 9.974263e-01 5 179617051 179617059 9 - 2.977 2.981 0.012
ENSG00000169045 E028 897.9549559 1.639529e-03 6.228944e-01 7.857594e-01 5 179617060 179617110 51 - 2.957 2.944 -0.042
ENSG00000169045 E029 75.1472108 2.608107e-01 3.549332e-01 5.916819e-01 5 179617111 179617513 403 - 1.933 1.776 -0.529
ENSG00000169045 E030 1432.1105010 4.178849e-03 8.433694e-01 9.213122e-01 5 179617514 179617649 136 - 3.146 3.158 0.043
ENSG00000169045 E031 860.0479443 5.677061e-03 9.760152e-01 9.898053e-01 5 179617799 179617816 18 - 2.928 2.932 0.014
ENSG00000169045 E032 1799.0325611 3.439003e-04 6.724004e-01 8.178502e-01 5 179617817 179617911 95 - 3.261 3.251 -0.034
ENSG00000169045 E033 1130.4017844 4.276158e-04 4.859716e-02 1.763707e-01 5 179617912 179617932 21 - 3.072 3.036 -0.119
ENSG00000169045 E034 111.0048266 1.608581e-01 2.573346e-02 1.144883e-01 5 179617933 179617988 56 - 2.178 1.722 -1.530
ENSG00000169045 E035 1501.2615125 4.001674e-04 2.926144e-01 5.333089e-01 5 179617989 179618044 56 - 3.188 3.168 -0.064
ENSG00000169045 E036 1291.2742869 1.651231e-04 2.256266e-01 4.600824e-01 5 179618045 179618060 16 - 3.127 3.104 -0.079
ENSG00000169045 E037 19.3865025 1.984107e-02 2.141723e-01 4.465663e-01 5 179618144 179618144 1 - 1.367 1.221 -0.511
ENSG00000169045 E038 1427.9576630 1.891233e-04 7.587723e-01 8.718155e-01 5 179618145 179618160 16 - 3.166 3.154 -0.040
ENSG00000169045 E039 1733.1503964 7.897911e-05 4.337015e-01 6.540309e-01 5 179618161 179618204 44 - 3.254 3.236 -0.060
ENSG00000169045 E040 1318.6777147 1.461801e-04 3.104912e-01 5.509774e-01 5 179618205 179618207 3 - 3.136 3.115 -0.071
ENSG00000169045 E041 1397.3155742 1.019268e-04 7.435465e-01 8.626928e-01 5 179618208 179618217 10 - 3.156 3.149 -0.023
ENSG00000169045 E042 1252.5353126 1.258317e-04 5.966854e-01 7.680898e-01 5 179618218 179618223 6 - 3.112 3.096 -0.054
ENSG00000169045 E043 1187.9577317 1.358020e-04 4.132339e-01 6.385265e-01 5 179618224 179618235 12 - 3.090 3.071 -0.065
ENSG00000169045 E044 1060.2903723 1.055997e-04 1.452665e-01 3.552955e-01 5 179618236 179618238 3 - 3.045 3.017 -0.094
ENSG00000169045 E045 1898.4943848 1.157032e-04 2.455624e-01 4.830719e-01 5 179618239 179618323 85 - 3.284 3.286 0.006
ENSG00000169045 E046 860.4735771 1.137862e-01 2.096230e-01 4.414379e-01 5 179618324 179619100 777 - 2.999 2.801 -0.661
ENSG00000169045 E047 348.6754303 1.342650e-01 1.692356e-01 3.895684e-01 5 179619101 179619268 168 - 2.618 2.386 -0.774
ENSG00000169045 E048 924.1577129 1.954917e-03 1.691749e-01 3.894719e-01 5 179619269 179619272 4 - 2.948 2.986 0.127
ENSG00000169045 E049 1361.5924753 1.406170e-03 1.325620e-01 3.358559e-01 5 179619273 179619300 28 - 3.118 3.152 0.115
ENSG00000169045 E050 1119.4117504 1.215850e-03 3.981056e-01 6.268111e-01 5 179619301 179619314 14 - 3.041 3.058 0.058
ENSG00000169045 E051 1506.6534704 7.115406e-04 8.948729e-01 9.491799e-01 5 179619315 179619360 46 - 3.178 3.178 0.002
ENSG00000169045 E052 1432.5281717 1.417547e-03 1.687522e-01 3.889245e-01 5 179619361 179619407 47 - 3.166 3.136 -0.099
ENSG00000169045 E053 179.0678644 1.440904e-01 1.419374e-01 3.503521e-01 5 179619408 179619468 61 - 2.338 2.076 -0.875
ENSG00000169045 E054 348.2163058 1.326151e-01 9.481015e-02 2.726386e-01 5 179619469 179620037 569 - 2.634 2.340 -0.980
ENSG00000169045 E055 181.0510024 2.294721e-01 7.327528e-02 2.313624e-01 5 179620675 179620732 58 - 2.373 1.991 -1.278
ENSG00000169045 E056 175.0792982 2.168337e-01 7.530456e-02 2.354380e-01 5 179620733 179620772 40 - 2.357 1.982 -1.253
ENSG00000169045 E057 195.4180770 1.888732e-01 6.210294e-02 2.075104e-01 5 179620773 179620813 41 - 2.405 2.026 -1.268
ENSG00000169045 E058 240.2545576 1.798745e-01 7.467730e-02 2.341480e-01 5 179620814 179620891 78 - 2.488 2.138 -1.169
ENSG00000169045 E059 1193.1579648 1.415400e-03 7.273812e-02 2.302614e-01 5 179620892 179620896 5 - 3.091 3.050 -0.138
ENSG00000169045 E060 1605.4710147 2.189142e-03 3.814671e-02 1.499928e-01 5 179620897 179620942 46 - 3.222 3.170 -0.175
ENSG00000169045 E061 1693.4634691 6.822739e-04 7.517060e-05 1.177973e-03 5 179620943 179621010 68 - 3.255 3.188 -0.223
ENSG00000169045 E062 1190.1011697 8.804926e-04 1.837329e-07 6.396488e-06 5 179621011 179621035 25 - 3.115 3.014 -0.337
ENSG00000169045 E063 144.4410668 2.607021e-01 1.958850e-01 4.244329e-01 5 179621036 179621241 206 - 2.243 1.991 -0.842
ENSG00000169045 E064 950.9277782 2.009295e-03 6.248889e-06 1.396506e-04 5 179621242 179621253 12 - 3.022 2.902 -0.402
ENSG00000169045 E065 1999.1670721 1.888914e-03 6.306586e-03 4.123367e-02 5 179621254 179621346 93 - 3.322 3.258 -0.211
ENSG00000169045 E066 1193.3115445 7.806930e-04 4.964339e-02 1.787729e-01 5 179621347 179621370 24 - 3.093 3.054 -0.128
ENSG00000169045 E067 1313.6695853 2.735658e-04 3.364597e-04 4.103899e-03 5 179621371 179621397 27 - 3.145 3.090 -0.181
ENSG00000169045 E068 228.4476977 2.134342e-01 1.705390e-01 3.911648e-01 5 179621398 179621686 289 - 2.442 2.185 -0.858
ENSG00000169045 E069 117.6763796 2.537316e-01 2.816633e-01 5.220038e-01 5 179621843 179621950 108 - 2.136 1.947 -0.634
ENSG00000169045 E070 73.6039850 2.664508e-01 3.078749e-01 5.485014e-01 5 179621951 179621976 26 - 1.933 1.749 -0.620
ENSG00000169045 E071 17.5084271 7.239982e-01 4.596328e-01 6.728612e-01 5 179622849 179622951 103 - 1.264 1.258 -0.023
ENSG00000169045 E072 61.8417242 3.947184e-01 1.737633e-01 3.955578e-01 5 179622952 179623036 85 - 1.889 1.597 -0.988
ENSG00000169045 E073 1176.2948193 2.504071e-04 1.951169e-03 1.674178e-02 5 179623037 179623048 12 - 3.096 3.046 -0.164
ENSG00000169045 E074 1905.8356680 5.284236e-04 1.058038e-03 1.035377e-02 5 179623049 179623164 116 - 3.301 3.250 -0.170
ENSG00000169045 E075 21.1063959 3.278838e-02 7.619663e-02 2.371253e-01 5 179623165 179623187 23 - 1.426 1.221 -0.716
ENSG00000169045 E076 4.1475073 8.641170e-01 1.000000e+00 1.000000e+00 5 179623188 179623280 93 - 0.616 0.811 0.806
ENSG00000169045 E077 12.0817816 3.047193e-01 1.000000e+00 1.000000e+00 5 179623281 179623594 314 - 1.046 1.193 0.530
ENSG00000169045 E078 631.2436245 5.657075e-03 3.425811e-02 1.395595e-01 5 179623595 179623635 41 - 2.834 2.738 -0.318
ENSG00000169045 E079 1001.3741099 9.111391e-04 4.205251e-04 4.930942e-03 5 179623636 179623977 342 - 3.031 2.957 -0.247
ENSG00000169045 E080 0.6238610 2.741297e+00 9.025081e-01   5 179623978 179624096 119 - 0.186 0.243 0.487
ENSG00000169045 E081 0.9153370 3.432418e+00 6.131098e-01   5 179624097 179624115 19 - 0.108 0.447 2.667
ENSG00000169045 E082 0.9990895 3.515361e+00 5.727084e-01   5 179624116 179624202 87 - 0.000 0.536 13.087
ENSG00000169045 E083 0.3926045 4.815928e+00 8.993583e-01   5 179624203 179624316 114 - 0.000 0.298 11.718
ENSG00000169045 E084 5.7027057 1.796715e+00 9.956424e-01 9.994253e-01 5 179624317 179624669 353 - 0.642 0.992 1.381
ENSG00000169045 E085 0.1779838 5.690872e+00 8.785667e-01   5 179633892 179634064 173 - 0.110 0.000 -9.800
ENSG00000169045 E086 4.4327902 1.519559e+00 6.861866e-01 8.266247e-01 5 179634065 179634157 93 - 0.658 0.820 0.662
ENSG00000169045 E087 1.1840381 1.819187e+00 7.917415e-01   5 179634158 179634440 283 - 0.247 0.450 1.248
ENSG00000169045 E088 1.7930487 1.280267e+00 7.483738e-01 8.657232e-01 5 179634449 179634784 336 - 0.358 0.538 0.939