ENSG00000168385

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000391971 ENSG00000168385 HEK293_OSMI2_6hA HEK293_TMG_6hB SEPTIN2 protein_coding protein_coding 161.3018 57.05832 265.6959 11.5429 10.449 2.219068 92.728595 32.026148 158.547668 7.870979 5.937610 2.307235 0.54202917 0.54753333 0.59683333 0.04930000 7.774729e-01 1.538971e-29 FALSE TRUE
ENST00000391973 ENSG00000168385 HEK293_OSMI2_6hA HEK293_TMG_6hB SEPTIN2 protein_coding protein_coding 161.3018 57.05832 265.6959 11.5429 10.449 2.219068 12.252629 6.122120 22.128283 1.619443 1.209191 1.852086 0.07540000 0.10413333 0.08316667 -0.02096667 6.601839e-01 1.538971e-29 FALSE TRUE
ENST00000441533 ENSG00000168385 HEK293_OSMI2_6hA HEK293_TMG_6hB SEPTIN2 protein_coding protein_coding 161.3018 57.05832 265.6959 11.5429 10.449 2.219068 9.075283 0.000000 18.817264 0.000000 1.778245 10.878608 0.03483750 0.00000000 0.07056667 0.07056667 1.538971e-29 1.538971e-29   FALSE
ENST00000451310 ENSG00000168385 HEK293_OSMI2_6hA HEK293_TMG_6hB SEPTIN2 protein_coding protein_coding 161.3018 57.05832 265.6959 11.5429 10.449 2.219068 6.785691 5.512945 0.000000 2.835973 0.000000 -9.109294 0.10126250 0.09013333 0.00000000 -0.09013333 5.737977e-16 1.538971e-29   FALSE
MSTRG.20184.20 ENSG00000168385 HEK293_OSMI2_6hA HEK293_TMG_6hB SEPTIN2 protein_coding   161.3018 57.05832 265.6959 11.5429 10.449 2.219068 8.158194 3.430250 9.611675 1.009696 1.559066 1.483775 0.05528333 0.05890000 0.03670000 -0.02220000 5.634369e-01 1.538971e-29 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000168385 E001 0.5775531 1.985367e-02 8.437994e-01   2 241315100 241315269 170 + 0.167 0.221 0.503
ENSG00000168385 E002 3.9834734 3.946475e-01 5.219535e-01 7.162805e-01 2 241315270 241315288 19 + 0.576 0.783 0.873
ENSG00000168385 E003 32.4915243 1.483533e-02 8.227193e-03 5.036650e-02 2 241315289 241315354 66 + 1.365 1.641 0.947
ENSG00000168385 E004 91.4511408 3.507122e-02 5.323564e-01 7.237569e-01 2 241315355 241315446 92 + 1.840 1.969 0.433
ENSG00000168385 E005 167.1334393 7.413160e-02 2.422456e-01 4.790441e-01 2 241315447 241315578 132 + 2.087 2.255 0.562
ENSG00000168385 E006 95.3415037 1.393358e+00 4.829939e-01 6.891368e-01 2 241315579 241315610 32 + 1.830 2.054 0.754
ENSG00000168385 E007 0.0000000       2 241315861 241315863 3 +      
ENSG00000168385 E008 0.0000000       2 241315864 241315874 11 +      
ENSG00000168385 E009 0.0000000       2 241315875 241315881 7 +      
ENSG00000168385 E010 0.0000000       2 241315882 241315882 1 +      
ENSG00000168385 E011 0.0000000       2 241315883 241315893 11 +      
ENSG00000168385 E012 1.0371518 2.688487e-02 1.213365e-01   2 241315894 241315900 7 + 0.167 0.477 2.089
ENSG00000168385 E013 1.3412022 1.589732e-02 2.854631e-01   2 241315901 241315903 3 + 0.251 0.477 1.352
ENSG00000168385 E014 1.3412022 1.589732e-02 2.854631e-01   2 241315904 241315904 1 + 0.251 0.477 1.352
ENSG00000168385 E015 1.3412022 1.589732e-02 2.854631e-01   2 241315905 241315905 1 + 0.251 0.477 1.352
ENSG00000168385 E016 4.1840786 5.888901e-03 4.911734e-01 6.947853e-01 2 241315906 241315912 7 + 0.648 0.564 -0.371
ENSG00000168385 E017 12.3718533 3.203359e-03 5.044864e-01 7.039315e-01 2 241315913 241315920 8 + 1.048 1.013 -0.128
ENSG00000168385 E018 16.7262133 2.883376e-03 9.466091e-01 9.756033e-01 2 241315921 241315923 3 + 1.155 1.193 0.136
ENSG00000168385 E019 17.0903632 2.280145e-03 9.411596e-01 9.728141e-01 2 241315924 241315924 1 + 1.160 1.212 0.184
ENSG00000168385 E020 18.8900168 2.119625e-03 9.895904e-01 9.965391e-01 2 241315925 241315927 3 + 1.200 1.246 0.161
ENSG00000168385 E021 28.6817709 1.461265e-03 5.745805e-01 7.533797e-01 2 241315928 241315934 7 + 1.363 1.451 0.305
ENSG00000168385 E022 29.8853978 1.740908e-03 4.419386e-01 6.600589e-01 2 241315935 241315935 1 + 1.377 1.480 0.357
ENSG00000168385 E023 74.3359146 5.359986e-04 5.248383e-02 1.854356e-01 2 241315936 241315943 8 + 1.750 1.889 0.469
ENSG00000168385 E024 80.3437229 5.456704e-04 6.929244e-02 2.233607e-01 2 241315944 241315945 2 + 1.784 1.914 0.440
ENSG00000168385 E025 90.6889179 4.525607e-04 2.339555e-01 4.696949e-01 2 241315946 241315950 5 + 1.843 1.942 0.332
ENSG00000168385 E026 93.4144577 4.386005e-04 2.595504e-01 4.985209e-01 2 241315951 241315952 2 + 1.857 1.952 0.320
ENSG00000168385 E027 146.1732446 3.090479e-04 4.735781e-01 6.825001e-01 2 241315953 241315958 6 + 2.064 2.084 0.066
ENSG00000168385 E028 236.6748603 2.616381e-04 2.846583e-05 5.156979e-04 2 241315959 241315982 24 + 2.289 2.208 -0.273
ENSG00000168385 E029 2.0100132 2.283206e-01 8.674859e-03 5.235963e-02 2 241316003 241316169 167 + 0.210 0.837 3.235
ENSG00000168385 E030 5.8248664 2.710386e-02 4.725227e-02 1.731587e-01 2 241316170 241316315 146 + 0.662 0.986 1.273
ENSG00000168385 E031 6.6152574 6.379041e-03 8.872990e-02 2.614609e-01 2 241316316 241316421 106 + 0.718 0.985 1.038
ENSG00000168385 E032 6.3649979 7.501411e-03 9.942185e-01 9.986814e-01 2 241316422 241316429 8 + 0.767 0.802 0.139
ENSG00000168385 E033 9.6791711 1.656530e-02 7.205521e-01 8.485735e-01 2 241316430 241316482 53 + 0.937 0.922 -0.060
ENSG00000168385 E034 10.6065189 5.925929e-02 9.739463e-01 9.888469e-01 2 241316483 241316540 58 + 0.966 0.989 0.086
ENSG00000168385 E035 2.9981191 3.911994e-02 2.769518e-01 5.169688e-01 2 241316541 241316550 10 + 0.563 0.367 -0.995
ENSG00000168385 E036 3.1595348 6.323750e-02 2.659274e-01 5.053668e-01 2 241316551 241316555 5 + 0.580 0.368 -1.076
ENSG00000168385 E037 1.5368198 1.374882e-02 6.714474e-02 2.187111e-01 2 241316556 241316575 20 + 0.409 0.000 -17.202
ENSG00000168385 E038 72.7810540 5.298190e-04 3.293113e-02 1.358746e-01 2 241317499 241317599 101 + 1.781 1.712 -0.234
ENSG00000168385 E039 2.2673256 3.464204e-01 2.188447e-01 4.520393e-01 2 241318237 241318344 108 + 0.360 0.689 1.588
ENSG00000168385 E040 7.6197344 3.979928e-03 2.625910e-01 5.018060e-01 2 241320203 241320287 85 + 0.801 0.985 0.703
ENSG00000168385 E041 11.7860045 6.893556e-03 2.827038e-01 5.231344e-01 2 241324154 241324215 62 + 0.975 1.135 0.583
ENSG00000168385 E042 424.6657115 2.057941e-03 1.760353e-01 3.985129e-01 2 241324216 241324241 26 + 2.529 2.528 -0.006
ENSG00000168385 E043 12.6759461 2.265472e-01 1.303776e-01 3.324002e-01 2 241324409 241324662 254 + 0.914 1.363 1.615
ENSG00000168385 E044 8.3107819 2.058141e-01 9.267004e-03 5.496858e-02 2 241324663 241325244 582 + 0.646 1.309 2.500
ENSG00000168385 E045 2.6542007 1.606500e-01 9.687937e-02 2.762558e-01 2 241325967 241325992 26 + 0.386 0.754 1.711
ENSG00000168385 E046 821.1037749 9.565047e-05 1.314024e-05 2.660365e-04 2 241325993 241326113 121 + 2.819 2.795 -0.078
ENSG00000168385 E047 821.2236238 3.628630e-04 1.466580e-05 2.922886e-04 2 241335126 241335212 87 + 2.820 2.788 -0.107
ENSG00000168385 E048 12.3463557 3.404247e-02 2.810260e-01 5.212793e-01 2 241335213 241335321 109 + 0.990 1.159 0.614
ENSG00000168385 E049 6.9539888 3.054490e-01 3.865798e-01 6.177640e-01 2 241335322 241335351 30 + 0.769 0.962 0.745
ENSG00000168385 E050 14.5643750 1.715699e-01 4.020376e-01 6.300836e-01 2 241335352 241335640 289 + 1.060 1.239 0.640
ENSG00000168385 E051 11.8550052 3.591195e-01 4.649113e-01 6.765262e-01 2 241335843 241335945 103 + 0.926 1.259 1.206
ENSG00000168385 E052 7.4028728 4.078838e-01 4.391710e-01 6.581197e-01 2 241335946 241335958 13 + 0.772 1.022 0.954
ENSG00000168385 E053 9.8443270 2.439921e-01 5.625960e-01 7.450926e-01 2 241335959 241335974 16 + 0.899 1.077 0.658
ENSG00000168385 E054 752.2347667 6.000638e-04 6.001202e-03 3.972954e-02 2 241335975 241336098 124 + 2.778 2.768 -0.031
ENSG00000168385 E055 12.6464304 1.918803e-01 7.507343e-02 2.349865e-01 2 241336099 241336381 283 + 0.908 1.366 1.649
ENSG00000168385 E056 16.2785456 1.898736e-01 4.353911e-01 6.552720e-01 2 241336785 241337098 314 + 1.083 1.326 0.861
ENSG00000168385 E057 9.1464731 1.475581e-01 5.159223e-02 1.835253e-01 2 241337311 241337381 71 + 0.789 1.229 1.629
ENSG00000168385 E058 696.3470959 1.071787e-03 1.036534e-03 1.018638e-02 2 241337382 241337475 94 + 2.748 2.720 -0.094
ENSG00000168385 E059 637.4341286 4.858053e-03 1.966455e-03 1.684401e-02 2 241337476 241337516 41 + 2.716 2.652 -0.212
ENSG00000168385 E060 18.2667134 2.107570e-01 5.744573e-01 7.533067e-01 2 241337517 241337672 156 + 1.141 1.347 0.728
ENSG00000168385 E061 750.2371254 1.435293e-04 8.611889e-12 7.496140e-10 2 241337673 241337719 47 + 2.788 2.717 -0.239
ENSG00000168385 E062 878.1636693 1.261323e-04 9.766231e-11 6.933656e-09 2 241337720 241337790 71 + 2.854 2.798 -0.187
ENSG00000168385 E063 1003.0496652 4.913782e-04 4.632061e-04 5.339241e-03 2 241342992 241343093 102 + 2.904 2.890 -0.047
ENSG00000168385 E064 1143.1132863 3.309100e-04 2.766833e-05 5.026981e-04 2 241343752 241343897 146 + 2.961 2.942 -0.063
ENSG00000168385 E065 966.5911439 5.233938e-04 1.029687e-03 1.014073e-02 2 241346166 241346249 84 + 2.888 2.875 -0.043
ENSG00000168385 E066 16.6156433 2.101758e-01 3.382162e-01 5.764293e-01 2 241346250 241346602 353 + 1.077 1.369 1.035
ENSG00000168385 E067 720.8120685 1.851010e-03 1.770461e-01 3.998253e-01 2 241348134 241348191 58 + 2.756 2.766 0.033
ENSG00000168385 E068 426.5888823 7.592177e-04 6.504369e-01 8.038067e-01 2 241350073 241350086 14 + 2.524 2.560 0.121
ENSG00000168385 E069 721.5088375 1.201990e-03 7.108349e-01 8.423648e-01 2 241350087 241350203 117 + 2.751 2.791 0.133
ENSG00000168385 E070 15.1790480 2.548900e-02 7.961568e-02 2.440561e-01 2 241351943 241351966 24 + 1.057 1.296 0.851
ENSG00000168385 E071 5768.6070022 1.881858e-03 2.363888e-09 1.282974e-07 2 241351967 241354027 2061 + 3.630 3.764 0.446