ENSG00000168137

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000407969 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding protein_coding 42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 5.3842196 7.809752 8.241818 1.2387201 0.7611328 0.07758919 0.13007500 0.13910000 0.20620000 0.06710000 3.256220e-01 1.015911e-27 FALSE TRUE
ENST00000421188 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding protein_coding 42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 2.6944414 5.277484 0.000000 2.3665605 0.0000000 -9.04643762 0.05914583 0.08690000 0.00000000 -0.08690000 2.859195e-06 1.015911e-27 FALSE TRUE
ENST00000466826 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding retained_intron 42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 9.1916076 15.885613 0.000000 3.5652925 0.0000000 -10.63441295 0.19649167 0.27706667 0.00000000 -0.27706667 1.015911e-27 1.015911e-27 FALSE FALSE
ENST00000492939 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding retained_intron 42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 2.0819302 3.046792 0.000000 0.4630024 0.0000000 -8.25587474 0.04761250 0.05840000 0.00000000 -0.05840000 1.247616e-10 1.015911e-27 FALSE TRUE
MSTRG.22446.11 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding   42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 0.6794379 0.000000 2.104028 0.0000000 0.3329734 7.72385054 0.01878333 0.00000000 0.05260000 0.05260000 7.568122e-16 1.015911e-27 FALSE TRUE
MSTRG.22446.15 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding   42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 2.8181268 1.475549 4.563089 0.7994460 0.7510560 1.62217252 0.07226667 0.02363333 0.11546667 0.09183333 4.674253e-01 1.015911e-27 FALSE TRUE
MSTRG.22446.16 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding   42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 2.5107896 2.632538 2.601057 1.3722844 0.8618085 -0.01729048 0.06065417 0.04220000 0.06326667 0.02106667 8.679699e-01 1.015911e-27 FALSE TRUE
MSTRG.22446.7 ENSG00000168137 HEK293_OSMI2_6hA HEK293_TMG_6hB SETD5 protein_coding   42.15489 55.68279 40.27126 6.553799 2.452436 -0.4673815 2.6078135 2.962818 3.349632 0.3863746 0.1908868 0.17647184 0.06573750 0.05306667 0.08393333 0.03086667 1.661931e-01 1.015911e-27 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000168137 E001 0.0000000       3 9397550 9397580 31 +      
ENSG00000168137 E002 0.2027342 0.0364399706 5.813989e-01   3 9397581 9397614 34 + 0.000 0.115 12.380
ENSG00000168137 E003 6.4966852 0.0045832267 3.453594e-01 5.829263e-01 3 9397615 9397799 185 + 0.914 0.830 -0.324
ENSG00000168137 E004 3.7550911 0.0068987391 8.965139e-01 9.500935e-01 3 9397800 9397804 5 + 0.647 0.694 0.200
ENSG00000168137 E005 8.5464242 0.0034627960 7.400088e-01 8.604446e-01 3 9397805 9397826 22 + 0.982 0.977 -0.016
ENSG00000168137 E006 10.4202201 0.0028416070 6.515363e-01 8.045230e-01 3 9397827 9397840 14 + 1.066 1.053 -0.047
ENSG00000168137 E007 14.4619651 0.0022791501 5.533940e-01 7.386212e-01 3 9397841 9397855 15 + 1.137 1.224 0.309
ENSG00000168137 E008 15.0693257 0.0022481142 8.793421e-01 9.409558e-01 3 9397856 9397862 7 + 1.188 1.208 0.071
ENSG00000168137 E009 16.6557773 0.0023613091 4.185438e-01 6.425320e-01 3 9397863 9397872 10 + 1.259 1.225 -0.123
ENSG00000168137 E010 23.6475483 0.0025363451 1.038882e-01 2.886648e-01 3 9397873 9397880 8 + 1.428 1.341 -0.298
ENSG00000168137 E011 29.7045133 0.0031860366 6.346522e-02 2.105132e-01 3 9397881 9397890 10 + 1.527 1.434 -0.320
ENSG00000168137 E012 29.7023005 0.0023388380 5.662599e-02 1.951498e-01 3 9397891 9397895 5 + 1.527 1.433 -0.321
ENSG00000168137 E013 32.5717420 0.0013361485 4.527735e-02 1.682966e-01 3 9397896 9397899 4 + 1.565 1.475 -0.310
ENSG00000168137 E014 32.3522519 0.0012809531 5.265678e-02 1.858765e-01 3 9397900 9397903 4 + 1.561 1.474 -0.296
ENSG00000168137 E015 52.9872311 0.0009422506 3.625854e-02 1.449482e-01 3 9397904 9397977 74 + 1.761 1.692 -0.233
ENSG00000168137 E016 0.4161375 0.1434466554 4.900276e-01   3 9415698 9415732 35 + 0.225 0.114 -1.181
ENSG00000168137 E017 3.2638450 0.0460136409 2.503134e-01 4.882889e-01 3 9421323 9421478 156 + 0.709 0.536 -0.757
ENSG00000168137 E018 7.2433707 0.0781484520 3.832272e-01 6.149154e-01 3 9421479 9421545 67 + 0.980 0.849 -0.496
ENSG00000168137 E019 5.5717386 0.2018237241 8.418032e-01 9.204604e-01 3 9421546 9421592 47 + 0.794 0.830 0.142
ENSG00000168137 E020 24.8597586 0.0016746242 3.007666e-01 5.412373e-01 3 9422723 9423107 385 + 1.438 1.402 -0.127
ENSG00000168137 E021 13.6379669 0.0340260748 1.219548e-01 3.189948e-01 3 9423108 9423257 150 + 1.250 1.099 -0.536
ENSG00000168137 E022 0.1779838 0.0350153739 4.041239e-01   3 9424218 9424466 249 + 0.128 0.000 -15.545
ENSG00000168137 E023 70.0123506 0.0012220096 3.061112e-03 2.377858e-02 3 9424467 9424526 60 + 1.900 1.804 -0.323
ENSG00000168137 E024 2.0096061 0.0694029612 1.430069e-02 7.552354e-02 3 9424527 9424539 13 + 0.650 0.206 -2.516
ENSG00000168137 E025 0.1779838 0.0350153739 4.041239e-01   3 9426089 9426175 87 + 0.128 0.000 -15.545
ENSG00000168137 E026 106.6744659 0.0005215359 3.415938e-04 4.155479e-03 3 9428823 9428924 102 + 2.077 1.987 -0.303
ENSG00000168137 E027 124.3538149 0.0010813922 1.093025e-06 3.068112e-05 3 9428925 9429009 85 + 2.164 2.029 -0.453
ENSG00000168137 E028 3.2540017 0.0077528780 4.917644e-02 1.776190e-01 3 9429010 9429325 316 + 0.764 0.494 -1.182
ENSG00000168137 E029 2.1234085 0.1273533136 1.907651e-01 4.178443e-01 3 9429569 9429667 99 + 0.608 0.350 -1.300
ENSG00000168137 E030 144.2967354 0.0002927776 7.835546e-04 8.143051e-03 3 9429827 9430051 225 + 2.195 2.130 -0.216
ENSG00000168137 E031 68.4876897 0.0120553234 5.597517e-03 3.772021e-02 3 9430052 9431707 1656 + 1.917 1.762 -0.522
ENSG00000168137 E032 11.5662129 0.2474995896 2.325491e-02 1.067645e-01 3 9431708 9432324 617 + 1.285 0.829 -1.671
ENSG00000168137 E033 45.1083811 0.0008766034 4.264478e-02 1.616424e-01 3 9433370 9433484 115 + 1.703 1.631 -0.242
ENSG00000168137 E034 38.4156954 0.0009308270 3.475782e-01 5.849911e-01 3 9433485 9433531 47 + 1.607 1.589 -0.061
ENSG00000168137 E035 31.3224766 0.0014789563 6.998644e-01 8.355342e-01 3 9433532 9433562 31 + 1.509 1.520 0.038
ENSG00000168137 E036 166.4787844 0.0068340105 1.170579e-02 6.525875e-02 3 9433845 9433950 106 + 2.269 2.182 -0.289
ENSG00000168137 E037 1.5817723 0.0154853482 2.520056e-02 1.128209e-01 3 9433993 9434044 52 + 0.574 0.205 -2.186
ENSG00000168137 E038 8.6209460 0.0299855255 7.253996e-01 8.513972e-01 3 9434045 9434181 137 + 0.997 0.986 -0.044
ENSG00000168137 E039 1.1417919 0.2002782422 5.628961e-01   3 9434182 9434276 95 + 0.374 0.284 -0.570
ENSG00000168137 E040 86.2275863 0.0049474720 2.821516e-02 1.219137e-01 3 9434277 9434333 57 + 1.981 1.908 -0.245
ENSG00000168137 E041 246.2195432 0.0028868627 6.268145e-05 1.010322e-03 3 9434334 9434485 152 + 2.445 2.344 -0.337
ENSG00000168137 E042 10.0723886 0.1099328635 4.570139e-01 6.710545e-01 3 9434486 9434589 104 + 1.078 1.010 -0.248
ENSG00000168137 E043 19.3233029 0.0692885565 3.686514e-01 6.029499e-01 3 9434590 9434630 41 + 1.352 1.268 -0.291
ENSG00000168137 E044 12.0097892 0.1484472848 8.031421e-02 2.454771e-01 3 9434631 9434823 193 + 1.240 0.965 -0.993
ENSG00000168137 E045 157.6230533 0.0002960418 1.087556e-08 5.058670e-07 3 9434824 9434882 59 + 2.264 2.136 -0.429
ENSG00000168137 E046 0.7132229 0.1499944156 9.192687e-01   3 9434883 9434901 19 + 0.227 0.275 0.365
ENSG00000168137 E047 0.5530924 0.0242504250 6.913524e-01   3 9435646 9435727 82 + 0.128 0.206 0.822
ENSG00000168137 E048 230.3645285 0.0027363098 2.203458e-06 5.680885e-05 3 9435728 9435906 179 + 2.428 2.301 -0.423
ENSG00000168137 E049 0.1779838 0.0350153739 4.041239e-01   3 9436068 9436140 73 + 0.128 0.000 -15.545
ENSG00000168137 E050 17.5583245 0.0431145604 5.688177e-01 7.494168e-01 3 9436850 9436888 39 + 1.200 1.313 0.397
ENSG00000168137 E051 272.4644193 0.0001911423 1.355800e-13 1.644878e-11 3 9440456 9440698 243 + 2.500 2.374 -0.420
ENSG00000168137 E052 204.7352184 0.0010879624 1.377225e-05 2.765899e-04 3 9441593 9441741 149 + 2.358 2.267 -0.302
ENSG00000168137 E053 0.1779838 0.0350153739 4.041239e-01   3 9441742 9442127 386 + 0.128 0.000 -15.545
ENSG00000168137 E054 121.2937060 0.0016371745 1.475240e-04 2.068955e-03 3 9442128 9442166 39 + 2.139 2.034 -0.351
ENSG00000168137 E055 92.0826941 0.0005060621 1.435162e-03 1.314937e-02 3 9442167 9442169 3 + 2.009 1.924 -0.283
ENSG00000168137 E056 146.6566851 0.0002868662 6.092117e-07 1.843517e-05 3 9442170 9442245 76 + 2.224 2.112 -0.375
ENSG00000168137 E057 1.9588335 0.0243660749 8.279735e-01 9.126104e-01 3 9442246 9442614 369 + 0.434 0.495 0.306
ENSG00000168137 E058 1.1965423 0.0146955731 1.622896e-01   3 9442615 9442889 275 + 0.434 0.206 -1.501
ENSG00000168137 E059 2.5447725 0.0202012300 3.808609e-01 6.129136e-01 3 9442890 9443307 418 + 0.612 0.494 -0.547
ENSG00000168137 E060 152.4239768 0.0003815922 1.002718e-08 4.714412e-07 3 9443308 9443417 110 + 2.249 2.114 -0.449
ENSG00000168137 E061 2.7198625 0.0254718345 3.933242e-01 6.230284e-01 3 9443418 9444859 1442 + 0.646 0.533 -0.505
ENSG00000168137 E062 2.5350313 0.0094130651 9.400396e-01 9.722489e-01 3 9445045 9445047 3 + 0.532 0.571 0.178
ENSG00000168137 E063 317.0587909 0.0003014747 4.827269e-07 1.501650e-05 3 9445048 9445300 253 + 2.539 2.469 -0.232
ENSG00000168137 E064 1.1683953 0.4785838137 3.897814e-01   3 9445301 9445619 319 + 0.439 0.209 -1.498
ENSG00000168137 E065 1.9318702 0.0742916857 7.407768e-01 8.609176e-01 3 9445620 9445656 37 + 0.487 0.449 -0.188
ENSG00000168137 E066 202.5745694 0.0003058405 3.823908e-03 2.816078e-02 3 9445657 9445740 84 + 2.330 2.292 -0.127
ENSG00000168137 E067 0.3040503 0.0274424043 1.517110e-01   3 9446678 9447049 372 + 0.227 0.000 -16.669
ENSG00000168137 E068 136.5386184 0.0067836897 1.207004e-01 3.169635e-01 3 9447050 9447070 21 + 2.163 2.120 -0.146
ENSG00000168137 E069 300.9708324 0.0003201677 2.400961e-01 4.767142e-01 3 9447071 9447307 237 + 2.475 2.486 0.035
ENSG00000168137 E070 94.7393543 0.0005073217 3.987645e-01 6.272523e-01 3 9447686 9447686 1 + 1.944 2.011 0.225
ENSG00000168137 E071 337.4384323 0.0002532433 4.625350e-01 6.748493e-01 3 9447687 9447969 283 + 2.518 2.538 0.070
ENSG00000168137 E072 121.6477516 0.0003950250 4.310110e-01 6.519282e-01 3 9447970 9448006 37 + 2.083 2.093 0.033
ENSG00000168137 E073 0.9506365 0.3100755105 4.335444e-01   3 9448007 9448387 381 + 0.372 0.208 -1.138
ENSG00000168137 E074 249.3718052 0.0002228343 3.880551e-01 6.189717e-01 3 9448388 9448558 171 + 2.388 2.404 0.052
ENSG00000168137 E075 195.6765359 0.0012302956 4.424132e-01 6.603264e-01 3 9448559 9448630 72 + 2.284 2.296 0.039
ENSG00000168137 E076 1.6200541 0.0119998745 7.591211e-01 8.720280e-01 3 9449480 9449592 113 + 0.375 0.450 0.407
ENSG00000168137 E077 6.8731422 0.0043738563 8.024071e-01 8.977282e-01 3 9452888 9452951 64 + 0.856 0.918 0.234
ENSG00000168137 E078 228.7828462 0.0006613589 8.789687e-01 9.407345e-01 3 9453739 9453868 130 + 2.338 2.378 0.132
ENSG00000168137 E079 0.6378404 0.0252619256 2.303042e-01   3 9453869 9454004 136 + 0.307 0.115 -1.764
ENSG00000168137 E080 7.5699686 0.0656819466 7.401847e-01 8.605443e-01 3 9454005 9454101 97 + 0.895 0.964 0.260
ENSG00000168137 E081 0.7882974 0.3095385017 4.231423e-02   3 9454102 9454586 485 + 0.433 0.000 -16.789
ENSG00000168137 E082 2.9330072 0.3552940768 3.567625e-01 5.931478e-01 3 9464410 9464424 15 + 0.733 0.442 -1.317
ENSG00000168137 E083 357.5067118 0.0005627369 1.565049e-01 3.715827e-01 3 9464425 9464672 248 + 2.516 2.583 0.222
ENSG00000168137 E084 44.4307423 0.1440938774 8.208746e-02 2.489080e-01 3 9464673 9466248 1576 + 1.773 1.520 -0.862
ENSG00000168137 E085 62.2424078 0.1439560867 3.744968e-01 6.077225e-01 3 9467231 9468518 1288 + 1.826 1.775 -0.172
ENSG00000168137 E086 52.3445235 0.0007638440 9.635828e-01 9.837146e-01 3 9468519 9468575 57 + 1.703 1.740 0.126
ENSG00000168137 E087 115.4211257 0.1101968790 1.856187e-01 4.113681e-01 3 9468576 9470458 1883 + 2.127 2.002 -0.421
ENSG00000168137 E088 419.6708356 0.0019149749 3.065714e-01 5.472181e-01 3 9470459 9470666 208 + 2.586 2.650 0.210
ENSG00000168137 E089 380.9269109 0.0060310826 2.245354e-01 4.588504e-01 3 9470667 9470929 263 + 2.529 2.619 0.298
ENSG00000168137 E090 6.2013600 0.1433758102 1.496162e-01 3.617111e-01 3 9472472 9473235 764 + 0.978 0.720 -1.001
ENSG00000168137 E091 298.2058098 0.0048815200 6.534752e-02 2.146853e-01 3 9473236 9473394 159 + 2.411 2.523 0.371
ENSG00000168137 E092 176.0045374 0.0020075975 4.809272e-02 1.752006e-01 3 9473395 9473422 28 + 2.189 2.294 0.349
ENSG00000168137 E093 280.6736478 0.0007009659 2.137994e-02 1.005903e-01 3 9473423 9473537 115 + 2.399 2.492 0.309
ENSG00000168137 E094 4.3272902 0.1747973039 2.937753e-01 5.344095e-01 3 9473538 9474448 911 + 0.808 0.622 -0.766
ENSG00000168137 E095 295.2065410 0.0001860323 3.932861e-05 6.786814e-04 3 9474449 9474582 134 + 2.400 2.524 0.412
ENSG00000168137 E096 16.4939356 0.0319711114 2.064622e-02 9.817174e-02 3 9474583 9474793 211 + 1.354 1.118 -0.833
ENSG00000168137 E097 20.1921692 0.1254678869 2.339540e-01 4.696949e-01 3 9474794 9475049 256 + 1.395 1.253 -0.497
ENSG00000168137 E098 5.5056487 0.0757529593 5.895018e-01 7.633842e-01 3 9475050 9475067 18 + 0.834 0.776 -0.226
ENSG00000168137 E099 242.4178643 0.0004804188 1.016236e-05 2.125634e-04 3 9475068 9475156 89 + 2.302 2.447 0.486
ENSG00000168137 E100 41.6952542 0.0305684139 6.645276e-01 8.127332e-01 3 9475157 9475482 326 + 1.580 1.666 0.291
ENSG00000168137 E101 2600.4706818 0.0018034710 2.177904e-19 5.806251e-17 3 9475483 9478154 2672 + 3.300 3.493 0.641
ENSG00000168137 E102 1.8729880 0.0342241401 4.580652e-01 6.717884e-01 3 9478601 9479240 640 + 0.376 0.533 0.810