ENSG00000168014

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000334126 ENSG00000168014 HEK293_OSMI2_6hA HEK293_TMG_6hB C2CD3 protein_coding protein_coding 10.43023 14.18004 8.818746 1.739681 0.6589354 -0.6845984 1.9762469 2.43268236 1.6316068 0.75515096 0.8246880 -0.57335764 0.20189583 0.166166667 0.19746667 0.03130000 9.865178e-01 1.371561e-24 FALSE TRUE
ENST00000538625 ENSG00000168014 HEK293_OSMI2_6hA HEK293_TMG_6hB C2CD3 protein_coding processed_transcript 10.43023 14.18004 8.818746 1.739681 0.6589354 -0.6845984 1.9707189 4.02739446 0.0000000 0.34483053 0.0000000 -8.65728074 0.15953333 0.287400000 0.00000000 -0.28740000 1.371561e-24 1.371561e-24 FALSE TRUE
ENST00000539061 ENSG00000168014 HEK293_OSMI2_6hA HEK293_TMG_6hB C2CD3 protein_coding protein_coding 10.43023 14.18004 8.818746 1.739681 0.6589354 -0.6845984 2.2665894 3.01396625 1.9271215 0.43849885 0.5350378 -0.64252758 0.21917500 0.211266667 0.21206667 0.00080000 1.000000e+00 1.371561e-24 FALSE TRUE
ENST00000681291 ENSG00000168014 HEK293_OSMI2_6hA HEK293_TMG_6hB C2CD3 protein_coding nonsense_mediated_decay 10.43023 14.18004 8.818746 1.739681 0.6589354 -0.6845984 1.5360259 2.24967045 2.2001626 0.45072737 0.6031573 -0.03195986 0.15610000 0.157200000 0.24186667 0.08466667 6.516611e-01 1.371561e-24 FALSE TRUE
MSTRG.5977.15 ENSG00000168014 HEK293_OSMI2_6hA HEK293_TMG_6hB C2CD3 protein_coding   10.43023 14.18004 8.818746 1.739681 0.6589354 -0.6845984 0.1694259 0.07746152 0.5680482 0.07746152 0.1620829 2.72446958 0.01748333 0.004933333 0.06336667 0.05843333 6.530565e-02 1.371561e-24 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000168014 E001 3.0352632 0.0135393202 1.608289e-01 3.780060e-01 11 74012718 74012731 14 - 0.417 0.665 1.169
ENSG00000168014 E002 3.4811404 0.0156171251 1.777087e-01 4.007271e-01 11 74012732 74012734 3 - 0.479 0.711 1.040
ENSG00000168014 E003 3.9456109 0.0074903017 7.590333e-02 2.365683e-01 11 74012735 74012736 2 - 0.479 0.771 1.284
ENSG00000168014 E004 3.9456109 0.0074903017 7.590333e-02 2.365683e-01 11 74012737 74012737 1 - 0.479 0.771 1.284
ENSG00000168014 E005 4.2073472 0.0066042760 4.253329e-02 1.613314e-01 11 74012738 74012744 7 - 0.479 0.807 1.426
ENSG00000168014 E006 4.7438715 0.0057859536 4.902107e-02 1.772690e-01 11 74012745 74012749 5 - 0.534 0.841 1.295
ENSG00000168014 E007 14.7673016 0.0026067690 1.240522e-02 6.806538e-02 11 74012750 74012773 24 - 1.012 1.268 0.920
ENSG00000168014 E008 14.1069237 0.0024526759 7.445290e-03 4.677605e-02 11 74012774 74012774 1 - 0.976 1.256 1.007
ENSG00000168014 E009 127.1159002 0.0054843878 3.737154e-06 8.950145e-05 11 74012775 74013270 496 - 1.933 2.173 0.806
ENSG00000168014 E010 80.5583118 0.0007192117 8.641396e-08 3.258232e-06 11 74013271 74013443 173 - 1.728 1.979 0.847
ENSG00000168014 E011 64.3729251 0.0006458078 2.331484e-04 3.036580e-03 11 74013444 74013525 82 - 1.672 1.865 0.651
ENSG00000168014 E012 5.8896025 0.2069785379 4.169182e-01 6.413321e-01 11 74016599 74016801 203 - 0.714 0.877 0.645
ENSG00000168014 E013 73.0702460 0.0043974275 3.099104e-04 3.830695e-03 11 74028287 74028393 107 - 1.708 1.923 0.724
ENSG00000168014 E014 35.5644982 0.0011734801 2.897813e-03 2.278553e-02 11 74028394 74028398 5 - 1.408 1.616 0.711
ENSG00000168014 E015 0.8624920 0.2935169786 4.646432e-01   11 74029752 74030248 497 - 0.146 0.315 1.416
ENSG00000168014 E016 1.2266419 0.1404292521 6.178148e-01   11 74033313 74033350 38 - 0.256 0.366 0.721
ENSG00000168014 E017 255.5636842 0.0061423435 6.994987e-04 7.440712e-03 11 74033351 74034278 928 - 2.293 2.451 0.525
ENSG00000168014 E018 0.0000000       11 74034432 74034433 2 -      
ENSG00000168014 E019 0.0000000       11 74034434 74034441 8 -      
ENSG00000168014 E020 0.0000000       11 74034442 74034567 126 -      
ENSG00000168014 E021 0.1308682 0.0307560697 7.495920e-01   11 74034568 74034608 41 - 0.000 0.099 11.242
ENSG00000168014 E022 0.1779838 0.0360552423 3.062876e-01   11 74036128 74036484 357 - 0.147 0.000 -12.643
ENSG00000168014 E023 73.1253269 0.0006496724 4.020643e-03 2.928326e-02 11 74037478 74037623 146 - 1.766 1.910 0.485
ENSG00000168014 E024 39.6910128 0.0068823385 8.021487e-02 2.452395e-01 11 74037624 74037652 29 - 1.501 1.639 0.472
ENSG00000168014 E025 38.8307791 0.0128033280 4.993094e-02 1.795271e-01 11 74037653 74037698 46 - 1.468 1.641 0.592
ENSG00000168014 E026 0.3228314 0.4124978143 1.783713e-01   11 74038975 74042053 3079 - 0.258 0.000 -13.464
ENSG00000168014 E027 72.7702317 0.0034864238 3.583300e-01 5.944909e-01 11 74042054 74042218 165 - 1.817 1.881 0.217
ENSG00000168014 E028 0.0000000       11 74046670 74048204 1535 -      
ENSG00000168014 E029 59.0092622 0.0030405461 6.078483e-01 7.754315e-01 11 74048205 74048338 134 - 1.744 1.789 0.155
ENSG00000168014 E030 67.2635767 0.0006536353 5.149630e-02 1.832929e-01 11 74049337 74049542 206 - 1.754 1.860 0.359
ENSG00000168014 E031 1.8374512 0.0130585799 3.516257e-01 5.887399e-01 11 74049543 74054023 4481 - 0.344 0.521 0.937
ENSG00000168014 E032 41.6427485 0.0027451069 1.466528e-01 3.574149e-01 11 74054607 74054671 65 - 1.548 1.656 0.368
ENSG00000168014 E033 0.1614157 0.0334879687 3.065421e-01   11 74056892 74057405 514 - 0.147 0.000 -12.643
ENSG00000168014 E034 50.8073117 0.0038639952 3.623845e-01 5.976500e-01 11 74057406 74057544 139 - 1.657 1.732 0.254
ENSG00000168014 E035 0.9986097 0.1301868697 2.096023e-01   11 74069648 74069912 265 - 0.421 0.180 -1.672
ENSG00000168014 E036 0.0000000       11 74070506 74070874 369 -      
ENSG00000168014 E037 68.8881291 0.0048070934 3.279458e-01 5.669778e-01 11 74074253 74074505 253 - 1.786 1.860 0.251
ENSG00000168014 E038 42.6054760 0.0051039217 3.939455e-01 6.234776e-01 11 74074506 74074600 95 - 1.577 1.652 0.255
ENSG00000168014 E039 128.1202729 0.0023779742 6.985033e-01 8.346368e-01 11 74078115 74078717 603 - 2.092 2.097 0.016
ENSG00000168014 E040 33.8575772 0.0020363683 2.530231e-03 2.052984e-02 11 74084881 74084970 90 - 1.629 1.460 -0.577
ENSG00000168014 E041 0.4646582 0.0212729375 8.808418e-01   11 74085522 74085617 96 - 0.147 0.181 0.353
ENSG00000168014 E042 64.8742787 0.0081184370 3.313865e-02 1.364360e-01 11 74085618 74085886 269 - 1.872 1.761 -0.374
ENSG00000168014 E043 39.9823129 0.0011966514 4.413378e-03 3.145084e-02 11 74090813 74090936 124 - 1.679 1.535 -0.490
ENSG00000168014 E044 0.0000000       11 74091298 74091364 67 -      
ENSG00000168014 E045 50.3333120 0.0007332706 6.808973e-03 4.373229e-02 11 74092416 74092588 173 - 1.769 1.652 -0.396
ENSG00000168014 E046 0.2027342 0.0339236822 7.479846e-01   11 74093547 74093815 269 - 0.000 0.100 11.245
ENSG00000168014 E047 43.1679024 0.0077314031 3.581406e-01 5.943228e-01 11 74093816 74093999 184 - 1.663 1.620 -0.146
ENSG00000168014 E048 39.1070774 0.0063049895 1.389912e-01 3.459679e-01 11 74095228 74095408 181 - 1.644 1.562 -0.277
ENSG00000168014 E049 45.5073809 0.0008054839 7.699328e-01 8.785835e-01 11 74098009 74098255 247 - 1.633 1.667 0.114
ENSG00000168014 E050 23.5793553 0.0016282651 2.664526e-01 5.059517e-01 11 74100525 74100608 84 - 1.422 1.360 -0.215
ENSG00000168014 E051 21.4941926 0.0017224070 3.464326e-01 5.840122e-01 11 74100609 74100676 68 - 1.373 1.319 -0.187
ENSG00000168014 E052 84.0780536 0.0060775570 1.261823e-02 6.892015e-02 11 74103131 74103625 495 - 1.986 1.870 -0.390
ENSG00000168014 E053 28.7830718 0.0016716375 4.441436e-02 1.661361e-01 11 74106371 74106489 119 - 1.533 1.419 -0.391
ENSG00000168014 E054 14.1557605 0.0235602040 8.988121e-02 2.635433e-01 11 74106490 74106493 4 - 1.273 1.110 -0.578
ENSG00000168014 E055 0.4880035 0.1729747914 3.828866e-01   11 74107409 74107875 467 - 0.255 0.101 -1.611
ENSG00000168014 E056 0.7615063 0.2028107444 4.511608e-01   11 74107876 74108143 268 - 0.340 0.181 -1.203
ENSG00000168014 E057 30.3934297 0.0013534355 2.746218e-02 1.196836e-01 11 74109034 74109152 119 - 1.553 1.428 -0.427
ENSG00000168014 E058 0.3393995 0.0246825925 9.911754e-02   11 74109153 74109492 340 - 0.257 0.000 -13.641
ENSG00000168014 E059 0.1779838 0.0360552423 3.062876e-01   11 74110523 74110588 66 - 0.147 0.000 -12.643
ENSG00000168014 E060 0.3150090 0.0312796759 7.260220e-01   11 74113201 74113779 579 - 0.147 0.100 -0.642
ENSG00000168014 E061 32.3587235 0.0056777001 1.233487e-01 3.210730e-01 11 74113780 74113892 113 - 1.563 1.469 -0.320
ENSG00000168014 E062 45.5224255 0.0009495334 6.544598e-02 2.149048e-01 11 74114384 74114593 210 - 1.701 1.621 -0.273
ENSG00000168014 E063 35.1959660 0.0010545369 4.746899e-04 5.446842e-03 11 74118228 74118382 155 - 1.653 1.464 -0.646
ENSG00000168014 E064 34.4152826 0.0024530528 1.341163e-04 1.909940e-03 11 74122988 74123135 148 - 1.661 1.440 -0.755
ENSG00000168014 E065 2.7471315 0.0148189330 7.905245e-01 8.908082e-01 11 74128054 74128577 524 - 0.583 0.554 -0.133
ENSG00000168014 E066 30.8150759 0.3752805688 1.867602e-01 4.127447e-01 11 74128578 74129173 596 - 1.275 1.588 1.079
ENSG00000168014 E067 46.7101585 0.4931754531 1.791984e-01 4.028798e-01 11 74129174 74129792 619 - 1.426 1.770 1.174
ENSG00000168014 E068 3.5672410 0.1866815658 3.817534e-01 6.137334e-01 11 74129793 74129842 50 - 0.534 0.721 0.816
ENSG00000168014 E069 3.8701760 0.0071319568 3.733377e-01 6.067635e-01 11 74129843 74129972 130 - 0.583 0.731 0.635
ENSG00000168014 E070 12.6939198 0.0915025925 3.115034e-01 5.518798e-01 11 74131868 74132843 976 - 1.210 1.046 -0.589
ENSG00000168014 E071 66.8389069 0.0006705148 7.483760e-05 1.173947e-03 11 74132844 74132972 129 - 1.908 1.754 -0.520
ENSG00000168014 E072 72.6948415 0.0020853591 4.461807e-07 1.400587e-05 11 74133425 74133557 133 - 1.976 1.766 -0.705
ENSG00000168014 E073 0.1779838 0.0360552423 3.062876e-01   11 74133558 74133630 73 - 0.147 0.000 -12.643
ENSG00000168014 E074 1.9304652 0.3214541315 2.185875e-01 4.517410e-01 11 74137058 74138719 1662 - 0.627 0.308 -1.645
ENSG00000168014 E075 89.1975384 0.0010641383 7.387878e-06 1.613052e-04 11 74138720 74138967 248 - 2.035 1.878 -0.528
ENSG00000168014 E076 79.4123012 0.0004750306 5.048298e-05 8.387801e-04 11 74139605 74139817 213 - 1.976 1.833 -0.481
ENSG00000168014 E077 28.8019569 0.0012596712 2.291409e-02 1.056482e-01 11 74139818 74139828 11 - 1.538 1.407 -0.450
ENSG00000168014 E078 2.2621486 0.0096176603 3.674652e-01 6.019691e-01 11 74158327 74158694 368 - 0.583 0.448 -0.648
ENSG00000168014 E079 31.6087212 0.0012749269 2.118347e-03 1.786394e-02 11 74161399 74161433 35 - 1.599 1.424 -0.601
ENSG00000168014 E080 39.9748655 0.0008571710 1.805444e-02 8.921780e-02 11 74161434 74161556 123 - 1.668 1.554 -0.389
ENSG00000168014 E081 0.1308682 0.0307560697 7.495920e-01   11 74164810 74164876 67 - 0.000 0.099 11.242
ENSG00000168014 E082 0.1723744 0.0415433885 7.475090e-01   11 74168014 74168232 219 - 0.000 0.100 11.237
ENSG00000168014 E083 0.0000000       11 74168233 74168343 111 -      
ENSG00000168014 E084 69.3190366 0.0007549526 7.045300e-04 7.482046e-03 11 74168344 74168613 270 - 1.912 1.784 -0.432
ENSG00000168014 E085 38.0817426 0.0035852638 3.284086e-02 1.356043e-01 11 74170738 74171029 292 - 1.649 1.537 -0.384
ENSG00000168014 E086 1.5594070 0.0121654384 1.654579e-01 3.845115e-01 11 74171030 74171210 181 - 0.534 0.308 -1.233