• ENSG00000166123
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000166123

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000340124 ENSG00000166123 HEK293_OSMI2_6hA HEK293_TMG_6hB GPT2 protein_coding protein_coding 34.18545 49.13855 21.43542 8.721936 1.48063 -1.196479 17.601848 26.541177 5.7189683 5.8568800 0.7140927 -2.2124286 0.49492500 0.5293667 0.27186667 -0.257500000 0.0243307355 0.0008807606 FALSE TRUE
ENST00000562132 ENSG00000166123 HEK293_OSMI2_6hA HEK293_TMG_6hB GPT2 protein_coding protein_coding 34.18545 49.13855 21.43542 8.721936 1.48063 -1.196479 5.100319 6.360584 5.0577149 1.0112032 0.6947583 -0.3300903 0.16368333 0.1343667 0.23360000 0.099233333 0.1700628254 0.0008807606 FALSE FALSE
MSTRG.12563.1 ENSG00000166123 HEK293_OSMI2_6hA HEK293_TMG_6hB GPT2 protein_coding   34.18545 49.13855 21.43542 8.721936 1.48063 -1.196479 8.264278 11.859022 8.9204967 2.3813611 0.9626901 -0.4103887 0.24074167 0.2399000 0.41426667 0.174366667 0.0008807606 0.0008807606 FALSE TRUE
MSTRG.12563.6 ENSG00000166123 HEK293_OSMI2_6hA HEK293_TMG_6hB GPT2 protein_coding   34.18545 49.13855 21.43542 8.721936 1.48063 -1.196479 2.021426 2.460715 0.9907044 0.5288208 0.9907044 -1.3039129 0.06184583 0.0520000 0.04436667 -0.007633333 0.4646238813 0.0008807606 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_6hBColumn filter
HEK293_OSMI2_6hAColumn filter
log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hBColumn filter
ENSG00000166123 E001 0.5059767 0.0217769541 4.571286e-01   16 46884308 46884334 27 + 0.001 0.189 8.392
ENSG00000166123 E002 34.9442649 0.0010621099 3.198053e-03 0.024595943 16 46884362 46884467 106 + 1.311 1.534 0.772
ENSG00000166123 E003 0.3337900 0.0360083340 4.076950e-01   16 46884468 46884517 50 + 0.197 0.073 -1.654
ENSG00000166123 E004 29.3469051 0.0016681350 4.597668e-03 0.032463337 16 46884694 46884694 1 + 1.231 1.467 0.820
ENSG00000166123 E005 31.9847442 0.0013856716 3.244460e-04 0.003977649 16 46884695 46884724 30 + 1.216 1.510 1.022
ENSG00000166123 E006 63.7322721 0.0009669019 9.778418e-05 0.001467739 16 46884725 46884834 110 + 1.562 1.789 0.768
ENSG00000166123 E007 108.3650371 0.0004510169 3.096571e-01 0.550124671 16 46884835 46884958 124 + 1.939 1.982 0.145
ENSG00000166123 E008 1.6502418 0.0160977146 2.789947e-03 0.022124545 16 46884959 46885331 373 + 0.700 0.189 -2.878
ENSG00000166123 E009 0.8148287 0.0170677709 8.438849e-01   16 46885467 46885469 3 + 0.197 0.237 0.343
ENSG00000166123 E010 2.1597350 0.0345760964 1.335011e-01 0.337289056 16 46885470 46885577 108 + 0.648 0.387 -1.259
ENSG00000166123 E011 0.3641499 0.0294833284 4.038873e-01   16 46885578 46885612 35 + 0.197 0.073 -1.652
ENSG00000166123 E012 171.2399141 0.0004791192 2.458074e-02 0.110926228 16 46897648 46897737 90 + 2.221 2.153 -0.230
ENSG00000166123 E013 215.7774109 0.0009025178 3.926125e-03 0.028734108 16 46900682 46900790 109 + 2.331 2.248 -0.279
ENSG00000166123 E014 285.6186632 0.0002388693 3.222235e-04 0.003956400 16 46906842 46906975 134 + 2.453 2.369 -0.280
ENSG00000166123 E015 428.2496673 0.0002614378 1.703902e-02 0.085610003 16 46909684 46909927 244 + 2.599 2.552 -0.157
ENSG00000166123 E016 26.4093678 0.0401585847 2.960088e-01 0.536512700 16 46915298 46916627 1330 + 1.273 1.395 0.422
ENSG00000166123 E017 251.2595350 0.0002252946 2.933342e-01 0.534055580 16 46916628 46916707 80 + 2.354 2.328 -0.086
ENSG00000166123 E018 349.3279874 0.0002265837 7.849898e-01 0.887551359 16 46918621 46918757 137 + 2.479 2.475 -0.015
ENSG00000166123 E019 398.4113039 0.0001754637 3.304881e-01 0.569433236 16 46922242 46922416 175 + 2.516 2.538 0.072
ENSG00000166123 E020 9.8118810 0.1324874433 6.416241e-01 0.797897877 16 46923833 46924388 556 + 1.035 0.947 -0.324
ENSG00000166123 E021 385.8246886 0.0008112430 1.716264e-02 0.086042640 16 46924389 46924544 156 + 2.472 2.533 0.204
ENSG00000166123 E022 326.7949019 0.0013394844 1.184043e-02 0.065791254 16 46926925 46927037 113 + 2.387 2.462 0.250
ENSG00000166123 E023 1772.0169317 0.0009062005 9.723398e-01 0.988149231 16 46928907 46931289 2383 + 3.179 3.178 -0.003