• ENSG00000164024
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000164024

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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TableFilter v0.7.3

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000296411 ENSG00000164024 HEK293_OSMI2_6hA HEK293_TMG_6hB METAP1 protein_coding protein_coding 36.43808 15.83778 60.40943 4.951796 2.272969 1.930732 29.110544 13.68361221 49.689103 4.63203111 1.9046357 1.859717 0.7941042 0.836266667 0.82250000 -0.013766667 9.193394e-01 4.319323e-05 FALSE TRUE
ENST00000513097 ENSG00000164024 HEK293_OSMI2_6hA HEK293_TMG_6hB METAP1 protein_coding retained_intron 36.43808 15.83778 60.40943 4.951796 2.272969 1.930732 1.657974 0.06818652 3.620448 0.03419662 0.4220216 5.537084 0.0356250 0.007066667 0.05963333 0.052566667 4.319323e-05 4.319323e-05 FALSE FALSE
ENST00000514051 ENSG00000164024 HEK293_OSMI2_6hA HEK293_TMG_6hB METAP1 protein_coding protein_coding 36.43808 15.83778 60.40943 4.951796 2.272969 1.930732 1.145969 0.18966234 0.000000 0.18966234 0.0000000 -4.319490 0.0509500 0.008766667 0.00000000 -0.008766667 6.015689e-01 4.319323e-05 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_6hBColumn filter
HEK293_OSMI2_6hAColumn filter
log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hBColumn filter
ENSG00000164024 E001 0.6376527 0.0193808442 2.668915e-01   4 98995631 98995632 2 + 0.133 0.334 1.688
ENSG00000164024 E002 0.9582712 0.0153923958 6.168397e-01   4 98995633 98995658 26 + 0.235 0.334 0.688
ENSG00000164024 E003 15.2533449 0.0399786517 1.693482e-01 3.897018e-01 4 98995659 98995720 62 + 1.106 1.264 0.561
ENSG00000164024 E004 44.1698188 0.0167132347 8.109413e-02 2.470073e-01 4 98995721 98995739 19 + 1.552 1.689 0.467
ENSG00000164024 E005 59.0057926 0.0125855984 4.896848e-02 1.771679e-01 4 98995740 98995753 14 + 1.675 1.812 0.464
ENSG00000164024 E006 67.3565055 0.0036417506 4.465558e-02 1.667556e-01 4 98995754 98995765 12 + 1.739 1.854 0.388
ENSG00000164024 E007 124.2419318 0.0004053786 3.509427e-01 5.881101e-01 4 98995766 98995829 64 + 2.021 2.065 0.148
ENSG00000164024 E008 124.0008293 0.0003339869 4.337866e-01 6.540641e-01 4 98995830 98995867 38 + 2.035 2.017 -0.062
ENSG00000164024 E009 5.9808290 0.0114334365 5.403107e-01 7.292288e-01 4 99005769 99005866 98 + 0.794 0.705 -0.361
ENSG00000164024 E010 0.0000000       4 99005867 99005870 4 +      
ENSG00000164024 E011 0.1723744 0.2826143092 1.507681e-01   4 99022295 99022424 130 + 0.000 0.200 10.316
ENSG00000164024 E012 0.6246688 0.0192282294 3.346940e-01   4 99022772 99023259 488 + 0.235 0.000 -12.251
ENSG00000164024 E013 156.1078413 0.0005491097 2.042374e-01 4.349644e-01 4 99028867 99028918 52 + 2.140 2.106 -0.115
ENSG00000164024 E014 0.6129023 0.0188946260 1.000000e+00   4 99031508 99031662 155 + 0.187 0.198 0.100
ENSG00000164024 E015 103.6733474 0.0005987230 7.238557e-03 4.576936e-02 4 99034230 99034232 3 + 1.979 1.875 -0.350
ENSG00000164024 E016 233.3995112 0.0007637590 6.611223e-03 4.275630e-02 4 99034233 99034342 110 + 2.321 2.248 -0.243
ENSG00000164024 E017 164.3246424 0.0012124969 1.812748e-02 8.944113e-02 4 99035400 99035460 61 + 2.173 2.095 -0.260
ENSG00000164024 E018 7.4846478 0.0156275797 7.596151e-02 2.366937e-01 4 99035954 99036011 58 + 0.923 0.650 -1.090
ENSG00000164024 E019 19.6289462 0.0024621281 9.997230e-03 5.815224e-02 4 99036043 99036089 47 + 1.302 1.057 -0.873
ENSG00000164024 E020 7.4781318 0.0324977920 1.219763e-01 3.190155e-01 4 99037767 99037934 168 + 0.921 0.652 -1.070
ENSG00000164024 E021 2.9327158 0.0082642869 4.494162e-01 6.652807e-01 4 99037935 99037941 7 + 0.568 0.437 -0.635
ENSG00000164024 E022 10.1654412 0.0032873929 3.890186e-05 6.726840e-04 4 99039203 99039373 171 + 1.072 0.437 -2.635
ENSG00000164024 E023 104.0432297 0.0019610725 2.045462e-01 4.353082e-01 4 99039374 99039393 20 + 1.970 1.919 -0.171
ENSG00000164024 E024 173.0474818 0.0003345373 2.658048e-01 5.052366e-01 4 99039394 99039465 72 + 2.183 2.158 -0.083
ENSG00000164024 E025 196.7232315 0.0007717230 8.844864e-01 9.436763e-01 4 99041043 99041126 84 + 2.231 2.238 0.025
ENSG00000164024 E026 289.5676564 0.0002059088 8.833115e-03 5.307450e-02 4 99043249 99043387 139 + 2.410 2.357 -0.177
ENSG00000164024 E027 173.2698804 0.0003320909 5.405280e-05 8.904266e-04 4 99045179 99045189 11 + 2.202 2.080 -0.409
ENSG00000164024 E028 319.6601215 0.0002439759 3.833213e-02 1.504698e-01 4 99045190 99045310 121 + 2.450 2.413 -0.123
ENSG00000164024 E029 309.2103897 0.0002781173 5.596934e-01 7.430449e-01 4 99048733 99048876 144 + 2.427 2.425 -0.008
ENSG00000164024 E030 214.1244059 0.0027375244 7.935332e-01 8.923890e-01 4 99057753 99057818 66 + 2.263 2.283 0.066
ENSG00000164024 E031 336.1101153 0.0006317333 3.359868e-01 5.744316e-01 4 99061154 99061429 276 + 2.453 2.486 0.110
ENSG00000164024 E032 1054.2910563 0.0005843261 6.719706e-10 4.045234e-08 4 99061430 99062809 1380 + 2.932 3.030 0.325