ENSG00000160796

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000443829 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding protein_coding 32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 2.5673916 4.5036581 0.000000 0.7574773 0.0000000 -8.8181533 0.08196667 0.129700000 0.00000000 -0.12970000 8.682075e-08 2.258618e-15 FALSE TRUE
ENST00000477412 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding retained_intron 32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 5.0705790 7.0647946 3.339309 1.4517743 0.2445895 -1.0788250 0.15516250 0.172666667 0.12836667 -0.04430000 4.711594e-01 2.258618e-15 FALSE FALSE
ENST00000486870 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding retained_intron 32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 3.1522094 4.5951901 3.303926 1.7850404 0.1290449 -0.4747191 0.09461667 0.101766667 0.12800000 0.02623333 6.900929e-01 2.258618e-15 FALSE FALSE
ENST00000651350 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding retained_intron 32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 3.9616975 3.8718226 4.558161 1.6321564 0.1303142 0.2348793 0.12318333 0.084333333 0.17630000 0.09196667 9.338597e-03 2.258618e-15 FALSE FALSE
ENST00000651450 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding retained_intron 32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 3.6619667 4.9435496 3.154092 2.5883216 0.3119182 -0.6466709 0.10822500 0.100466667 0.12330000 0.02283333 8.600410e-01 2.258618e-15 FALSE FALSE
MSTRG.22869.12 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding   32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 0.7354728 0.3796639 1.748891 0.3796639 0.4229438 2.1743640 0.02456667 0.005533333 0.06950000 0.06396667 1.127390e-01 2.258618e-15 FALSE TRUE
MSTRG.22869.15 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding   32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 1.1174218 2.4699270 0.000000 0.5490053 0.0000000 -7.9541539 0.03097500 0.060233333 0.00000000 -0.06023333 2.258618e-15 2.258618e-15 FALSE TRUE
MSTRG.22869.9 ENSG00000160796 HEK293_OSMI2_6hA HEK293_TMG_6hB NBEAL2 protein_coding   32.50057 43.24885 25.9738 13.05874 1.453951 -0.7353831 1.7668096 3.4324253 1.016353 0.4278238 0.5097824 -1.7458977 0.05360417 0.088433333 0.03776667 -0.05066667 7.193254e-01 2.258618e-15 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000160796 E001 0.1308682 0.0319985105 1.000000e+00   3 46979615 46979619 5 + 0.000 0.080 8.989
ENSG00000160796 E002 0.4341107 0.0244411696 3.430944e-01   3 46979620 46979658 39 + 0.000 0.207 12.857
ENSG00000160796 E003 0.5649788 0.0650681109 2.283982e-01   3 46979659 46979665 7 + 0.000 0.257 13.208
ENSG00000160796 E004 2.7470588 0.0086843213 9.443525e-01 9.745195e-01 3 46979666 46979682 17 + 0.551 0.537 -0.065
ENSG00000160796 E005 5.4311037 0.0056368625 2.923648e-01 5.330771e-01 3 46979683 46979706 24 + 0.661 0.812 0.617
ENSG00000160796 E006 6.5443733 0.0048306305 3.399323e-01 5.778958e-01 3 46979707 46979740 34 + 0.748 0.876 0.500
ENSG00000160796 E007 7.0918562 0.0042478260 2.228066e-01 4.567940e-01 3 46979741 46979750 10 + 0.748 0.910 0.630
ENSG00000160796 E008 8.0319436 0.0040562566 8.787133e-02 2.597750e-01 3 46979751 46979761 11 + 0.748 0.970 0.858
ENSG00000160796 E009 16.8752721 0.0090951243 1.002170e-01 2.821898e-01 3 46979762 46979847 86 + 1.088 1.248 0.568
ENSG00000160796 E010 12.5747462 0.0216468722 1.389694e-01 3.459425e-01 3 46979848 46979855 8 + 0.963 1.133 0.621
ENSG00000160796 E011 19.4534571 0.0121001739 7.046560e-02 2.256502e-01 3 46979856 46979912 57 + 1.139 1.312 0.611
ENSG00000160796 E012 0.1614157 0.0358194311 1.974776e-01   3 46987990 46988077 88 + 0.179 0.000 -14.010
ENSG00000160796 E013 32.1670269 0.0150092356 3.180921e-01 5.580154e-01 3 46988669 46988757 89 + 1.424 1.504 0.275
ENSG00000160796 E014 49.8602203 0.0044447808 6.641213e-01 8.124821e-01 3 46988842 46988970 129 + 1.691 1.655 -0.121
ENSG00000160796 E015 47.5573301 0.0015693127 5.142472e-03 3.536527e-02 3 46989085 46989166 82 + 1.754 1.594 -0.543
ENSG00000160796 E016 54.1662990 0.0026806621 1.115202e-02 6.301134e-02 3 46989260 46989381 122 + 1.799 1.651 -0.501
ENSG00000160796 E017 39.5858727 0.0014329345 3.826328e-03 2.817493e-02 3 46989511 46989593 83 + 1.682 1.504 -0.606
ENSG00000160796 E018 36.1470054 0.0010574329 5.085478e-05 8.442968e-04 3 46991219 46991304 86 + 1.686 1.439 -0.845
ENSG00000160796 E019 64.2181987 0.0013632910 9.485804e-06 2.002371e-04 3 46991406 46991688 283 + 1.910 1.696 -0.722
ENSG00000160796 E020 51.7268200 0.0138152789 2.387336e-03 1.960561e-02 3 46991840 46991946 107 + 1.817 1.605 -0.717
ENSG00000160796 E021 3.2063678 0.0070764414 2.863058e-01 5.269803e-01 3 46992475 46992555 81 + 0.707 0.537 -0.744
ENSG00000160796 E022 42.9160968 0.0131144305 1.396523e-03 1.287173e-02 3 46993937 46994020 84 + 1.755 1.515 -0.816
ENSG00000160796 E023 49.8086965 0.0044298699 1.536012e-03 1.385585e-02 3 46994455 46994553 99 + 1.788 1.602 -0.630
ENSG00000160796 E024 65.1007931 0.0122907472 4.581052e-04 5.296623e-03 3 46995032 46995320 289 + 1.935 1.699 -0.794
ENSG00000160796 E025 69.9111837 0.0006885358 3.527844e-04 4.267158e-03 3 46995321 46995633 313 + 1.921 1.758 -0.548
ENSG00000160796 E026 45.9235130 0.0008687079 1.249448e-02 6.841369e-02 3 46995714 46995846 133 + 1.725 1.585 -0.478
ENSG00000160796 E027 41.9071410 0.0143847408 9.862231e-02 2.793857e-01 3 46995932 46996051 120 + 1.688 1.549 -0.475
ENSG00000160796 E028 51.9767563 0.0282789693 2.060964e-01 4.371234e-01 3 46996271 46996392 122 + 1.751 1.652 -0.335
ENSG00000160796 E029 42.2886582 0.0388363500 6.245036e-01 7.870154e-01 3 46996393 46996478 86 + 1.605 1.590 -0.050
ENSG00000160796 E030 60.7744295 0.0552272730 2.354763e-01 4.713976e-01 3 46996479 46996592 114 + 1.827 1.708 -0.403
ENSG00000160796 E031 43.8841215 0.0074899569 6.107380e-04 6.675937e-03 3 46996751 46996828 78 + 1.760 1.524 -0.802
ENSG00000160796 E032 28.9112191 0.0016738850 1.946046e-06 5.096119e-05 3 46996829 46996833 5 + 1.633 1.309 -1.115
ENSG00000160796 E033 2.5092805 0.1752381190 3.265814e-01 5.657669e-01 3 46996834 46996953 120 + 0.613 0.456 -0.738
ENSG00000160796 E034 61.6622874 0.0018882693 4.995017e-06 1.150507e-04 3 46996954 46997046 93 + 1.905 1.674 -0.781
ENSG00000160796 E035 79.1680242 0.0026498879 4.108562e-04 4.834790e-03 3 46997259 46997433 175 + 1.974 1.805 -0.569
ENSG00000160796 E036 57.0423895 0.0007917675 1.075814e-02 6.135540e-02 3 46997561 46997694 134 + 1.812 1.683 -0.437
ENSG00000160796 E037 0.3150090 0.0250389459 5.053747e-01   3 46997695 46997696 2 + 0.179 0.081 -1.326
ENSG00000160796 E038 32.0397353 0.0013127361 3.970914e-01 6.260023e-01 3 46998067 46998111 45 + 1.514 1.455 -0.205
ENSG00000160796 E039 56.3069261 0.0029078079 5.669258e-02 1.952881e-01 3 46998112 46998226 115 + 1.788 1.677 -0.375
ENSG00000160796 E040 61.8724633 0.0022223650 1.210396e-02 6.687260e-02 3 46998463 46998565 103 + 1.845 1.714 -0.444
ENSG00000160796 E041 64.0383394 0.0006448130 3.631880e-01 5.982819e-01 3 46998717 46998879 163 + 1.802 1.756 -0.156
ENSG00000160796 E042 29.3224589 0.0012828373 3.151042e-01 5.551887e-01 3 46998959 46999012 54 + 1.389 1.461 0.245
ENSG00000160796 E043 38.8498469 0.0033511978 5.088542e-01 7.070370e-01 3 46999013 46999117 105 + 1.529 1.572 0.147
ENSG00000160796 E044 11.7468673 0.0333224105 6.736452e-01 8.187197e-01 3 46999270 46999314 45 + 1.008 1.077 0.253
ENSG00000160796 E045 56.6902415 0.0007115932 4.289173e-01 6.502645e-01 3 46999315 46999474 160 + 1.691 1.730 0.133
ENSG00000160796 E046 1.8689240 0.0305469384 8.727267e-02 2.587449e-01 3 46999590 46999629 40 + 0.611 0.305 -1.593
ENSG00000160796 E047 44.1251987 0.0010915419 1.605065e-01 3.775513e-01 3 46999630 46999715 86 + 1.667 1.585 -0.280
ENSG00000160796 E048 91.7117009 0.0005590794 5.555073e-01 7.401280e-01 3 46999889 47000195 307 + 1.942 1.916 -0.086
ENSG00000160796 E049 50.6918242 0.0008637070 7.479535e-01 8.654765e-01 3 47000196 47000246 51 + 1.663 1.677 0.050
ENSG00000160796 E050 86.1791288 0.0120577549 4.224123e-01 6.454215e-01 3 47000247 47000404 158 + 1.937 1.883 -0.182
ENSG00000160796 E051 5.3450493 0.2195949803 3.693660e-02 1.467531e-01 3 47000950 47001000 51 + 1.020 0.591 -1.710
ENSG00000160796 E052 93.5605264 0.0004537972 3.635202e-01 5.986161e-01 3 47001001 47001179 179 + 1.961 1.922 -0.132
ENSG00000160796 E053 5.9344685 0.1400124980 6.639200e-02 2.169374e-01 3 47001180 47001278 99 + 0.986 0.696 -1.134
ENSG00000160796 E054 90.6282501 0.0011759737 9.337561e-01 9.689662e-01 3 47001279 47001438 160 + 1.923 1.917 -0.022
ENSG00000160796 E055 83.1032009 0.0007762391 5.167375e-01 7.128669e-01 3 47001689 47001826 138 + 1.902 1.872 -0.100
ENSG00000160796 E056 71.8662921 0.0044301041 3.236871e-01 5.629954e-01 3 47001920 47002032 113 + 1.853 1.802 -0.172
ENSG00000160796 E057 79.5563269 0.0006416797 5.072214e-01 7.058330e-01 3 47002033 47002235 203 + 1.885 1.854 -0.103
ENSG00000160796 E058 56.2517244 0.0096403378 6.549893e-01 8.067148e-01 3 47002236 47002288 53 + 1.732 1.709 -0.080
ENSG00000160796 E059 73.8953130 0.0007044527 7.593618e-01 8.721568e-01 3 47002371 47002520 150 + 1.845 1.829 -0.054
ENSG00000160796 E060 3.9062038 0.0269845301 7.686853e-01 8.778306e-01 3 47002521 47002534 14 + 0.610 0.669 0.256
ENSG00000160796 E061 66.8634982 0.0133075113 3.761435e-01 6.091085e-01 3 47002645 47002802 158 + 1.741 1.803 0.211
ENSG00000160796 E062 82.1336207 0.0004792714 8.818546e-01 9.423349e-01 3 47002957 47003081 125 + 1.873 1.877 0.012
ENSG00000160796 E063 92.2350551 0.0005512417 6.044212e-01 7.731799e-01 3 47003174 47003309 136 + 1.913 1.931 0.060
ENSG00000160796 E064 84.4275292 0.0016394394 1.425540e-01 3.512616e-01 3 47003816 47003926 111 + 1.842 1.904 0.207
ENSG00000160796 E065 56.8889836 0.0056907741 1.688665e-01 3.890731e-01 3 47003927 47003976 50 + 1.663 1.737 0.251
ENSG00000160796 E066 72.8469999 0.0153311281 6.617534e-02 2.164681e-01 3 47004077 47004171 95 + 1.736 1.851 0.388
ENSG00000160796 E067 59.1739501 0.0042107914 4.741787e-02 1.735560e-01 3 47004172 47004210 39 + 1.653 1.762 0.368
ENSG00000160796 E068 90.2900624 0.0009737073 8.198224e-02 2.487177e-01 3 47004211 47004393 183 + 1.858 1.932 0.250
ENSG00000160796 E069 41.8518992 0.0710322627 6.451762e-01 8.003225e-01 3 47004394 47004494 101 + 1.574 1.592 0.060
ENSG00000160796 E070 79.8347330 0.0077888285 6.020051e-01 7.714807e-01 3 47004495 47004590 96 + 1.883 1.856 -0.093
ENSG00000160796 E071 24.8365143 0.1104368742 4.878767e-02 1.767707e-01 3 47004591 47004618 28 + 1.522 1.289 -0.808
ENSG00000160796 E072 89.2574393 0.0756913404 5.784015e-02 1.979635e-01 3 47004619 47004971 353 + 2.017 1.859 -0.533
ENSG00000160796 E073 108.1931782 0.0004696573 3.874171e-01 6.184351e-01 3 47004972 47005096 125 + 2.018 1.982 -0.122
ENSG00000160796 E074 3.5858979 0.0818866585 9.702731e-01 9.869881e-01 3 47005144 47005180 37 + 0.609 0.616 0.027
ENSG00000160796 E075 99.4095061 0.0005383173 1.269926e-01 3.269993e-01 3 47005181 47005280 100 + 1.913 1.971 0.194
ENSG00000160796 E076 69.0491236 0.0030732277 3.745028e-02 1.481600e-01 3 47005281 47005321 41 + 1.722 1.826 0.353
ENSG00000160796 E077 7.6194393 0.1374454424 2.944692e-02 1.257249e-01 3 47005322 47005488 167 + 1.111 0.762 -1.315
ENSG00000160796 E078 107.1463551 0.0029896530 1.847873e-02 9.063664e-02 3 47005489 47005619 131 + 1.914 2.014 0.337
ENSG00000160796 E079 1.0295171 0.0160928326 2.786241e-01   3 47005620 47005737 118 + 0.404 0.207 -1.326
ENSG00000160796 E080 75.1803120 0.0039075215 2.292991e-01 4.643264e-01 3 47005738 47005786 49 + 1.796 1.850 0.182
ENSG00000160796 E081 86.6250412 0.0026751674 2.984332e-01 5.388882e-01 3 47005787 47005847 61 + 1.864 1.906 0.141
ENSG00000160796 E082 4.1853838 0.1614360776 1.666538e-01 3.860912e-01 3 47005848 47005945 98 + 0.823 0.594 -0.949
ENSG00000160796 E083 119.6836404 0.0006954044 4.242170e-01 6.467284e-01 3 47005946 47006063 118 + 2.016 2.041 0.084
ENSG00000160796 E084 15.4319873 0.1027060078 5.324847e-02 1.873421e-01 3 47006064 47006164 101 + 1.338 1.080 -0.914
ENSG00000160796 E085 124.4768919 0.0010268706 3.575139e-01 5.937064e-01 3 47006165 47006262 98 + 2.033 2.062 0.098
ENSG00000160796 E086 20.3096504 0.0020341501 4.650146e-03 3.273545e-02 3 47006263 47006332 70 + 1.433 1.206 -0.792
ENSG00000160796 E087 136.2660351 0.0003803057 2.126412e-01 4.448363e-01 3 47006333 47006449 117 + 2.063 2.102 0.131
ENSG00000160796 E088 117.0468358 0.0485560799 2.235453e-04 2.931743e-03 3 47006450 47007050 601 + 2.243 1.899 -1.151
ENSG00000160796 E089 16.2984978 0.0847122085 2.648831e-02 1.167304e-01 3 47007051 47007065 15 + 1.372 1.098 -0.969
ENSG00000160796 E090 84.8679056 0.0006181171 5.882731e-03 3.916355e-02 3 47007066 47007116 51 + 1.799 1.919 0.406
ENSG00000160796 E091 80.4100738 0.0060018358 9.717931e-02 2.768172e-01 3 47007117 47007155 39 + 1.801 1.888 0.296
ENSG00000160796 E092 27.1167518 0.0693045597 6.489889e-02 2.136785e-01 3 47007156 47007240 85 + 1.530 1.343 -0.646
ENSG00000160796 E093 111.3149895 0.0004661631 3.093527e-04 3.825555e-03 3 47007241 47007322 82 + 1.902 2.040 0.465
ENSG00000160796 E094 97.9782402 0.0005163023 7.985034e-04 8.271408e-03 3 47007323 47007350 28 + 1.845 1.983 0.462
ENSG00000160796 E095 53.3520761 0.0357811469 1.901481e-01 4.171331e-01 3 47007351 47007524 174 + 1.754 1.660 -0.320
ENSG00000160796 E096 181.0246620 0.0049442709 2.302139e-05 4.310431e-04 3 47007525 47007697 173 + 2.079 2.257 0.596
ENSG00000160796 E097 10.8080305 0.0681087827 4.800821e-01 6.871367e-01 3 47007698 47007762 65 + 1.070 1.016 -0.199
ENSG00000160796 E098 8.6937077 0.0112075606 1.961769e-01 4.247674e-01 3 47007763 47007815 53 + 1.050 0.899 -0.563
ENSG00000160796 E099 146.0241582 0.0083525921 3.701497e-04 4.439260e-03 3 47007816 47007910 95 + 1.983 2.164 0.607
ENSG00000160796 E100 30.9780138 0.0015208309 7.024209e-01 8.370916e-01 3 47007911 47008069 159 + 1.479 1.452 -0.095
ENSG00000160796 E101 167.5093723 0.0003294891 1.849397e-06 4.865534e-05 3 47008070 47008186 117 + 2.069 2.220 0.505
ENSG00000160796 E102 12.1461965 0.0043713004 7.392430e-01 8.599074e-01 3 47008187 47008282 96 + 1.050 1.087 0.132
ENSG00000160796 E103 202.6544553 0.0019553986 4.307044e-06 1.011667e-04 3 47008283 47008441 159 + 2.147 2.304 0.524
ENSG00000160796 E104 6.2444566 0.0162136953 7.153485e-01 8.451377e-01 3 47008442 47008519 78 + 0.854 0.799 -0.215
ENSG00000160796 E105 164.8273850 0.0103551724 1.350323e-03 1.253678e-02 3 47008520 47008668 149 + 2.047 2.215 0.562
ENSG00000160796 E106 3.5519244 0.0065551975 1.014863e-01 2.844856e-01 3 47008669 47008988 320 + 0.786 0.537 -1.065
ENSG00000160796 E107 135.9790472 0.0063672628 7.118368e-07 2.114135e-05 3 47008989 47009124 136 + 1.897 2.151 0.852
ENSG00000160796 E108 0.8682213 0.0457670736 9.971496e-02   3 47009125 47009218 94 + 0.000 0.344 13.806
ENSG00000160796 E109 134.9695263 0.0146944499 2.168321e-07 7.413545e-06 3 47009219 47009704 486 + 1.813 2.162 1.171