ENSG00000157106

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000446231 ENSG00000157106 HEK293_OSMI2_6hA HEK293_TMG_6hB SMG1 protein_coding protein_coding 9.558326 7.077222 14.99577 0.8629106 1.026497 1.082225 7.6928519 6.144662 11.9570766 1.1382 0.6228169 0.9593193 0.80950000 0.8530333 0.80013333 -0.05290000 0.781494046 0.003449197 FALSE  
MSTRG.12195.6 ENSG00000157106 HEK293_OSMI2_6hA HEK293_TMG_6hB SMG1 protein_coding   9.558326 7.077222 14.99577 0.8629106 1.026497 1.082225 0.3853167 0.000000 0.9505857 0.0000 0.4051869 6.5858425 0.02917083 0.0000000 0.06056667 0.06056667 0.003449197 0.003449197 FALSE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000157106 E001 269.2304510 1.401806878 2.042168e-01 4.349530e-01 16 18804860 18805535 676 - 2.025 2.786 2.541
ENSG00000157106 E002 768.3198223 1.815029746 3.212843e-01 5.608160e-01 16 18805536 18807558 2023 - 2.563 3.192 2.093
ENSG00000157106 E003 77.3312450 0.757251766 1.425697e-01 3.512902e-01 16 18807559 18807759 201 - 1.547 2.216 2.257
ENSG00000157106 E004 36.2411521 0.516460882 1.046839e-01 2.900784e-01 16 18807760 18807832 73 - 1.239 1.887 2.220
ENSG00000157106 E005 246.5109560 1.454475601 3.271131e-01 5.662205e-01 16 18807833 18808891 1059 - 2.100 2.679 1.929
ENSG00000157106 E006 147.8748460 1.314449460 3.810399e-01 6.130550e-01 16 18808892 18809193 302 - 1.931 2.415 1.621
ENSG00000157106 E007 55.5252348 0.753776443 3.122763e-01 5.525919e-01 16 18809194 18809235 42 - 1.536 1.972 1.476
ENSG00000157106 E008 53.4434530 0.729533221 2.796675e-01 5.197643e-01 16 18809236 18809260 25 - 1.502 1.973 1.594
ENSG00000157106 E009 64.2628268 0.786632766 2.917812e-01 5.324532e-01 16 18809261 18809316 56 - 1.581 2.051 1.586
ENSG00000157106 E010 153.1215680 1.358305393 4.580093e-01 6.717585e-01 16 18809317 18809646 330 - 1.985 2.390 1.353
ENSG00000157106 E011 89.6187992 0.426264517 3.162998e-01 5.563437e-01 16 18811761 18811867 107 - 1.776 2.136 1.211
ENSG00000157106 E012 67.4386644 0.410135987 3.177769e-01 5.577459e-01 16 18811948 18812010 63 - 1.653 2.015 1.220
ENSG00000157106 E013 75.8474910 0.878820938 4.197411e-01 6.434627e-01 16 18812011 18812124 114 - 1.704 2.065 1.216
ENSG00000157106 E014 29.4237887 0.576960401 3.631264e-01 5.982396e-01 16 18812125 18812127 3 - 1.306 1.661 1.222
ENSG00000157106 E015 64.1318561 0.024095527 3.294567e-01 5.684232e-01 16 18815175 18815281 107 - 1.665 1.959 0.991
ENSG00000157106 E016 112.7152050 0.001601755 3.776401e-02 1.489917e-01 16 18815440 18815651 212 - 1.958 2.109 0.506
ENSG00000157106 E017 1.8205909 0.235390025 5.804684e-01 7.574738e-01 16 18815652 18816179 528 - 0.402 0.428 0.141
ENSG00000157106 E018 131.1991963 0.009471312 4.646307e-02 1.711753e-01 16 18816302 18816529 228 - 2.031 2.149 0.397
ENSG00000157106 E019 95.5441368 0.006017830 4.083836e-01 6.347921e-01 16 18817291 18817470 180 - 1.872 2.060 0.631
ENSG00000157106 E020 67.3803655 0.014342362 3.999267e-01 6.281782e-01 16 18819502 18819654 153 - 1.729 1.902 0.585
ENSG00000157106 E021 64.1414811 0.001601568 4.705724e-02 1.726639e-01 16 18828031 18828168 138 - 1.723 1.854 0.442
ENSG00000157106 E022 174.3988415 0.003299814 2.927442e-04 3.656569e-03 16 18829286 18829755 470 - 2.164 2.254 0.302
ENSG00000157106 E023 95.5322037 0.015336330 9.608733e-02 2.748810e-01 16 18829926 18830115 190 - 1.896 2.009 0.377
ENSG00000157106 E024 76.3068154 0.021022939 2.751126e-02 1.198187e-01 16 18830219 18830369 151 - 1.819 1.866 0.158
ENSG00000157106 E025 99.5413462 0.015753887 1.273777e-02 6.939007e-02 16 18832940 18833166 227 - 1.933 1.983 0.167
ENSG00000157106 E026 94.4177251 0.010759823 1.555576e-01 3.702333e-01 16 18834204 18834438 235 - 1.883 2.025 0.478
ENSG00000157106 E027 86.7304707 0.013501437 2.215398e-02 1.031154e-01 16 18834892 18835164 273 - 1.867 1.938 0.238
ENSG00000157106 E028 76.5049260 0.022295564 1.536901e-01 3.675918e-01 16 18835933 18836212 280 - 1.802 1.912 0.371
ENSG00000157106 E029 58.8631231 0.058557888 2.006024e-01 4.304696e-01 16 18836360 18836474 115 - 1.706 1.761 0.187
ENSG00000157106 E030 51.1376527 0.039565679 1.539035e-01 3.679053e-01 16 18836475 18836532 58 - 1.642 1.707 0.220
ENSG00000157106 E031 83.3914217 0.045132524 8.379262e-02 2.523616e-01 16 18837253 18837443 191 - 1.861 1.891 0.101
ENSG00000157106 E032 79.2160151 0.020726547 9.060629e-03 5.409588e-02 16 18838014 18838232 219 - 1.845 1.857 0.039
ENSG00000157106 E033 61.7573089 0.002481856 4.627392e-06 1.076342e-04 16 18838357 18838460 104 - 1.749 1.731 -0.062
ENSG00000157106 E034 28.0657386 0.001204268 7.437069e-03 4.673915e-02 16 18838461 18838466 6 - 1.404 1.438 0.119
ENSG00000157106 E035 4.3010824 0.106615407 3.621757e-01 5.974801e-01 16 18838467 18838550 84 - 0.679 0.686 0.033
ENSG00000157106 E036 71.0558448 0.005695675 5.096204e-04 5.766608e-03 16 18838551 18838689 139 - 1.796 1.822 0.088
ENSG00000157106 E037 99.5208204 0.010102923 4.967611e-02 1.788494e-01 16 18839698 18839946 249 - 1.915 2.028 0.377
ENSG00000157106 E038 85.4628917 0.014975371 3.130322e-02 1.312303e-01 16 18841565 18841794 230 - 1.860 1.937 0.258
ENSG00000157106 E039 82.0827785 0.014160624 8.972711e-05 1.364654e-03 16 18842208 18842454 247 - 1.876 1.822 -0.185
ENSG00000157106 E040 75.7957127 0.016153877 1.027134e-02 5.927988e-02 16 18845429 18845651 223 - 1.819 1.858 0.129
ENSG00000157106 E041 70.2013771 0.016486272 1.025957e-02 5.922785e-02 16 18847453 18847607 155 - 1.789 1.819 0.102
ENSG00000157106 E042 0.5845677 0.203497155 6.603568e-01   16 18847739 18847815 77 - 0.139 0.317 1.507
ENSG00000157106 E043 64.9642500 0.027591705 2.926155e-03 2.295705e-02 16 18847816 18848033 218 - 1.778 1.719 -0.198
ENSG00000157106 E044 47.0761158 0.036877646 3.412474e-02 1.391931e-01 16 18849217 18849378 162 - 1.628 1.624 -0.015
ENSG00000157106 E045 48.6612533 0.025039313 2.867705e-02 1.234013e-01 16 18849949 18850126 178 - 1.635 1.658 0.081
ENSG00000157106 E046 57.4161450 0.022372379 3.262228e-03 2.497189e-02 16 18850237 18850467 231 - 1.721 1.688 -0.109
ENSG00000157106 E047 45.6557665 0.018103319 4.488063e-04 5.212340e-03 16 18852067 18852205 139 - 1.634 1.555 -0.268
ENSG00000157106 E048 54.3823144 0.008243323 1.719010e-05 3.360897e-04 16 18852318 18852462 145 - 1.706 1.640 -0.221
ENSG00000157106 E049 77.3912764 0.018665812 1.516888e-03 1.373417e-02 16 18853583 18853867 285 - 1.845 1.818 -0.091
ENSG00000157106 E050 65.9379738 0.030604216 9.624265e-03 5.649573e-02 16 18854656 18854904 249 - 1.777 1.753 -0.082
ENSG00000157106 E051 0.5171231 1.041137467 2.532724e-01   16 18856338 18857785 1448 - 0.000 0.434 21.861
ENSG00000157106 E052 0.2027342 0.039304378 2.874979e-01   16 18857786 18858169 384 - 0.000 0.191 20.239
ENSG00000157106 E053 45.7488772 0.066908040 2.836234e-02 1.223890e-01 16 18858170 18858290 121 - 1.632 1.567 -0.223
ENSG00000157106 E054 0.8096672 0.047830913 4.232249e-01   16 18858291 18859021 731 - 0.245 0.190 -0.465
ENSG00000157106 E055 57.0222361 0.033449852 1.621338e-03 1.447256e-02 16 18859022 18859181 160 - 1.733 1.624 -0.372
ENSG00000157106 E056 0.1426347 0.032464534 8.141495e-01   16 18859182 18859555 374 - 0.075 0.000 -17.176
ENSG00000157106 E057 46.0417449 0.032203158 5.547555e-03 3.746083e-02 16 18859556 18859703 148 - 1.634 1.563 -0.241
ENSG00000157106 E058 1.8692545 0.010824935 1.275687e-01 3.279977e-01 16 18860073 18860203 131 - 0.461 0.322 -0.779
ENSG00000157106 E059 36.9478191 0.020358818 6.364591e-03 4.152055e-02 16 18860667 18860776 110 - 1.530 1.502 -0.095
ENSG00000157106 E060 0.0000000       16 18860777 18861487 711 -      
ENSG00000157106 E061 40.6506371 0.018037796 9.546719e-05 1.438301e-03 16 18863650 18863851 202 - 1.593 1.464 -0.440
ENSG00000157106 E062 32.6220740 0.010647458 8.500767e-06 1.822990e-04 16 18864002 18864144 143 - 1.506 1.342 -0.563
ENSG00000157106 E063 0.3447487 0.687586570 2.169502e-01   16 18866147 18866512 366 - 0.000 0.328 21.263
ENSG00000157106 E064 21.5624457 0.022861142 2.167276e-07 7.411464e-06 16 18866621 18866686 66 - 1.373 0.966 -1.453
ENSG00000157106 E065 22.6284958 0.038759032 1.042453e-05 2.174312e-04 16 18866687 18866775 89 - 1.388 1.016 -1.322
ENSG00000157106 E066 24.6382108 0.009662995 5.550150e-07 1.698276e-05 16 18868190 18868354 165 - 1.407 1.153 -0.893
ENSG00000157106 E067 22.5924950 0.003046672 4.749707e-05 7.961795e-04 16 18868523 18868597 75 - 1.352 1.230 -0.429
ENSG00000157106 E068 19.6594648 0.041600159 2.391946e-02 1.088415e-01 16 18868598 18868632 35 - 1.281 1.211 -0.246
ENSG00000157106 E069 22.8163902 0.008294508 1.164289e-03 1.115693e-02 16 18868633 18868719 87 - 1.342 1.269 -0.254
ENSG00000157106 E070 25.5858484 0.002259577 3.517581e-04 4.256867e-03 16 18869104 18869303 200 - 1.394 1.341 -0.184
ENSG00000157106 E071 19.2193239 0.001981474 6.175863e-05 9.977202e-04 16 18869854 18869994 141 - 1.290 1.153 -0.484
ENSG00000157106 E072 21.7185351 0.013312214 4.012043e-02 1.550074e-01 16 18870610 18870711 102 - 1.295 1.319 0.082
ENSG00000157106 E073 20.3897426 0.006335426 2.716962e-04 3.444939e-03 16 18870801 18870888 88 - 1.303 1.186 -0.412
ENSG00000157106 E074 27.8827337 0.036635931 2.661327e-02 1.171079e-01 16 18871364 18871482 119 - 1.415 1.374 -0.140
ENSG00000157106 E075 33.3554406 0.039637028 1.493545e-02 7.785089e-02 16 18872184 18872345 162 - 1.497 1.435 -0.213
ENSG00000157106 E076 26.7989841 0.053219794 2.907718e-03 2.284619e-02 16 18872494 18872624 131 - 1.430 1.241 -0.659
ENSG00000157106 E077 0.6966548 0.058786643 3.377618e-01   16 18875102 18875607 506 - 0.139 0.421 2.117
ENSG00000157106 E078 0.8346052 0.120522687 4.825991e-01   16 18875608 18875946 339 - 0.245 0.191 -0.458
ENSG00000157106 E079 0.8323924 0.019184088 4.235142e-01   16 18875947 18876123 177 - 0.244 0.191 -0.454
ENSG00000157106 E080 46.3578217 0.049056668 2.370730e-04 3.078487e-03 16 18876124 18876393 270 - 1.671 1.425 -0.843
ENSG00000157106 E081 17.7757367 0.050190156 3.207775e-03 2.464838e-02 16 18877131 18877232 102 - 1.265 1.055 -0.750
ENSG00000157106 E082 0.6951069 0.855171791 4.613034e-01   16 18877233 18879494 2262 - 0.077 0.433 3.143
ENSG00000157106 E083 10.5751432 0.071686401 3.237370e-02 1.343118e-01 16 18879495 18879615 121 - 1.045 0.927 -0.437
ENSG00000157106 E084 20.4067783 0.013549590 3.790716e-07 1.212337e-05 16 18879616 18879719 104 - 1.343 1.014 -1.174
ENSG00000157106 E085 45.3818242 0.021051716 3.655846e-07 1.173494e-05 16 18882165 18882338 174 - 1.665 1.401 -0.905
ENSG00000157106 E086 25.1382131 0.030745404 8.278417e-05 1.278060e-03 16 18884070 18884104 35 - 1.414 1.167 -0.864
ENSG00000157106 E087 30.3992525 0.021561936 4.929110e-06 1.137780e-04 16 18884105 18884167 63 - 1.496 1.242 -0.881
ENSG00000157106 E088 31.6196759 0.001448866 5.521178e-10 3.373958e-08 16 18885090 18885155 66 - 1.510 1.270 -0.829
ENSG00000157106 E089 18.1227959 0.002131788 1.033914e-08 4.838313e-07 16 18885156 18885162 7 - 1.298 0.940 -1.290
ENSG00000157106 E090 36.6944969 0.010609057 1.579588e-10 1.074721e-08 16 18885541 18885666 126 - 1.587 1.243 -1.189
ENSG00000157106 E091 35.8013271 0.042417299 3.196240e-05 5.701629e-04 16 18889372 18889582 211 - 1.570 1.270 -1.037
ENSG00000157106 E092 14.6267314 0.099391954 7.264519e-02 2.301002e-01 16 18889583 18889585 3 - 1.165 1.044 -0.435
ENSG00000157106 E093 20.2227081 0.071945703 5.418256e-02 1.895117e-01 16 18890863 18890888 26 - 1.290 1.206 -0.295
ENSG00000157106 E094 20.6990332 0.059915387 7.700801e-03 4.793417e-02 16 18890889 18890921 33 - 1.320 1.138 -0.641
ENSG00000157106 E095 30.9539925 0.026921734 3.247137e-05 5.774226e-04 16 18892218 18892354 137 - 1.497 1.260 -0.822
ENSG00000157106 E096 25.0353739 0.016128064 5.605323e-07 1.714849e-05 16 18896052 18896207 156 - 1.421 1.117 -1.070
ENSG00000157106 E097 12.3167566 0.025230328 8.293742e-06 1.783774e-04 16 18896793 18896800 8 - 1.148 0.732 -1.572
ENSG00000157106 E098 22.7346684 0.027508268 2.087141e-05 3.961160e-04 16 18896801 18896956 156 - 1.379 1.097 -0.994
ENSG00000157106 E099 4.6384592 0.117519575 5.319642e-02 1.872603e-01 16 18899987 18900044 58 - 0.749 0.508 -1.054
ENSG00000157106 E100 0.1779838 0.057642519 8.133745e-01   16 18911363 18911713 351 - 0.075 0.000 -17.181
ENSG00000157106 E101 1.0233601 0.019411430 5.229737e-01   16 18924916 18925546 631 - 0.195 0.424 1.545
ENSG00000157106 E102 0.1779838 0.057642519 8.133745e-01   16 18925679 18925949 271 - 0.075 0.000 -17.181
ENSG00000157106 E103 26.8950214 0.108118786 2.344349e-01 4.701887e-01 16 18925950 18926408 459 - 1.391 1.390 -0.004