ENSG00000152818

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000367526 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding protein_coding 6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 0.5036945 1.0745943 0.09046815 0.4938743 0.09046815 -3.432345 0.10773333 0.19450000 0.009033333 -0.18546667 0.01415743 0.01415743 FALSE TRUE
ENST00000367545 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding protein_coding 6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 2.2619361 0.6941034 3.36347116 0.3521295 0.47083201 2.260375 0.28099583 0.14536667 0.380200000 0.23483333 0.22618172 0.01415743 FALSE TRUE
ENST00000417142 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding protein_coding 6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 0.7814991 0.5613259 1.56012379 0.3057659 0.84018346 1.458493 0.09492083 0.08433333 0.166066667 0.08173333 0.95393365 0.01415743 FALSE FALSE
ENST00000455022 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding protein_coding 6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 0.1000501 0.2867383 0.00000000 0.2867383 0.00000000 -4.891119 0.02475833 0.12703333 0.000000000 -0.12703333 0.87163457 0.01415743 FALSE FALSE
MSTRG.29095.2 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding   6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 0.2397540 0.1366719 0.59751731 0.1366719 0.40199814 2.050333 0.02913333 0.02140000 0.071433333 0.05003333 0.82118193 0.01415743 FALSE TRUE
MSTRG.29095.4 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding   6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 1.3500955 0.7465639 2.54497284 0.3619742 0.14686468 1.755774 0.18447500 0.13413333 0.288733333 0.15460000 0.15502488 0.01415743 FALSE TRUE
MSTRG.29095.9 ENSG00000152818 HEK293_OSMI2_6hA HEK293_TMG_6hB UTRN protein_coding   6.62199 5.157735 8.836004 1.455827 0.6182119 0.7754939 1.1346795 1.6577373 0.38353785 0.6336847 0.23356966 -2.083318 0.24714167 0.29323333 0.047266667 -0.24596667 0.20689108 0.01415743 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000152818 E001 14.0267699 0.1292614305 6.702256e-01 8.164614e-01 6 144285335 144285700 366 + 1.157 1.116 -0.147
ENSG00000152818 E002 9.0704190 0.0037470208 8.224916e-02 2.492166e-01 6 144285701 144285821 121 + 1.016 0.852 -0.615
ENSG00000152818 E003 1.7176821 0.2891226141 9.112981e-01 9.578514e-01 6 144286452 144286571 120 + 0.387 0.414 0.149
ENSG00000152818 E004 21.7787822 0.0019841499 1.017775e-04 1.517885e-03 6 144291737 144291907 171 + 1.385 1.087 -1.051
ENSG00000152818 E005 0.0000000       6 144330820 144331018 199 +      
ENSG00000152818 E006 0.0000000       6 144344101 144344304 204 +      
ENSG00000152818 E007 18.9046933 0.0021384047 2.185936e-03 1.831206e-02 6 144403123 144403184 62 + 1.318 1.087 -0.819
ENSG00000152818 E008 22.1382094 0.0075204078 1.594064e-05 3.144850e-04 6 144421878 144421970 93 + 1.412 1.028 -1.358
ENSG00000152818 E009 20.0383161 0.0074086148 5.785125e-07 1.763732e-05 6 144423549 144423626 78 + 1.380 0.883 -1.791
ENSG00000152818 E010 19.1186846 0.0021299785 3.325899e-03 2.534845e-02 6 144423986 144424078 93 + 1.322 1.105 -0.768
ENSG00000152818 E011 22.8761604 0.0020321791 9.438929e-03 5.569754e-02 6 144426287 144426459 173 + 1.388 1.225 -0.569
ENSG00000152818 E012 19.4819567 0.0029517989 4.537118e-04 5.254265e-03 6 144428778 144428893 116 + 1.342 1.068 -0.974
ENSG00000152818 E013 20.3992802 0.0622121593 1.471107e-02 7.700482e-02 6 144429581 144429741 161 + 1.362 1.070 -1.036
ENSG00000152818 E014 23.9437332 0.0186917749 4.769374e-04 5.468197e-03 6 144435935 144436138 204 + 1.432 1.101 -1.162
ENSG00000152818 E015 25.0263902 0.0159359002 7.920099e-03 4.895263e-02 6 144437565 144437746 182 + 1.430 1.210 -0.767
ENSG00000152818 E016 23.0303715 0.0016519372 9.008664e-04 9.101908e-03 6 144438745 144438895 151 + 1.399 1.170 -0.804
ENSG00000152818 E017 22.8417513 0.0079666967 3.414453e-07 1.106589e-05 6 144440352 144440471 120 + 1.430 0.938 -1.758
ENSG00000152818 E018 21.0917395 0.0016099810 3.693466e-06 8.865518e-05 6 144444281 144444382 102 + 1.388 1.008 -1.352
ENSG00000152818 E019 22.2086817 0.0027778615 7.394113e-03 4.651739e-02 6 144447211 144447318 108 + 1.377 1.198 -0.626
ENSG00000152818 E020 31.2044514 0.0011222618 5.180426e-04 5.839731e-03 6 144447602 144447781 180 + 1.519 1.320 -0.687
ENSG00000152818 E021 31.1049471 0.0089383585 6.358031e-04 6.890051e-03 6 144448600 144448769 170 + 1.528 1.274 -0.880
ENSG00000152818 E022 23.3574661 0.0238452756 3.127560e-03 2.417641e-02 6 144451370 144451493 124 + 1.410 1.121 -1.016
ENSG00000152818 E023 22.6476220 0.0201023955 1.197895e-02 6.634890e-02 6 144453782 144453869 88 + 1.386 1.155 -0.814
ENSG00000152818 E024 30.7976788 0.0055193447 4.147314e-02 1.585583e-01 6 144458770 144459011 242 + 1.494 1.387 -0.366
ENSG00000152818 E025 23.4177615 0.0322390802 3.213040e-01 5.608298e-01 6 144459174 144459354 181 + 1.373 1.309 -0.222
ENSG00000152818 E026 23.3763728 0.0304407664 2.777777e-01 5.178581e-01 6 144461197 144461342 146 + 1.374 1.299 -0.260
ENSG00000152818 E027 28.5057454 0.0212567597 7.884486e-02 2.425226e-01 6 144462654 144462866 213 + 1.468 1.334 -0.463
ENSG00000152818 E028 20.5927886 0.0019109490 1.679478e-02 8.470862e-02 6 144473720 144473833 114 + 1.339 1.184 -0.543
ENSG00000152818 E029 27.7507906 0.0015259724 2.840383e-07 9.393621e-06 6 144474604 144474759 156 + 1.505 1.138 -1.282
ENSG00000152818 E030 33.1607895 0.0013264315 2.342666e-06 5.994253e-05 6 144479812 144479982 171 + 1.567 1.275 -1.008
ENSG00000152818 E031 33.2165754 0.0014711303 1.098579e-04 1.617092e-03 6 144482209 144482388 180 + 1.548 1.320 -0.785
ENSG00000152818 E032 29.8319463 0.0011993809 2.085574e-03 1.764012e-02 6 144485385 144485519 135 + 1.494 1.320 -0.601
ENSG00000152818 E033 29.7681295 0.0014623424 3.345908e-02 1.373688e-01 6 144487548 144487697 150 + 1.479 1.379 -0.344
ENSG00000152818 E034 30.1725816 0.0013347042 2.220728e-02 1.032980e-01 6 144488673 144488834 162 + 1.488 1.379 -0.376
ENSG00000152818 E035 27.3004424 0.0230453651 2.401228e-02 1.091206e-01 6 144490071 144490199 129 + 1.465 1.278 -0.648
ENSG00000152818 E036 29.6693123 0.0215233259 3.282114e-02 1.355657e-01 6 144490929 144491102 174 + 1.496 1.322 -0.601
ENSG00000152818 E037 30.4704712 0.0967961639 2.562004e-01 4.949629e-01 6 144493301 144493456 156 + 1.505 1.326 -0.621
ENSG00000152818 E038 36.1732293 0.0186447356 8.970794e-02 2.632670e-01 6 144499257 144499427 171 + 1.564 1.442 -0.418
ENSG00000152818 E039 33.4671591 0.0082477990 2.741168e-02 1.195340e-01 6 144510944 144511123 180 + 1.531 1.404 -0.437
ENSG00000152818 E040 31.9473623 0.0013638276 9.239888e-03 5.486523e-02 6 144513909 144514037 129 + 1.516 1.388 -0.441
ENSG00000152818 E041 37.5183040 0.0010233925 1.361808e-04 1.935445e-03 6 144514650 144514820 171 + 1.597 1.397 -0.685
ENSG00000152818 E042 33.3606142 0.0037978046 3.841857e-04 4.579782e-03 6 144516229 144516387 159 + 1.547 1.331 -0.745
ENSG00000152818 E043 35.0339003 0.0018031592 1.285589e-03 1.205203e-02 6 144516811 144516948 138 + 1.558 1.388 -0.581
ENSG00000152818 E044 43.3116909 0.0122411750 1.837129e-01 4.087370e-01 6 144521980 144522171 192 + 1.618 1.569 -0.167
ENSG00000152818 E045 43.8904913 0.0072508071 2.496044e-01 4.874495e-01 6 144523016 144523188 173 + 1.620 1.587 -0.112
ENSG00000152818 E046 39.4639265 0.0120080094 4.454878e-01 6.624285e-01 6 144531052 144531202 151 + 1.574 1.561 -0.044
ENSG00000152818 E047 40.0374900 0.0032523957 1.139581e-01 3.057023e-01 6 144533085 144533260 176 + 1.592 1.545 -0.162
ENSG00000152818 E048 40.0591537 0.0015696816 1.623166e-01 3.802292e-01 6 144537582 144537717 136 + 1.588 1.558 -0.103
ENSG00000152818 E049 36.9917937 0.0023396135 5.606128e-01 7.437335e-01 6 144539294 144539443 150 + 1.539 1.558 0.062
ENSG00000152818 E050 20.8115239 0.0017036678 2.094373e-01 4.412047e-01 6 144542795 144542870 76 + 1.254 1.406 0.531
ENSG00000152818 E051 41.9675569 0.0008938221 1.955220e-01 4.240097e-01 6 144548640 144548854 215 + 1.552 1.681 0.436
ENSG00000152818 E052 31.7827518 0.0019702725 7.707600e-01 8.791123e-01 6 144550965 144551082 118 + 1.453 1.527 0.254
ENSG00000152818 E053 41.8088201 0.0009293893 9.803378e-01 9.919492e-01 6 144554688 144554893 206 + 1.574 1.627 0.179
ENSG00000152818 E054 42.1707752 0.0013854667 4.148208e-01 6.396956e-01 6 144557157 144557311 155 + 1.597 1.604 0.025
ENSG00000152818 E055 53.3522696 0.0009391548 7.041133e-02 2.255214e-01 6 144577099 144577288 190 + 1.650 1.797 0.499
ENSG00000152818 E056 0.0000000       6 144583210 144583600 391 +      
ENSG00000152818 E057 0.0000000       6 144659844 144660275 432 +      
ENSG00000152818 E058 52.9692364 0.0009483746 1.353947e-01 3.403969e-01 6 144678406 144678578 173 + 1.648 1.779 0.446
ENSG00000152818 E059 46.5245830 0.0083628601 9.938972e-01 9.985616e-01 6 144700087 144700243 157 + 1.616 1.668 0.177
ENSG00000152818 E060 44.8789347 0.0010920537 2.101731e-01 4.420496e-01 6 144730357 144730486 130 + 1.579 1.703 0.422
ENSG00000152818 E061 63.3041079 0.0007790386 3.197721e-01 5.594957e-01 6 144748246 144748514 269 + 1.734 1.835 0.339
ENSG00000152818 E062 37.1998851 0.0029244184 5.317085e-01 7.232386e-01 6 144751806 144751952 147 + 1.514 1.609 0.325
ENSG00000152818 E063 0.1614157 0.0378591789 1.000000e+00   6 144754714 144754719 6 + 0.081 0.000 -9.292
ENSG00000152818 E064 38.8749303 0.0035569010 2.693974e-01 5.091997e-01 6 144754720 144754798 79 + 1.519 1.646 0.432
ENSG00000152818 E065 36.5344172 0.0010461530 1.067309e-01 2.935542e-01 6 144757929 144757989 61 + 1.485 1.637 0.518
ENSG00000152818 E066 0.0000000       6 144757990 144758310 321 +      
ENSG00000152818 E067 42.9011633 0.0008485281 5.312374e-01 7.229308e-01 6 144771907 144771968 62 + 1.576 1.666 0.306
ENSG00000152818 E068 43.1926598 0.0009214114 8.916199e-01 9.474620e-01 6 144774290 144774364 75 + 1.590 1.637 0.158
ENSG00000152818 E069 59.1344096 0.0020187574 8.318440e-01 9.149119e-01 6 144781922 144782123 202 + 1.725 1.768 0.146
ENSG00000152818 E070 27.6388270 0.0101586260 8.084779e-01 9.012691e-01 6 144789194 144789228 35 + 1.407 1.445 0.129
ENSG00000152818 E071 24.1584719 0.0098184763 9.529086e-01 9.784371e-01 6 144789229 144789279 51 + 1.340 1.404 0.223
ENSG00000152818 E072 39.4196549 0.0172071286 8.348913e-01 9.164485e-01 6 144793834 144793991 158 + 1.544 1.628 0.285
ENSG00000152818 E073 0.0000000       6 144797745 144797823 79 +      
ENSG00000152818 E074 50.0504746 0.0011660651 5.828036e-02 1.989216e-01 6 144797824 144797990 167 + 1.619 1.775 0.529
ENSG00000152818 E075 0.0000000       6 144799381 144799473 93 +      
ENSG00000152818 E076 44.3089939 0.0008559091 3.882864e-03 2.848750e-02 6 144803036 144803147 112 + 1.545 1.757 0.719
ENSG00000152818 E077 61.7643374 0.0006624556 3.097915e-04 3.829863e-03 6 144820882 144821018 137 + 1.684 1.906 0.749
ENSG00000152818 E078 36.7530331 0.0019963035 1.899457e-02 9.244324e-02 6 144827348 144827386 39 + 1.474 1.675 0.686
ENSG00000152818 E079 48.5643374 0.0021709728 1.748979e-01 3.970229e-01 6 144827611 144827676 66 + 1.615 1.744 0.438
ENSG00000152818 E080 47.9481180 0.0013412103 7.394573e-02 2.326618e-01 6 144828790 144828855 66 + 1.604 1.752 0.504
ENSG00000152818 E081 60.5525619 0.0007059819 2.041799e-02 9.737121e-02 6 144835780 144835938 159 + 1.697 1.860 0.551
ENSG00000152818 E082 34.3903402 0.0020763439 7.795302e-02 2.407167e-01 6 144836301 144836372 72 + 1.452 1.616 0.563
ENSG00000152818 E083 52.6841658 0.0056482506 3.496393e-03 2.631950e-02 6 144836373 144836541 169 + 1.606 1.835 0.775
ENSG00000152818 E084 0.0000000       6 144836542 144836613 72 +      
ENSG00000152818 E085 0.3228314 0.4184964340 7.305629e-01   6 144837114 144837244 131 + 0.149 0.000 -10.298
ENSG00000152818 E086 0.5173834 0.0730398499 3.373212e-01   6 144839049 144839172 124 + 0.208 0.000 -10.884
ENSG00000152818 E087 30.5150316 0.0215151865 5.784228e-02 1.979635e-01 6 144839173 144839223 51 + 1.380 1.601 0.758
ENSG00000152818 E088 32.5143628 0.0204859999 1.817597e-03 1.582029e-02 6 144839224 144839284 61 + 1.364 1.689 1.114
ENSG00000152818 E089 39.0152534 0.0336589087 1.926340e-04 2.594059e-03 6 144840740 144840832 93 + 1.390 1.818 1.460
ENSG00000152818 E090 28.1171491 0.1283522249 5.279737e-02 1.862411e-01 6 144846805 144846827 23 + 1.275 1.657 1.315
ENSG00000152818 E091 244.0999736 1.5428643710 2.499373e-01 4.878467e-01 6 144850989 144853034 2046 + 2.109 2.655 1.822