ENSG00000151503

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000526422 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding protein_coding 41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 2.141367 2.413949 1.10491615 0.6258046 0.22878727 -1.120424 0.05577500 0.072866667 0.0209333333 -0.051933333 1.701198e-03 1.984028e-07   FALSE
ENST00000530396 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding nonsense_mediated_decay 41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 1.974066 3.187025 0.40513343 0.7858063 0.40513343 -2.945083 0.05835417 0.094833333 0.0073666667 -0.087466667 7.566703e-02 1.984028e-07 TRUE TRUE
ENST00000685324 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding protein_coding 41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 12.930252 5.455260 23.63352488 1.9924046 2.06498554 2.113083 0.28159167 0.161066667 0.4518666667 0.290800000 2.110639e-03 1.984028e-07 FALSE TRUE
ENST00000688263 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding protein_coding 41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 0.949354 0.166955 3.10254388 0.1669550 0.16237513 4.136639 0.01907500 0.003933333 0.0601333333 0.056200000 4.949008e-02 1.984028e-07 FALSE TRUE
ENST00000689387 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding nonsense_mediated_decay 41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 1.823646 3.020835 0.05020852 0.9776521 0.05020852 -5.653604 0.05473333 0.087233333 0.0009333333 -0.086300000 1.984028e-07 1.984028e-07 FALSE TRUE
ENST00000692494 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding retained_intron 41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 2.919983 2.286214 4.01777011 0.4626906 0.08336758 0.810724 0.07617083 0.087066667 0.0773333333 -0.009733333 9.923266e-01 1.984028e-07 TRUE TRUE
MSTRG.6592.15 ENSG00000151503 HEK293_OSMI2_6hA HEK293_TMG_6hB NCAPD3 protein_coding   41.82296 32.98889 52.09493 7.188071 2.310654 0.6590023 12.144276 9.747854 15.10639054 2.5052840 0.69353009 0.631478 0.28099167 0.293733333 0.2904333333 -0.003300000 1.000000e+00 1.984028e-07 TRUE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000151503 E001 0.6682002 0.0238930390 5.478221e-01   11 134150113 134150118 6 - 0.249 0.147 -0.937
ENSG00000151503 E002 16.6840002 0.1947567939 3.173837e-03 2.445434e-02 11 134150119 134150583 465 - 0.885 1.507 2.222
ENSG00000151503 E003 1.8514306 0.0121508533 6.613053e-02 2.163758e-01 11 134150584 134150662 79 - 0.308 0.626 1.643
ENSG00000151503 E004 3.6026426 0.0085635881 4.824717e-04 5.516380e-03 11 134150663 134150689 27 - 0.360 0.896 2.412
ENSG00000151503 E005 105.8864680 1.1670875616 2.338669e-01 4.695990e-01 11 134150690 134151867 1178 - 1.772 2.240 1.573
ENSG00000151503 E006 17.0159320 0.3797701953 1.636974e-01 3.822229e-01 11 134151868 134151925 58 - 1.077 1.421 1.212
ENSG00000151503 E007 45.6250914 0.0020783737 2.799130e-04 3.528671e-03 11 134151926 134152433 508 - 1.563 1.777 0.728
ENSG00000151503 E008 6.9331970 0.0041896566 4.081636e-02 1.568371e-01 11 134152434 134152440 7 - 0.771 1.028 0.980
ENSG00000151503 E009 6.6360259 0.0274212270 6.843482e-03 4.391221e-02 11 134152441 134152444 4 - 0.664 1.062 1.544
ENSG00000151503 E010 8.1275110 0.0416299855 2.988234e-02 1.269880e-01 11 134152445 134152455 11 - 0.789 1.118 1.234
ENSG00000151503 E011 9.1988470 0.1330490306 2.306641e-01 4.659032e-01 11 134152456 134152461 6 - 0.871 1.133 0.968
ENSG00000151503 E012 9.2176280 0.0922738882 1.906465e-01 4.177162e-01 11 134152462 134152462 1 - 0.872 1.130 0.955
ENSG00000151503 E013 9.9549812 0.0499420517 3.973364e-02 1.540392e-01 11 134152463 134152478 16 - 0.872 1.186 1.154
ENSG00000151503 E014 10.5926339 0.0383031244 3.164148e-02 1.321720e-01 11 134152479 134152481 3 - 0.901 1.207 1.120
ENSG00000151503 E015 73.6905950 0.0045865752 5.973948e-07 1.812808e-05 11 134152482 134152577 96 - 1.727 2.005 0.937
ENSG00000151503 E016 109.9300954 0.0004206018 2.570157e-07 8.610609e-06 11 134152578 134152625 48 - 1.947 2.139 0.645
ENSG00000151503 E017 115.8316977 0.0054028867 1.518382e-03 1.374061e-02 11 134152626 134152642 17 - 1.977 2.151 0.583
ENSG00000151503 E018 501.1020322 0.0001555073 9.289679e-16 1.565081e-13 11 134152643 134153010 368 - 2.626 2.773 0.489
ENSG00000151503 E019 201.6394590 0.0002249312 3.317173e-05 5.882136e-04 11 134153011 134153052 42 - 2.247 2.366 0.400
ENSG00000151503 E020 235.6663349 0.0002480418 6.632649e-07 1.989361e-05 11 134153140 134153200 61 - 2.306 2.439 0.443
ENSG00000151503 E021 281.4000398 0.0015671759 6.877510e-03 4.407560e-02 11 134153289 134153363 75 - 2.402 2.493 0.303
ENSG00000151503 E022 63.7531735 0.1681174250 8.451460e-01 9.222086e-01 11 134153364 134153708 345 - 1.753 1.867 0.386
ENSG00000151503 E023 29.3508834 0.2009340285 9.151078e-01 9.597131e-01 11 134153709 134153795 87 - 1.429 1.532 0.352
ENSG00000151503 E024 288.1118092 0.1550358537 8.144262e-01 9.048985e-01 11 134153796 134156751 2956 - 2.403 2.516 0.378
ENSG00000151503 E025 16.5334930 0.1855101075 7.395836e-01 8.601608e-01 11 134156752 134156818 67 - 1.203 1.275 0.255
ENSG00000151503 E026 20.4789607 0.2179430140 7.878143e-01 8.892999e-01 11 134156819 134156922 104 - 1.281 1.378 0.335
ENSG00000151503 E027 22.2730139 0.1967160495 5.012616e-01 7.016846e-01 11 134156923 134157017 95 - 1.398 1.287 -0.387
ENSG00000151503 E028 278.5994517 0.0010957789 1.680274e-01 3.879452e-01 11 134157018 134157095 78 - 2.414 2.466 0.173
ENSG00000151503 E029 6.7417470 0.0046606609 4.783007e-01 6.859661e-01 11 134157208 134157927 720 - 0.841 0.938 0.370
ENSG00000151503 E030 391.3745600 0.0010844237 1.401117e-04 1.981198e-03 11 134157928 134158067 140 - 2.538 2.644 0.355
ENSG00000151503 E031 354.9878654 0.0017749864 1.036654e-07 3.829622e-06 11 134158329 134158495 167 - 2.468 2.633 0.550
ENSG00000151503 E032 393.9102797 0.0004309845 4.681448e-06 1.087427e-04 11 134159892 134160074 183 - 2.541 2.649 0.359
ENSG00000151503 E033 301.7546641 0.0038694522 4.337167e-01 6.540309e-01 11 134161781 134161891 111 - 2.450 2.499 0.165
ENSG00000151503 E034 440.7570632 0.0008127567 7.934158e-02 2.434944e-01 11 134167996 134168195 200 - 2.613 2.667 0.182
ENSG00000151503 E035 268.5461202 0.0004577244 1.158076e-01 3.088718e-01 11 134168469 134168528 60 - 2.398 2.451 0.175
ENSG00000151503 E036 270.1986827 0.0001858989 1.288737e-01 3.300068e-01 11 134168529 134168600 72 - 2.405 2.453 0.161
ENSG00000151503 E037 161.5269608 0.0006772875 4.202626e-01 6.438337e-01 11 134168601 134168602 2 - 2.207 2.198 -0.030
ENSG00000151503 E038 349.7872718 0.0058299584 4.466266e-01 6.631683e-01 11 134168917 134169054 138 - 2.537 2.532 -0.019
ENSG00000151503 E039 261.3942523 0.0023251437 1.653138e-01 3.843689e-01 11 134176307 134176383 77 - 2.421 2.395 -0.086
ENSG00000151503 E040 145.1925771 0.0031676028 2.147710e-02 1.008993e-01 11 134176384 134176386 3 - 2.187 2.111 -0.252
ENSG00000151503 E041 0.3453689 0.0277504010 7.587751e-01   11 134176387 134176432 46 - 0.100 0.147 0.649
ENSG00000151503 E042 405.9981613 0.0032563596 8.922959e-02 2.623347e-01 11 134177219 134177457 239 - 2.615 2.579 -0.121
ENSG00000151503 E043 0.6847684 0.0187336734 5.446685e-01   11 134178483 134178633 151 - 0.249 0.147 -0.939
ENSG00000151503 E044 224.5604666 0.0323470831 3.189461e-01 5.586722e-01 11 134178634 134178741 108 - 2.305 2.398 0.309
ENSG00000151503 E045 196.0014972 0.2781820872 2.763093e-01 5.163143e-01 11 134178822 134178936 115 - 2.205 2.385 0.600
ENSG00000151503 E046 1.1682076 0.0344329470 8.700673e-01   11 134180163 134180309 147 - 0.308 0.345 0.228
ENSG00000151503 E047 0.8346052 0.1884468199 4.401882e-01   11 134180310 134180334 25 - 0.310 0.148 -1.361
ENSG00000151503 E048 223.5515394 0.0284991611 3.874505e-01 6.184489e-01 11 134181077 134181184 108 - 2.312 2.386 0.248
ENSG00000151503 E049 5.2886095 0.0108529657 5.157691e-03 3.544697e-02 11 134183013 134183153 141 - 0.585 0.977 1.577
ENSG00000151503 E050 239.2389054 0.0034260468 7.640041e-01 8.750563e-01 11 134184637 134184752 116 - 2.364 2.387 0.078
ENSG00000151503 E051 0.3228314 0.4039439716 4.618280e-01   11 134184753 134184773 21 - 0.181 0.000 -11.689
ENSG00000151503 E052 248.7281087 0.0002381735 5.983335e-01 7.691183e-01 11 134184903 134185000 98 - 2.390 2.392 0.007
ENSG00000151503 E053 291.9169025 0.0011745960 3.708620e-02 1.471367e-01 11 134185335 134185526 192 - 2.473 2.433 -0.133
ENSG00000151503 E054 0.6622309 0.1894994779 1.310447e-01   11 134192191 134192688 498 - 0.310 0.000 -12.695
ENSG00000151503 E055 319.7406340 0.0004673535 2.580293e-06 6.513945e-05 11 134192689 134192909 221 - 2.532 2.441 -0.304
ENSG00000151503 E056 286.7333943 0.0011478445 9.205082e-04 9.266358e-03 11 134194016 134194150 135 - 2.479 2.404 -0.248
ENSG00000151503 E057 279.5566850 0.0009785868 1.773462e-04 2.418491e-03 11 134194665 134194734 70 - 2.470 2.385 -0.282
ENSG00000151503 E058 182.9336550 0.0009108926 1.595474e-06 4.277004e-05 11 134194735 134194738 4 - 2.303 2.169 -0.449
ENSG00000151503 E059 309.1624990 0.0012346765 6.483503e-05 1.040295e-03 11 134202816 134202905 90 - 2.517 2.423 -0.311
ENSG00000151503 E060 229.4826032 0.0028901781 6.269734e-02 2.088104e-01 11 134203142 134203198 57 - 2.372 2.321 -0.171
ENSG00000151503 E061 0.0000000       11 134203199 134203653 455 -      
ENSG00000151503 E062 399.4068111 0.0001416353 8.284839e-05 1.278935e-03 11 134203654 134203906 253 - 2.616 2.557 -0.197
ENSG00000151503 E063 280.2835703 0.0006002577 3.268145e-05 5.804289e-04 11 134204046 134204171 126 - 2.472 2.383 -0.297
ENSG00000151503 E064 205.5708351 0.0025224842 5.145406e-03 3.538115e-02 11 134204899 134204971 73 - 2.337 2.249 -0.292
ENSG00000151503 E065 0.9630002 0.4604759413 1.416949e-01   11 134205610 134206598 989 - 0.098 0.482 2.998
ENSG00000151503 E066 244.1723269 0.0021422539 3.285665e-05 5.832966e-04 11 134206599 134206732 134 - 2.423 2.303 -0.403
ENSG00000151503 E067 114.4785992 0.0058476007 2.207217e-03 1.844848e-02 11 134208864 134208878 15 - 2.102 1.959 -0.480
ENSG00000151503 E068 178.4542954 0.0016080330 3.437737e-08 1.424962e-06 11 134208879 134208951 73 - 2.305 2.131 -0.580
ENSG00000151503 E069 1.5165406 0.3589343942 7.213317e-01 8.489817e-01 11 134208952 134209144 193 - 0.411 0.349 -0.353
ENSG00000151503 E070 167.9248418 0.0002899939 1.453618e-10 9.965999e-09 11 134209145 134209206 62 - 2.278 2.103 -0.586
ENSG00000151503 E071 0.6188717 0.0321515531 6.838952e-01   11 134209207 134209232 26 - 0.180 0.257 0.648
ENSG00000151503 E072 237.5316537 0.0002008685 1.141850e-07 4.177345e-06 11 134209313 134209477 165 - 2.411 2.295 -0.385
ENSG00000151503 E073 0.3206185 0.0274424043 3.448437e-01   11 134209478 134209734 257 - 0.181 0.000 -11.683
ENSG00000151503 E074 0.5474829 0.1892665871 4.991655e-02   11 134210263 134210269 7 - 0.000 0.349 13.551
ENSG00000151503 E075 267.0047348 0.0001945906 1.245066e-13 1.522252e-11 11 134210270 134210454 185 - 2.477 2.319 -0.528
ENSG00000151503 E076 256.7775418 0.0018121426 1.085977e-08 5.054093e-07 11 134216936 134217098 163 - 2.460 2.298 -0.543
ENSG00000151503 E077 0.0000000       11 134217099 134217944 846 -      
ENSG00000151503 E078 0.1308682 0.0326491905 3.264901e-01   11 134220391 134220491 101 - 0.000 0.147 11.933
ENSG00000151503 E079 257.5096039 0.0009963337 1.280120e-15 2.112671e-13 11 134220572 134220726 155 - 2.475 2.267 -0.695
ENSG00000151503 E080 3.6405487 0.1732716015 7.361854e-01 8.580787e-01 11 134221426 134223092 1667 - 0.622 0.675 0.228
ENSG00000151503 E081 29.2791840 0.0133546770 1.583191e-12 1.571375e-10 11 134223093 134223482 390 - 1.109 1.752 2.228
ENSG00000151503 E082 164.3259106 0.0009072690 1.761619e-02 8.770551e-02 11 134223863 134224000 138 - 2.234 2.175 -0.198
ENSG00000151503 E083 33.7702808 0.0010601884 1.867304e-01 4.127334e-01 11 134224001 134224286 286 - 1.557 1.489 -0.234
ENSG00000151503 E084 27.7836357 0.0011995061 8.817672e-02 2.603425e-01 11 134224287 134224554 268 - 1.490 1.387 -0.356
ENSG00000151503 E085 2.2973077 0.0334078372 5.012549e-02 1.799776e-01 11 134225097 134225504 408 - 0.359 0.700 1.642