ENSG00000145362

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000514167 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding protein_coding 3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.31775667 0.3948935 0.0000000 0.3237073 0.00000000 -5.3394704 0.11104167 0.14073333 0.0000000 -0.14073333 0.3270637921 0.0001544964 FALSE FALSE
ENST00000672759 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding protein_coding 3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.06328128 0.0000000 0.2376502 0.0000000 0.23765021 4.6302319 0.01720000 0.00000000 0.0800000 0.08000000 0.8991730567 0.0001544964 FALSE TRUE
ENST00000672955 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding protein_coding 3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.44882319 0.0000000 0.5661872 0.0000000 0.28403196 5.8484657 0.10280833 0.00000000 0.1975667 0.19756667 0.3595073022 0.0001544964 FALSE TRUE
ENST00000681990 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding retained_intron 3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.12030790 0.4279394 0.0000000 0.1885100 0.00000000 -5.4526593 0.04204583 0.18646667 0.0000000 -0.18646667 0.0001544964 0.0001544964 FALSE TRUE
ENST00000682049 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding retained_intron 3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.22344080 0.2140741 0.0000000 0.2140741 0.00000000 -4.4859040 0.08204167 0.08956667 0.0000000 -0.08956667 0.8246603702 0.0001544964 FALSE TRUE
MSTRG.25367.1 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding   3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.58543836 0.4634812 0.9597753 0.1064908 0.13638897 1.0343433 0.17322917 0.20730000 0.3282667 0.12096667 0.4959804864 0.0001544964 FALSE TRUE
MSTRG.25367.22 ENSG00000145362 HEK293_OSMI2_6hA HEK293_TMG_6hB ANK2 protein_coding   3.531022 2.359295 2.906873 0.698506 0.1433556 0.299965 0.97185613 0.4462652 0.5938342 0.1296427 0.06507454 0.4042801 0.22777500 0.19910000 0.2070000 0.00790000 1.0000000000 0.0001544964 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000145362 E001 1.8864722 0.012453932 3.596495e-01 5.955454e-01 4 112706088 112706217 130 + 0.364 0.530 0.862
ENSG00000145362 E002 0.0000000       4 112818032 112818052 21 +      
ENSG00000145362 E003 0.1779838 0.037483466 7.138474e-01   4 112818053 112818063 11 + 0.101 0.000 -12.785
ENSG00000145362 E004 0.5173834 0.059494549 1.725623e-01   4 112818064 112818093 30 + 0.253 0.000 -14.175
ENSG00000145362 E005 0.5173834 0.059494549 1.725623e-01   4 112818094 112818103 10 + 0.253 0.000 -14.175
ENSG00000145362 E006 0.5173834 0.059494549 1.725623e-01   4 112818104 112818104 1 + 0.253 0.000 -14.175
ENSG00000145362 E007 0.6787990 0.051926163 9.212240e-02   4 112818105 112818108 4 + 0.313 0.000 -14.563
ENSG00000145362 E008 2.2875346 0.069686730 1.733118e-01 3.949217e-01 4 112818109 112818155 47 + 0.592 0.339 -1.297
ENSG00000145362 E009 2.1095508 0.071539411 2.327516e-01 4.683270e-01 4 112818156 112818157 2 + 0.561 0.339 -1.157
ENSG00000145362 E010 4.5542476 0.006557419 3.545138e-01 5.913253e-01 4 112818158 112818264 107 + 0.777 0.660 -0.484
ENSG00000145362 E011 0.0000000       4 112860943 112860992 50 +      
ENSG00000145362 E012 0.0000000       4 112860993 112861019 27 +      
ENSG00000145362 E013 0.0000000       4 112861020 112861064 45 +      
ENSG00000145362 E014 0.0000000       4 112861065 112861077 13 +      
ENSG00000145362 E015 0.0000000       4 112861078 112861135 58 +      
ENSG00000145362 E016 4.5834897 0.006522247 8.939037e-01 9.486593e-01 4 112904455 112904514 60 + 0.737 0.730 -0.029
ENSG00000145362 E017 0.4514866 0.021768165 8.181688e-01   4 112904515 112906508 1994 + 0.183 0.145 -0.407
ENSG00000145362 E018 0.1614157 0.034268687 7.142737e-01   4 112949105 112949215 111 + 0.101 0.000 -12.797
ENSG00000145362 E019 0.1614157 0.034268687 7.142737e-01   4 113026101 113026432 332 + 0.101 0.000 -12.797
ENSG00000145362 E020 0.0000000       4 113049522 113049548 27 +      
ENSG00000145362 E021 0.0000000       4 113049549 113049621 73 +      
ENSG00000145362 E022 0.0000000       4 113049622 113049649 28 +      
ENSG00000145362 E023 0.0000000       4 113049650 113049652 3 +      
ENSG00000145362 E024 0.0000000       4 113049653 113049655 3 +      
ENSG00000145362 E025 0.0000000       4 113049656 113049658 3 +      
ENSG00000145362 E026 0.0000000       4 113049659 113049675 17 +      
ENSG00000145362 E027 0.0000000       4 113049676 113049728 53 +      
ENSG00000145362 E028 0.0000000       4 113049729 113049761 33 +      
ENSG00000145362 E029 0.0000000       4 113049762 113049812 51 +      
ENSG00000145362 E030 0.0000000       4 113069910 113070150 241 +      
ENSG00000145362 E031 0.0000000       4 113113723 113113779 57 +      
ENSG00000145362 E032 0.0000000       4 113116697 113116893 197 +      
ENSG00000145362 E033 0.0000000       4 113116894 113116986 93 +      
ENSG00000145362 E034 0.1426347 0.032629211 7.145888e-01   4 113116987 113117418 432 + 0.101 0.000 -12.803
ENSG00000145362 E035 0.0000000       4 113141249 113141417 169 +      
ENSG00000145362 E036 0.0000000       4 113145632 113146003 372 +      
ENSG00000145362 E037 0.0000000       4 113149090 113149205 116 +      
ENSG00000145362 E038 0.2027342 0.032185260 3.339265e-01   4 113151080 113151124 45 + 0.000 0.145 12.702
ENSG00000145362 E039 0.0000000       4 113151125 113151208 84 +      
ENSG00000145362 E040 0.1779838 0.037483466 7.138474e-01   4 113174018 113174044 27 + 0.101 0.000 -12.785
ENSG00000145362 E041 5.2731299 0.007730257 8.967583e-01 9.501908e-01 4 113174416 113174442 27 + 0.795 0.790 -0.022
ENSG00000145362 E042 7.1843002 0.004053195 6.141413e-01 7.796323e-01 4 113174443 113174517 75 + 0.878 0.951 0.274
ENSG00000145362 E043 6.2685509 0.006344159 2.938086e-01 5.344415e-01 4 113196368 113196466 99 + 0.908 0.788 -0.463
ENSG00000145362 E044 8.2851921 0.003885776 1.554204e-02 8.012819e-02 4 113199011 113199109 99 + 1.061 0.789 -1.028
ENSG00000145362 E045 8.8564683 0.003325883 9.787239e-04 9.747234e-03 4 113232161 113232259 99 + 1.107 0.729 -1.438
ENSG00000145362 E046 14.0611083 0.002828473 3.350651e-02 1.374870e-01 4 113236987 113237172 186 + 1.237 1.053 -0.660
ENSG00000145362 E047 0.1779838 0.037483466 7.138474e-01   4 113237173 113237598 426 + 0.101 0.000 -12.785
ENSG00000145362 E048 0.0000000       4 113237599 113237622 24 +      
ENSG00000145362 E049 0.0000000       4 113237623 113238502 880 +      
ENSG00000145362 E050 0.0000000       4 113238503 113240180 1678 +      
ENSG00000145362 E051 0.0000000       4 113240181 113240484 304 +      
ENSG00000145362 E052 6.5163602 0.004354914 8.234496e-01 9.099235e-01 4 113240485 113240497 13 + 0.879 0.866 -0.049
ENSG00000145362 E053 10.3028718 0.003468438 7.884447e-01 8.896117e-01 4 113240498 113240583 86 + 1.051 1.038 -0.048
ENSG00000145362 E054 9.1392981 0.003987890 1.427808e-01 3.516165e-01 4 113242111 113242209 99 + 1.060 0.910 -0.556
ENSG00000145362 E055 0.0000000       4 113242210 113247152 4943 +      
ENSG00000145362 E056 0.0000000       4 113249698 113249763 66 +      
ENSG00000145362 E057 8.6235304 0.018447276 4.245008e-02 1.611310e-01 4 113249764 113249862 99 + 1.069 0.816 -0.950
ENSG00000145362 E058 16.9606202 0.003899800 2.956231e-02 1.260703e-01 4 113255735 113255932 198 + 1.315 1.136 -0.632
ENSG00000145362 E059 0.6412370 0.031737665 8.911798e-02   4 113255933 113257188 1256 + 0.312 0.000 -14.625
ENSG00000145362 E060 11.2086242 0.005864833 3.499390e-01 5.871978e-01 4 113258050 113258148 99 + 1.107 1.022 -0.309
ENSG00000145362 E061 9.9215701 0.019636125 3.066705e-01 5.473030e-01 4 113258313 113258411 99 + 1.080 0.967 -0.416
ENSG00000145362 E062 8.8113052 0.003884345 3.501494e-02 1.416209e-01 4 113264897 113264995 99 + 1.070 0.842 -0.856
ENSG00000145362 E063 0.0000000       4 113270075 113270239 165 +      
ENSG00000145362 E064 13.5862266 0.002378348 1.017079e-02 5.885126e-02 4 113274452 113274649 198 + 1.237 1.005 -0.836
ENSG00000145362 E065 10.3430637 0.003847391 2.624236e-03 2.111512e-02 4 113277837 113277935 99 + 1.142 0.817 -1.210
ENSG00000145362 E066 10.3925618 0.005081404 7.635482e-02 2.374409e-01 4 113278460 113278558 99 + 1.108 0.931 -0.651
ENSG00000145362 E067 17.8757035 0.002030386 8.703205e-02 2.583201e-01 4 113282675 113282872 198 + 1.321 1.195 -0.444
ENSG00000145362 E068 13.7241609 0.061639838 3.807994e-01 6.128575e-01 4 113287605 113287703 99 + 1.218 1.077 -0.505
ENSG00000145362 E069 11.5385421 0.025908840 4.791509e-01 6.865232e-01 4 113288388 113288486 99 + 1.131 1.050 -0.293
ENSG00000145362 E070 0.0000000       4 113290165 113292415 2251 +      
ENSG00000145362 E071 9.0221993 0.003482882 6.368931e-01 7.949718e-01 4 113292416 113292459 44 + 0.973 1.038 0.238
ENSG00000145362 E072 9.2143999 0.006426803 5.472825e-01 7.343353e-01 4 113292460 113292514 55 + 0.973 1.053 0.291
ENSG00000145362 E073 0.0000000       4 113292515 113292837 323 +      
ENSG00000145362 E074 0.0000000       4 113292838 113292859 22 +      
ENSG00000145362 E075 0.0000000       4 113292860 113292924 65 +      
ENSG00000145362 E076 0.0000000       4 113292925 113292946 22 +      
ENSG00000145362 E077 0.0000000       4 113292947 113292981 35 +      
ENSG00000145362 E078 0.0000000       4 113292982 113293000 19 +      
ENSG00000145362 E079 0.0000000       4 113293001 113293097 97 +      
ENSG00000145362 E080 0.0000000       4 113293098 113293152 55 +      
ENSG00000145362 E081 0.0000000       4 113293153 113293299 147 +      
ENSG00000145362 E082 0.0000000       4 113293300 113293327 28 +      
ENSG00000145362 E083 0.0000000       4 113293328 113293337 10 +      
ENSG00000145362 E084 0.0000000       4 113293338 113293439 102 +      
ENSG00000145362 E085 12.0245496 0.010162115 8.324440e-01 9.151938e-01 4 113293440 113293538 99 + 1.099 1.134 0.127
ENSG00000145362 E086 12.6635737 0.004015339 8.966343e-01 9.501558e-01 4 113302767 113302839 73 + 1.134 1.136 0.007
ENSG00000145362 E087 0.0000000       4 113302840 113303731 892 +      
ENSG00000145362 E088 0.0000000       4 113304224 113304277 54 +      
ENSG00000145362 E089 18.4879788 0.009609186 4.277484e-01 6.493007e-01 4 113311255 113311399 145 + 1.311 1.254 -0.200
ENSG00000145362 E090 0.0000000       4 113311400 113312306 907 +      
ENSG00000145362 E091 0.0000000       4 113313684 113313695 12 +      
ENSG00000145362 E092 0.0000000       4 113316437 113316633 197 +      
ENSG00000145362 E093 0.1614157 0.034268687 7.142737e-01   4 113316634 113316869 236 + 0.101 0.000 -12.797
ENSG00000145362 E094 0.3337900 0.049725146 7.737257e-01   4 113316870 113317706 837 + 0.101 0.145 0.597
ENSG00000145362 E095 8.2245589 0.003735437 7.434964e-01 8.626805e-01 4 113317707 113317721 15 + 0.973 0.951 -0.083
ENSG00000145362 E096 14.6333710 0.002533842 7.410703e-01 8.611010e-01 4 113317722 113317809 88 + 1.189 1.173 -0.056
ENSG00000145362 E097 11.8664606 0.046500623 4.680596e-01 6.787513e-01 4 113318517 113318584 68 + 1.127 1.031 -0.348
ENSG00000145362 E098 8.8008923 0.003913325 2.788966e-02 1.209784e-01 4 113318585 113318620 36 + 1.061 0.817 -0.917
ENSG00000145362 E099 0.0000000       4 113318621 113319231 611 +      
ENSG00000145362 E100 0.0000000       4 113323759 113323794 36 +      
ENSG00000145362 E101 6.5796345 0.004870106 3.208323e-02 1.334592e-01 4 113330246 113330251 6 + 0.961 0.696 -1.037
ENSG00000145362 E102 22.9116328 0.003721789 2.673623e-01 5.069873e-01 4 113330252 113330470 219 + 1.391 1.320 -0.250
ENSG00000145362 E103 0.6316833 0.025215207 5.230133e-01   4 113330471 113331646 1176 + 0.252 0.145 -0.994
ENSG00000145362 E104 0.0000000       4 113331647 113331971 325 +      
ENSG00000145362 E105 0.1614157 0.034268687 7.142737e-01   4 113331972 113332070 99 + 0.101 0.000 -12.797
ENSG00000145362 E106 0.1723744 0.081106163 3.341565e-01   4 113332071 113332984 914 + 0.000 0.145 12.540
ENSG00000145362 E107 0.1723744 0.081106163 3.341565e-01   4 113332985 113333053 69 + 0.000 0.145 12.540
ENSG00000145362 E108 8.1729135 0.021278592 5.846628e-01 7.601028e-01 4 113333054 113333072 19 + 0.907 0.992 0.319
ENSG00000145362 E109 12.1130208 0.002549297 2.116884e-01 4.437504e-01 4 113333073 113333147 75 + 1.050 1.184 0.481
ENSG00000145362 E110 10.2335312 0.012821220 8.155319e-01 9.055582e-01 4 113333148 113333208 61 + 1.039 1.080 0.149
ENSG00000145362 E111 0.0000000       4 113335825 113335845 21 +      
ENSG00000145362 E112 16.0887735 0.002330677 7.629644e-01 8.744021e-01 4 113335846 113336057 212 + 1.237 1.226 -0.038
ENSG00000145362 E113 0.0000000       4 113336344 113336466 123 +      
ENSG00000145362 E114 15.0675383 0.002118692 8.618817e-01 9.313279e-01 4 113336577 113336781 205 + 1.196 1.195 -0.002
ENSG00000145362 E115 11.9117146 0.002804130 6.695504e-01 8.159908e-01 4 113339226 113339322 97 + 1.080 1.136 0.204
ENSG00000145362 E116 0.0000000       4 113339323 113340505 1183 +      
ENSG00000145362 E117 9.5137717 0.012403772 3.948796e-01 6.242338e-01 4 113341688 113341711 24 + 0.972 1.082 0.404
ENSG00000145362 E118 20.6238606 0.002547450 9.250510e-01 9.648255e-01 4 113341712 113341916 205 + 1.326 1.335 0.029
ENSG00000145362 E119 14.1042076 0.002619546 9.994129e-01 1.000000e+00 4 113343017 113343142 126 + 1.158 1.173 0.053
ENSG00000145362 E120 0.0000000       4 113343143 113345899 2757 +      
ENSG00000145362 E121 15.5113766 0.002504791 7.355567e-01 8.576402e-01 4 113345900 113346022 123 + 1.210 1.195 -0.052
ENSG00000145362 E122 0.8794403 0.660895438 6.007702e-01   4 113346023 113347792 1770 + 0.189 0.388 1.406
ENSG00000145362 E123 0.0000000       4 113347796 113347864 69 +      
ENSG00000145362 E124 0.3337900 0.049725146 7.737257e-01   4 113347865 113348275 411 + 0.101 0.145 0.597
ENSG00000145362 E125 2.3409796 0.010066722 7.125188e-01 8.433494e-01 4 113348276 113348308 33 + 0.527 0.475 -0.250
ENSG00000145362 E126 9.4283422 0.017086245 5.950978e-01 7.670919e-01 4 113350228 113350249 22 + 1.019 0.973 -0.171
ENSG00000145362 E127 0.8815333 0.042279805 3.426765e-01   4 113350250 113351700 1451 + 0.312 0.145 -1.405
ENSG00000145362 E128 11.5949146 0.041687556 6.370302e-01 7.950573e-01 4 113353045 113357693 4649 + 1.110 1.044 -0.239
ENSG00000145362 E129 2.5479655 0.009027313 4.547933e-01 6.693332e-01 4 113357694 113358807 1114 + 0.491 0.620 0.597
ENSG00000145362 E130 1.6708740 0.020880584 3.753819e-01 6.084805e-01 4 113358808 113359299 492 + 0.364 0.527 0.852
ENSG00000145362 E131 0.1779838 0.037483466 7.138474e-01   4 113359300 113359642 343 + 0.101 0.000 -12.785
ENSG00000145362 E132 0.2735028 0.025576221 7.839422e-01   4 113359643 113359978 336 + 0.101 0.145 0.594
ENSG00000145362 E133 1.4393099 0.013713283 3.848214e-01 6.163503e-01 4 113359979 113360822 844 + 0.312 0.474 0.916
ENSG00000145362 E134 14.8727514 0.004465823 3.991951e-01 6.275711e-01 4 113360823 113360897 75 + 1.210 1.149 -0.216
ENSG00000145362 E135 17.4666784 0.002039373 5.718701e-01 7.516065e-01 4 113363338 113363469 132 + 1.269 1.237 -0.113
ENSG00000145362 E136 0.0000000       4 113364696 113365038 343 +      
ENSG00000145362 E137 19.3020024 0.002679346 5.703457e-01 7.504867e-01 4 113365039 113365182 144 + 1.316 1.284 -0.110
ENSG00000145362 E138 0.0000000       4 113366428 113366429 2 +      
ENSG00000145362 E139 0.6648197 0.567767061 7.579485e-01   4 113366430 113367565 1136 + 0.260 0.141 -1.097
ENSG00000145362 E140 30.7389888 0.001147882 8.471698e-01 9.234127e-01 4 113367566 113367851 286 + 1.490 1.493 0.011
ENSG00000145362 E141 28.2809174 0.001235836 6.796853e-01 8.225032e-01 4 113369514 113369701 188 + 1.439 1.482 0.147
ENSG00000145362 E142 22.9031425 0.001685160 2.578375e-01 4.966050e-01 4 113369702 113369805 104 + 1.332 1.428 0.333
ENSG00000145362 E143 0.1723744 0.081106163 3.341565e-01   4 113369806 113370676 871 + 0.000 0.145 12.540
ENSG00000145362 E144 0.4397201 0.064388365 3.947449e-01   4 113370677 113372532 1856 + 0.101 0.252 1.580
ENSG00000145362 E145 0.5067846 0.021768165 8.216451e-01   4 113372533 113372625 93 + 0.183 0.145 -0.401
ENSG00000145362 E146 0.3150090 0.037922623 7.737031e-01   4 113372626 113373089 464 + 0.101 0.145 0.599
ENSG00000145362 E147 19.3199466 0.001723405 6.977606e-01 8.340866e-01 4 113373090 113373173 84 + 1.281 1.327 0.160
ENSG00000145362 E148 14.8795053 0.017506605 4.182476e-01 6.423112e-01 4 113373285 113373316 32 + 1.151 1.262 0.393
ENSG00000145362 E149 15.8384261 0.002583179 6.012366e-02 2.030987e-01 4 113373317 113373358 42 + 1.142 1.318 0.623
ENSG00000145362 E150 20.3092470 0.029598020 9.288631e-02 2.690953e-01 4 113373359 113373449 91 + 1.225 1.436 0.737
ENSG00000145362 E151 0.3040503 0.027442404 3.377505e-01   4 113373450 113374731 1282 + 0.183 0.000 -13.754
ENSG00000145362 E152 0.0000000       4 113374732 113374763 32 +      
ENSG00000145362 E153 15.2637738 0.004020871 2.644055e-01 5.036243e-01 4 113374764 113374946 183 + 1.150 1.266 0.411
ENSG00000145362 E154 0.1308682 0.032649190 3.357377e-01   4 113374947 113375667 721 + 0.000 0.145 12.695
ENSG00000145362 E155 0.0000000       4 113378090 113378181 92 +      
ENSG00000145362 E156 168.9879653 0.005054081 1.784269e-08 7.917687e-07 4 113381457 113384221 2765 + 2.110 2.344 0.781