ENSG00000137076

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000314888 ENSG00000137076 HEK293_OSMI2_6hA HEK293_TMG_6hB TLN1 protein_coding protein_coding 63.69919 104.9396 43.19724 19.40013 1.213397 -1.280351 24.397933 40.96895 15.031492 8.464051 0.6243874 -1.4459352 0.3846542 0.3895667 0.34810000 -0.04146667 7.664138e-01 6.985821e-16 FALSE TRUE
MSTRG.32632.3 ENSG00000137076 HEK293_OSMI2_6hA HEK293_TMG_6hB TLN1 protein_coding   63.69919 104.9396 43.19724 19.40013 1.213397 -1.280351 11.962922 15.42958 18.825867 2.037767 1.5134598 0.2868492 0.2454458 0.1583000 0.43450000 0.27620000 2.074159e-03 6.985821e-16 FALSE TRUE
MSTRG.32632.4 ENSG00000137076 HEK293_OSMI2_6hA HEK293_TMG_6hB TLN1 protein_coding   63.69919 104.9396 43.19724 19.40013 1.213397 -1.280351 0.847512 0.00000 3.388477 0.000000 0.8113333 8.4087447 0.0195125 0.0000000 0.07956667 0.07956667 6.985821e-16 6.985821e-16 FALSE TRUE
MSTRG.32632.5 ENSG00000137076 HEK293_OSMI2_6hA HEK293_TMG_6hB TLN1 protein_coding   63.69919 104.9396 43.19724 19.40013 1.213397 -1.280351 20.808388 39.81955 3.079561 10.636160 0.2661154 -3.6883652 0.2600875 0.3644000 0.07163333 -0.29276667 2.156847e-08 6.985821e-16 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000137076 E001 113.509722 0.0043634881 4.704717e-04 5.407575e-03 9 35696948 35697393 446 - 1.885 2.066 0.607
ENSG00000137076 E002 168.296602 0.0077553142 1.591451e-04 2.208409e-03 9 35697394 35697444 51 - 2.024 2.240 0.723
ENSG00000137076 E003 260.245703 0.0067944030 2.529438e-06 6.407470e-05 9 35697445 35697533 89 - 2.191 2.431 0.800
ENSG00000137076 E004 940.573718 0.0057005432 8.183765e-08 3.104292e-06 9 35697534 35697916 383 - 2.762 2.982 0.729
ENSG00000137076 E005 766.513107 0.0023250321 2.238245e-07 7.609273e-06 9 35698044 35698172 129 - 2.731 2.878 0.490
ENSG00000137076 E006 955.011617 0.0020834791 5.713614e-08 2.247633e-06 9 35698323 35698505 183 - 2.830 2.973 0.475
ENSG00000137076 E007 523.603285 0.0021757981 2.418962e-08 1.041306e-06 9 35698617 35698679 63 - 2.551 2.718 0.557
ENSG00000137076 E008 660.787349 0.0031728814 3.806751e-06 9.101419e-05 9 35698808 35698933 126 - 2.663 2.815 0.508
ENSG00000137076 E009 645.131472 0.0027780184 4.084818e-06 9.669584e-05 9 35699032 35699156 125 - 2.659 2.803 0.478
ENSG00000137076 E010 5.410164 0.0298067957 8.456714e-01 9.224919e-01 9 35699157 35699328 172 - 0.783 0.746 -0.148
ENSG00000137076 E011 683.298760 0.0032089383 3.292007e-04 4.028960e-03 9 35699356 35699461 106 - 2.705 2.821 0.386
ENSG00000137076 E012 677.816962 0.0017318637 4.462244e-08 1.799980e-06 9 35699974 35700081 108 - 2.682 2.824 0.474
ENSG00000137076 E013 814.092739 0.0005323691 1.501038e-09 8.483023e-08 9 35700191 35700376 186 - 2.788 2.899 0.367
ENSG00000137076 E014 2.521349 0.1562472336 3.050388e-01 5.456410e-01 9 35703559 35703559 1 - 0.654 0.431 -1.047
ENSG00000137076 E015 596.111348 0.0001314305 1.545217e-07 5.482937e-06 9 35703560 35703676 117 - 2.668 2.760 0.305
ENSG00000137076 E016 273.373448 0.0008762767 5.514771e-03 3.729432e-02 9 35703775 35703782 8 - 2.338 2.416 0.259
ENSG00000137076 E017 621.467811 0.0001127644 3.577409e-06 8.638224e-05 9 35703783 35703900 118 - 2.696 2.775 0.262
ENSG00000137076 E018 724.443928 0.0004208976 4.016478e-02 1.551263e-01 9 35703991 35704174 184 - 2.792 2.830 0.125
ENSG00000137076 E019 21.279742 0.1715937774 6.452473e-01 8.003645e-01 9 35704175 35704322 148 - 1.341 1.290 -0.178
ENSG00000137076 E020 14.255299 0.1206245635 8.763738e-01 9.394076e-01 9 35704323 35704331 9 - 1.150 1.140 -0.036
ENSG00000137076 E021 627.878083 0.0001265814 1.032256e-02 5.950673e-02 9 35704332 35704498 167 - 2.726 2.769 0.146
ENSG00000137076 E022 516.811184 0.0002195150 7.686594e-04 8.017199e-03 9 35704669 35704782 114 - 2.626 2.690 0.213
ENSG00000137076 E023 309.542263 0.0037953636 4.587439e-03 3.240626e-02 9 35704783 35704815 33 - 2.370 2.477 0.355
ENSG00000137076 E024 500.445005 0.0037082275 5.326124e-03 3.632275e-02 9 35705551 35705670 120 - 2.585 2.682 0.324
ENSG00000137076 E025 574.198193 0.0001262621 5.705865e-04 6.314658e-03 9 35705750 35705847 98 - 2.674 2.735 0.203
ENSG00000137076 E026 318.272734 0.0002264803 4.557997e-02 1.689739e-01 9 35705848 35705851 4 - 2.430 2.477 0.159
ENSG00000137076 E027 652.116930 0.0001029140 9.640036e-02 2.754475e-01 9 35705962 35706111 150 - 2.755 2.783 0.094
ENSG00000137076 E028 553.547608 0.0001248099 3.055864e-03 2.374868e-02 9 35706196 35706366 171 - 2.664 2.718 0.177
ENSG00000137076 E029 406.438459 0.0001409578 1.046974e-03 1.026976e-02 9 35706450 35706551 102 - 2.519 2.588 0.228
ENSG00000137076 E030 461.936009 0.0001510672 1.995166e-04 2.669656e-03 9 35706768 35706900 133 - 2.572 2.645 0.243
ENSG00000137076 E031 504.136373 0.0002283582 7.403997e-04 7.784121e-03 9 35707072 35707253 182 - 2.616 2.681 0.215
ENSG00000137076 E032 235.190317 0.0002709787 2.412271e-01 4.779591e-01 9 35707348 35707355 8 - 2.309 2.341 0.108
ENSG00000137076 E033 521.507857 0.0019565794 7.643100e-01 8.752296e-01 9 35707356 35707488 133 - 2.672 2.675 0.011
ENSG00000137076 E034 21.814492 0.0021003563 1.825271e-02 8.986154e-02 9 35707489 35707493 5 - 1.444 1.266 -0.620
ENSG00000137076 E035 358.778220 0.0005830852 1.380586e-01 3.445491e-01 9 35707731 35707769 39 - 2.538 2.503 -0.117
ENSG00000137076 E036 511.382333 0.0004310847 9.827138e-01 9.931093e-01 9 35707770 35707892 123 - 2.667 2.667 0.000
ENSG00000137076 E037 1.345744 0.0164862281 2.738598e-01   9 35707893 35707967 75 - 0.178 0.388 1.512
ENSG00000137076 E038 572.498684 0.0008543639 6.607887e-01 8.104371e-01 9 35708341 35708484 144 - 2.710 2.717 0.022
ENSG00000137076 E039 505.479867 0.0001376913 9.976858e-01 1.000000e+00 9 35710561 35710675 115 - 2.662 2.664 0.006
ENSG00000137076 E040 286.870975 0.0001874823 8.103370e-01 9.024155e-01 9 35710676 35710683 8 - 2.421 2.417 -0.012
ENSG00000137076 E041 1.898359 0.0100114899 7.368935e-01 8.585487e-01 9 35710684 35710741 58 - 0.480 0.422 -0.298
ENSG00000137076 E042 474.947517 0.0004419340 3.408393e-01 5.787830e-01 9 35710797 35710886 90 - 2.651 2.633 -0.060
ENSG00000137076 E043 481.404057 0.0001428499 1.517115e-01 3.648170e-01 9 35710989 35711082 94 - 2.661 2.637 -0.080
ENSG00000137076 E044 513.968658 0.0001725906 3.330499e-01 5.716722e-01 9 35711255 35711394 140 - 2.683 2.668 -0.051
ENSG00000137076 E045 588.949557 0.0001008200 7.201556e-01 8.483019e-01 9 35711595 35711792 198 - 2.733 2.730 -0.012
ENSG00000137076 E046 438.610560 0.0004422222 7.050679e-01 8.387691e-01 9 35712005 35712124 120 - 2.595 2.602 0.026
ENSG00000137076 E047 579.232725 0.0001540846 4.049109e-01 6.321954e-01 9 35712835 35713043 209 - 2.733 2.721 -0.040
ENSG00000137076 E048 410.796165 0.0012267950 1.497140e-01 3.618735e-01 9 35713196 35713298 103 - 2.599 2.564 -0.119
ENSG00000137076 E049 440.675012 0.0002109096 1.663684e-01 3.857331e-01 9 35713953 35714081 129 - 2.623 2.598 -0.083
ENSG00000137076 E050 403.452371 0.0028405849 3.011246e-01 5.415943e-01 9 35714239 35714373 135 - 2.590 2.554 -0.120
ENSG00000137076 E051 311.777679 0.0042266538 4.426054e-01 6.604520e-01 9 35714574 35714687 114 - 2.475 2.445 -0.102
ENSG00000137076 E052 260.987332 0.0004616039 1.240468e-01 3.221446e-01 9 35714760 35714876 117 - 2.349 2.392 0.143
ENSG00000137076 E053 318.246835 0.0014568253 1.403036e-01 3.479670e-01 9 35715059 35715187 129 - 2.493 2.452 -0.136
ENSG00000137076 E054 459.171271 0.0002045338 2.459919e-05 4.553142e-04 9 35716390 35716556 167 - 2.677 2.601 -0.254
ENSG00000137076 E055 611.826940 0.0025206872 2.503793e-05 4.619246e-04 9 35717146 35717440 295 - 2.830 2.706 -0.414
ENSG00000137076 E056 374.880926 0.0001918451 9.276441e-10 5.454823e-08 9 35717619 35717786 168 - 2.619 2.498 -0.405
ENSG00000137076 E057 237.646377 0.0004321564 3.350781e-02 1.374891e-01 9 35718812 35718910 99 - 2.378 2.323 -0.182
ENSG00000137076 E058 384.865564 0.0003948300 3.778787e-05 6.569666e-04 9 35719074 35719282 209 - 2.607 2.519 -0.291
ENSG00000137076 E059 312.187561 0.0008018806 4.398442e-04 5.127113e-03 9 35719519 35719627 109 - 2.517 2.426 -0.301
ENSG00000137076 E060 314.083035 0.0022122248 4.862381e-02 1.764222e-01 9 35719740 35719853 114 - 2.504 2.437 -0.223
ENSG00000137076 E061 407.646060 0.0034122247 3.714081e-03 2.755069e-02 9 35720039 35720219 181 - 2.642 2.536 -0.354
ENSG00000137076 E062 288.772307 0.0050921004 2.088015e-04 2.770907e-03 9 35720433 35720509 77 - 2.528 2.366 -0.540
ENSG00000137076 E063 358.598292 0.0048750550 8.754224e-06 1.870023e-04 9 35720812 35720913 102 - 2.635 2.451 -0.614
ENSG00000137076 E064 464.634560 0.0005786888 5.124375e-31 4.508999e-28 9 35721648 35721803 156 - 2.782 2.545 -0.788
ENSG00000137076 E065 373.417917 0.0009810297 2.063079e-26 1.216522e-23 9 35722119 35722223 105 - 2.699 2.441 -0.858
ENSG00000137076 E066 300.047419 0.0029668738 4.676444e-13 5.117263e-11 9 35722861 35722921 61 - 2.599 2.348 -0.837
ENSG00000137076 E067 7.709057 0.4503140882 1.654526e-01 3.845043e-01 9 35723104 35723951 848 - 1.128 0.757 -1.396
ENSG00000137076 E068 421.588166 0.0051553433 4.133566e-08 1.680571e-06 9 35723952 35724079 128 - 2.731 2.505 -0.750
ENSG00000137076 E069 449.781640 0.0034951367 3.717363e-12 3.470554e-10 9 35724192 35724334 143 - 2.769 2.528 -0.801
ENSG00000137076 E070 483.293945 0.0043068254 1.786466e-15 2.900411e-13 9 35724572 35724724 153 - 2.830 2.537 -0.976
ENSG00000137076 E071 425.787067 0.0045286725 4.076164e-13 4.506683e-11 9 35724830 35724959 130 - 2.766 2.489 -0.923
ENSG00000137076 E072 283.686571 0.0028182137 4.585740e-12 4.207262e-10 9 35725224 35725321 98 - 2.569 2.331 -0.794
ENSG00000137076 E073 250.330735 0.0003503306 9.204876e-14 1.154505e-11 9 35725565 35725727 163 - 2.483 2.302 -0.606
ENSG00000137076 E074 5.980218 0.0792505777 2.767550e-01 5.167434e-01 9 35726376 35726534 159 - 0.936 0.742 -0.755
ENSG00000137076 E075 127.726158 0.0157073954 7.033518e-02 2.254196e-01 9 35732075 35732373 299 - 2.158 2.024 -0.450