ENSG00000126777

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000395314 ENSG00000126777 HEK293_OSMI2_6hA HEK293_TMG_6hB KTN1 protein_coding protein_coding 49.59449 22.47255 86.94142 1.385671 2.086598 1.951404 9.335248 5.288768 10.0730824 0.7624810 0.80245139 0.9282079 0.1897500 0.23466667 0.115666667 -0.11900000 2.658944e-02 1.52569e-26 FALSE TRUE
ENST00000554507 ENSG00000126777 HEK293_OSMI2_6hA HEK293_TMG_6hB KTN1 protein_coding protein_coding 49.59449 22.47255 86.94142 1.385671 2.086598 1.951404 2.944299 7.154925 0.0000000 1.1881870 0.00000000 -9.4848078 0.1444875 0.32103333 0.000000000 -0.32103333 1.525690e-26 1.52569e-26 FALSE TRUE
ENST00000555573 ENSG00000126777 HEK293_OSMI2_6hA HEK293_TMG_6hB KTN1 protein_coding protein_coding 49.59449 22.47255 86.94142 1.385671 2.086598 1.951404 1.511929 1.577868 0.2605219 0.8210611 0.08060312 -2.5532733 0.0789875 0.06706667 0.003033333 -0.06403333 5.081283e-01 1.52569e-26 FALSE TRUE
MSTRG.9606.13 ENSG00000126777 HEK293_OSMI2_6hA HEK293_TMG_6hB KTN1 protein_coding   49.59449 22.47255 86.94142 1.385671 2.086598 1.951404 13.753200 2.932532 34.8478174 0.9548176 1.80368397 3.5663525 0.1995792 0.13210000 0.400300000 0.26820000 3.004871e-02 1.52569e-26 FALSE TRUE
MSTRG.9606.23 ENSG00000126777 HEK293_OSMI2_6hA HEK293_TMG_6hB KTN1 protein_coding   49.59449 22.47255 86.94142 1.385671 2.086598 1.951404 11.911216 3.147160 26.9813958 1.5770667 1.47832040 3.0958005 0.2117708 0.13893333 0.310000000 0.17106667 7.334277e-01 1.52569e-26 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000126777 E001 0.0000000       14 55559072 55559150 79 +      
ENSG00000126777 E002 0.0000000       14 55580186 55580186 1 +      
ENSG00000126777 E003 0.0000000       14 55580187 55580200 14 +      
ENSG00000126777 E004 0.0000000       14 55580201 55580206 6 +      
ENSG00000126777 E005 0.0000000       14 55580207 55580209 3 +      
ENSG00000126777 E006 0.5474829 0.0546430524 5.426961e-03   14 55580210 55580225 16 + 0.000 0.453 12.607
ENSG00000126777 E007 4.4356551 0.0064024326 6.608212e-06 1.467538e-04 14 55580226 55580253 28 + 0.433 1.056 2.601
ENSG00000126777 E008 4.8255351 0.0060284119 3.656239e-02 1.457438e-01 14 55580254 55580258 5 + 0.628 0.919 1.171
ENSG00000126777 E009 26.6710153 0.0013212330 2.745310e-02 1.196601e-01 14 55580259 55580308 50 + 1.329 1.489 0.553
ENSG00000126777 E010 27.9216087 0.0013037603 3.989464e-01 6.273464e-01 14 55580309 55580314 6 + 1.375 1.434 0.204
ENSG00000126777 E011 29.6931314 0.0012402001 5.599828e-01 7.432896e-01 14 55580315 55580321 7 + 1.405 1.444 0.132
ENSG00000126777 E012 29.9784007 0.0012500123 6.118279e-01 7.780915e-01 14 55580322 55580323 2 + 1.411 1.444 0.112
ENSG00000126777 E013 35.9389186 0.0009738543 7.618398e-01 8.737442e-01 14 55580324 55580354 31 + 1.490 1.506 0.054
ENSG00000126777 E014 1.0113563 0.3895873014 5.578284e-01   14 55580996 55581093 98 + 0.223 0.358 0.929
ENSG00000126777 E015 0.0000000       14 55598442 55598493 52 +      
ENSG00000126777 E016 9.3021529 0.0034141660 8.591229e-01 9.298841e-01 14 55601757 55601791 35 + 0.947 0.920 -0.103
ENSG00000126777 E017 20.6907716 0.0019196494 5.284957e-01 7.209763e-01 14 55601792 55601880 89 + 1.273 1.210 -0.223
ENSG00000126777 E018 0.0000000       14 55607346 55607460 115 +      
ENSG00000126777 E019 0.0000000       14 55611977 55612018 42 +      
ENSG00000126777 E020 39.9638934 0.0009405204 7.078930e-01 8.404940e-01 14 55612019 55612027 9 + 1.533 1.553 0.067
ENSG00000126777 E021 252.6505121 0.0002245496 5.761470e-04 6.365016e-03 14 55612028 55612309 282 + 2.348 2.245 -0.343
ENSG00000126777 E022 400.1337975 0.0289198472 7.736001e-03 4.807344e-02 14 55612310 55612571 262 + 2.564 2.351 -0.712
ENSG00000126777 E023 337.7369865 0.0045106995 2.355064e-07 7.959087e-06 14 55616517 55616654 138 + 2.492 2.270 -0.740
ENSG00000126777 E024 378.7818331 0.0001718092 1.276082e-11 1.079223e-09 14 55617964 55618134 171 + 2.534 2.367 -0.557
ENSG00000126777 E025 338.1092856 0.0134323332 1.731763e-02 8.661517e-02 14 55619182 55619312 131 + 2.480 2.339 -0.472
ENSG00000126777 E026 362.0313821 0.0062064106 1.084423e-03 1.056144e-02 14 55627912 55628028 117 + 2.511 2.363 -0.492
ENSG00000126777 E027 402.3155326 0.0044099206 5.840252e-05 9.521361e-04 14 55629957 55630097 141 + 2.559 2.398 -0.535
ENSG00000126777 E028 332.2406285 0.0001858376 1.433507e-08 6.496994e-07 14 55633235 55633341 107 + 2.474 2.326 -0.496
ENSG00000126777 E029 174.9211986 0.0002621667 3.828604e-05 6.639961e-04 14 55634526 55634529 4 + 2.196 2.049 -0.495
ENSG00000126777 E030 362.5032241 0.0001569493 7.113413e-13 7.493928e-11 14 55634530 55634658 129 + 2.517 2.336 -0.605
ENSG00000126777 E031 309.4120707 0.0012822293 9.947402e-07 2.828697e-05 14 55636449 55636536 88 + 2.443 2.284 -0.531
ENSG00000126777 E032 368.0585639 0.0002199999 9.705897e-10 5.683866e-08 14 55637198 55637358 161 + 2.519 2.364 -0.516
ENSG00000126777 E033 137.6013032 0.0100842639 1.491795e-01 3.610493e-01 14 55637359 55637364 6 + 2.084 1.990 -0.313
ENSG00000126777 E034 154.5902433 0.0036205208 3.509328e-01 5.881101e-01 14 55637779 55637793 15 + 2.124 2.075 -0.165
ENSG00000126777 E035 204.7497752 0.0004711338 1.054279e-02 6.042614e-02 14 55637794 55637847 54 + 2.254 2.166 -0.294
ENSG00000126777 E036 182.3280855 0.0002486888 3.515039e-03 2.643840e-02 14 55639185 55639222 38 + 2.206 2.104 -0.342
ENSG00000126777 E037 225.9519942 0.0065331376 1.435924e-02 7.572297e-02 14 55639913 55640003 91 + 2.303 2.182 -0.403
ENSG00000126777 E038 190.5169237 0.0061636179 4.035005e-03 2.936267e-02 14 55640374 55640442 69 + 2.234 2.089 -0.485
ENSG00000126777 E039 153.9481681 0.0003681237 7.227539e-05 1.140179e-03 14 55640933 55640970 38 + 2.143 1.990 -0.511
ENSG00000126777 E040 233.7223125 0.0008624148 2.744268e-05 4.990789e-04 14 55641127 55641208 82 + 2.321 2.179 -0.472
ENSG00000126777 E041 260.3095461 0.0007731146 1.814205e-03 1.579644e-02 14 55641692 55641748 57 + 2.360 2.260 -0.332
ENSG00000126777 E042 193.4890187 0.0013325314 1.412338e-03 1.298720e-02 14 55641749 55641760 12 + 2.235 2.113 -0.407
ENSG00000126777 E043 0.0000000       14 55644275 55644285 11 +      
ENSG00000126777 E044 0.0000000       14 55644286 55644443 158 +      
ENSG00000126777 E045 243.3379453 0.0013601013 7.247486e-03 4.580535e-02 14 55646973 55647007 35 + 2.329 2.235 -0.316
ENSG00000126777 E046 296.8297637 0.0002026220 1.404081e-03 1.293087e-02 14 55648025 55648088 64 + 2.414 2.326 -0.296
ENSG00000126777 E047 222.7431382 0.0003052041 2.935703e-01 5.342365e-01 14 55648089 55648115 27 + 2.281 2.245 -0.122
ENSG00000126777 E048 250.2551032 0.0002107884 7.621062e-01 8.739123e-01 14 55648802 55648870 69 + 2.326 2.312 -0.046
ENSG00000126777 E049 176.8356930 0.0017075255 1.126706e-01 3.036139e-01 14 55649776 55649813 38 + 2.185 2.117 -0.227
ENSG00000126777 E050 316.1757105 0.0005623704 8.545093e-01 9.273020e-01 14 55650328 55650418 91 + 2.426 2.415 -0.038
ENSG00000126777 E051 305.6309421 0.0002279286 2.505704e-01 4.886050e-01 14 55650569 55650637 69 + 2.405 2.428 0.076
ENSG00000126777 E052 2.4333056 0.0087147260 3.085888e-01 5.491457e-01 14 55651287 55651375 89 + 0.433 0.607 0.833
ENSG00000126777 E053 236.4216846 0.0003991612 1.494434e-02 7.788290e-02 14 55651890 55651927 38 + 2.283 2.345 0.208
ENSG00000126777 E054 387.7770070 0.0002533114 2.070343e-02 9.833087e-02 14 55652850 55652940 91 + 2.501 2.546 0.150
ENSG00000126777 E055 337.9555420 0.0001978427 1.380849e-01 3.445944e-01 14 55653017 55653085 69 + 2.444 2.473 0.096
ENSG00000126777 E056 278.9971327 0.0001945785 5.449121e-01 7.325903e-01 14 55653559 55653596 38 + 2.373 2.351 -0.071
ENSG00000126777 E057 303.7197006 0.0001930595 1.336347e-01 3.375061e-01 14 55656042 55656099 58 + 2.399 2.430 0.104
ENSG00000126777 E058 190.8386110 0.0018659831 3.679048e-01 6.023494e-01 14 55656100 55656101 2 + 2.200 2.226 0.088
ENSG00000126777 E059 248.5341879 0.0024295120 1.904191e-01 4.174902e-01 14 55656102 55656132 31 + 2.311 2.349 0.127
ENSG00000126777 E060 0.6434498 0.0193874923 3.683582e-01   14 55656133 55656347 215 + 0.226 0.000 -9.730
ENSG00000126777 E061 315.2419047 0.0036595045 9.011024e-02 2.639965e-01 14 55658546 55658614 69 + 2.409 2.462 0.175
ENSG00000126777 E062 240.9522333 0.0004719477 2.147639e-01 4.472220e-01 14 55659666 55659703 38 + 2.300 2.329 0.098
ENSG00000126777 E063 1.4593761 0.3111932330 1.870187e-01 4.130801e-01 14 55661249 55661273 25 + 0.230 0.554 1.888
ENSG00000126777 E064 1.9989371 0.8715105776 8.849021e-01 9.438401e-01 14 55661274 55661379 106 + 0.390 0.483 0.486
ENSG00000126777 E065 1.0643890 0.0153787590 6.773275e-01   14 55661380 55661521 142 + 0.268 0.345 0.508
ENSG00000126777 E066 320.1897513 0.0003980433 7.127696e-02 2.273182e-01 14 55661522 55661612 91 + 2.420 2.459 0.129
ENSG00000126777 E067 4.0708940 0.0063727411 1.819212e-01 4.064951e-01 14 55661613 55661857 245 + 0.693 0.451 -1.107
ENSG00000126777 E068 4.6952889 0.0753049901 6.632707e-01 8.119210e-01 14 55662905 55663196 292 + 0.708 0.609 -0.422
ENSG00000126777 E069 7.8172255 0.0431438581 7.626490e-02 2.372599e-01 14 55663343 55663954 612 + 0.935 0.608 -1.315
ENSG00000126777 E070 221.2420098 0.0035360402 2.658761e-01 5.052919e-01 14 55663955 55664041 87 + 2.260 2.295 0.117
ENSG00000126777 E071 344.0987751 0.0002560355 1.460275e-04 2.050845e-03 14 55667241 55667330 90 + 2.439 2.520 0.271
ENSG00000126777 E072 2.7968017 0.6572164936 7.969103e-01 8.945258e-01 14 55667651 55668803 1153 + 0.535 0.460 -0.369
ENSG00000126777 E073 395.0422919 0.0028815558 3.358319e-04 4.097188e-03 14 55670729 55670809 81 + 2.492 2.600 0.361
ENSG00000126777 E074 0.8489605 0.1632903238 1.000000e+00   14 55671315 55671565 251 + 0.228 0.207 -0.175
ENSG00000126777 E075 421.9827926 0.0014181791 1.776177e-05 3.456351e-04 14 55671566 55671655 90 + 2.521 2.628 0.356
ENSG00000126777 E076 7.5638392 0.0039330396 6.795835e-01 8.224513e-01 14 55671656 55671784 129 + 0.875 0.812 -0.243
ENSG00000126777 E077 449.9689821 0.0008269819 1.467007e-04 2.058768e-03 14 55671785 55671861 77 + 2.555 2.638 0.276
ENSG00000126777 E078 296.6657087 0.0010256563 2.683404e-03 2.147907e-02 14 55671862 55671877 16 + 2.376 2.455 0.265
ENSG00000126777 E079 4.4157601 0.0282163577 3.883691e-01 6.191579e-01 14 55671878 55672629 752 + 0.695 0.536 -0.697
ENSG00000126777 E080 433.2929070 0.0001513031 1.543107e-07 5.477739e-06 14 55672630 55672701 72 + 2.535 2.635 0.331
ENSG00000126777 E081 0.9335208 0.0157241448 7.737511e-01   14 55672702 55672928 227 + 0.268 0.206 -0.490
ENSG00000126777 E082 241.6171464 0.0002052770 7.394587e-05 1.162428e-03 14 55672929 55672929 1 + 2.284 2.384 0.333
ENSG00000126777 E083 455.8233470 0.0001330544 1.594394e-09 8.944989e-08 14 55672930 55673012 83 + 2.555 2.666 0.370
ENSG00000126777 E084 2.3681465 0.0148133654 5.537888e-01 7.389435e-01 14 55673013 55673171 159 + 0.433 0.537 0.511
ENSG00000126777 E085 187.7394445 0.0002584088 3.261109e-04 3.996041e-03 14 55673172 55673255 84 + 2.174 2.277 0.343
ENSG00000126777 E086 11.8651296 0.0027230184 3.514949e-01 5.886197e-01 14 55673256 55675049 1794 + 1.064 0.950 -0.422
ENSG00000126777 E087 7.5416092 0.0040209642 8.807174e-01 9.416188e-01 14 55675050 55675834 785 + 0.875 0.850 -0.094
ENSG00000126777 E088 414.9391907 0.0002704858 6.965168e-16 1.198425e-13 14 55675835 55675918 84 + 2.499 2.660 0.536
ENSG00000126777 E089 364.7550936 0.0009235843 4.826844e-10 2.978594e-08 14 55678352 55678444 93 + 2.446 2.597 0.502
ENSG00000126777 E090 1.2541393 0.0136968632 5.113281e-01   14 55678445 55679564 1120 + 0.342 0.206 -0.975
ENSG00000126777 E091 371.9429404 0.0006386696 1.138509e-06 3.178972e-05 14 55679565 55679662 98 + 2.466 2.577 0.368
ENSG00000126777 E092 273.5022350 0.0009275355 9.490905e-05 1.431161e-03 14 55679663 55679685 23 + 2.335 2.440 0.350
ENSG00000126777 E093 6.8812289 0.0170952063 4.874739e-02 1.766931e-01 14 55679686 55680664 979 + 0.876 0.537 -1.415
ENSG00000126777 E094 0.3337900 0.0290446587 3.478717e-01   14 55680665 55680685 21 + 0.069 0.207 1.835
ENSG00000126777 E095 7.7786972 0.0038701757 2.727117e-01 5.125317e-01 14 55680686 55680741 56 + 0.844 0.979 0.510
ENSG00000126777 E096 13.4580964 0.0299176525 7.012085e-01 8.363973e-01 14 55680742 55683723 2982 + 1.095 1.035 -0.220
ENSG00000126777 E097 455.7140006 0.0028956841 2.654627e-11 2.121491e-09 14 55684099 55684583 485 + 2.527 2.728 0.669
ENSG00000126777 E098 0.2735028 0.0262730311 3.472949e-01   14 55701344 55701526 183 + 0.068 0.206 1.832