ENSG00000115677

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000310931 ENSG00000115677 HEK293_OSMI2_6hA HEK293_TMG_6hB HDLBP protein_coding protein_coding 196.2823 207.6711 165.9915 38.14561 7.266891 -0.3231731 28.288861 35.658161 18.18222 6.6724502 0.4028795 -0.9713154 0.14259167 0.171300000 0.1098333 -0.061466667 1.673650e-03 1.256045e-13 FALSE TRUE
ENST00000391976 ENSG00000115677 HEK293_OSMI2_6hA HEK293_TMG_6hB HDLBP protein_coding protein_coding 196.2823 207.6711 165.9915 38.14561 7.266891 -0.3231731 105.559601 113.751669 84.93148 26.7581743 2.5917167 -0.4214733 0.53272917 0.535833333 0.5123333 -0.023500000 9.203588e-01 1.256045e-13 FALSE TRUE
MSTRG.20183.13 ENSG00000115677 HEK293_OSMI2_6hA HEK293_TMG_6hB HDLBP protein_coding   196.2823 207.6711 165.9915 38.14561 7.266891 -0.3231731 8.714496 1.470715 16.25765 0.1890022 1.2201842 3.4576394 0.04676667 0.007633333 0.0982000 0.090566667 1.256045e-13 1.256045e-13 FALSE TRUE
MSTRG.20183.9 ENSG00000115677 HEK293_OSMI2_6hA HEK293_TMG_6hB HDLBP protein_coding   196.2823 207.6711 165.9915 38.14561 7.266891 -0.3231731 31.773592 36.663777 30.38666 6.2007283 2.6902215 -0.2708359 0.16489167 0.177500000 0.1823333 0.004833333 9.722337e-01 1.256045e-13 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000115677 E001 0.5587019 3.285476e-01 4.446558e-01   2 241227264 241227266 3 - 0.257 0.104 -1.581
ENSG00000115677 E002 0.7366858 6.184215e-01 4.199256e-01   2 241227267 241227290 24 - 0.350 0.105 -2.175
ENSG00000115677 E003 1086.4571853 2.357259e-03 2.949557e-31 2.636330e-28 2 241227291 241229211 1921 - 2.806 3.126 1.065
ENSG00000115677 E004 117.1417446 1.623708e-03 6.464642e-11 4.756693e-09 2 241229212 241229223 12 - 1.881 2.151 0.907
ENSG00000115677 E005 1028.7958884 1.507764e-03 1.053821e-19 2.948321e-17 2 241229224 241229438 215 - 2.858 3.076 0.725
ENSG00000115677 E006 691.0949831 6.722776e-04 1.578312e-33 1.740478e-30 2 241229439 241229461 23 - 2.666 2.909 0.809
ENSG00000115677 E007 735.3291330 4.586828e-04 1.747450e-33 1.914563e-30 2 241229462 241229482 21 - 2.709 2.929 0.730
ENSG00000115677 E008 1703.5384055 5.555698e-04 5.599818e-40 9.232794e-37 2 241229483 241229687 205 - 3.085 3.290 0.681
ENSG00000115677 E009 9.7769195 8.187042e-03 1.866321e-01 4.126072e-01 2 241229688 241229832 145 - 0.929 1.081 0.560
ENSG00000115677 E010 1536.3549879 3.599263e-04 6.494322e-33 6.724910e-30 2 241229833 241229961 129 - 3.067 3.233 0.554
ENSG00000115677 E011 12.1835839 2.830631e-01 9.058985e-01 9.550672e-01 2 241229962 241230068 107 - 1.048 1.144 0.350
ENSG00000115677 E012 20.5952325 6.689061e-02 3.651616e-01 6.000891e-01 2 241230069 241230152 84 - 1.238 1.373 0.471
ENSG00000115677 E013 908.1409316 8.031393e-05 1.502164e-16 2.812590e-14 2 241230153 241230176 24 - 2.874 2.986 0.371
ENSG00000115677 E014 877.1500135 5.661888e-04 8.763623e-13 9.074785e-11 2 241230177 241230203 27 - 2.846 2.978 0.438
ENSG00000115677 E015 1211.8751736 6.209223e-04 1.256731e-12 1.262851e-10 2 241230204 241230269 66 - 2.991 3.117 0.417
ENSG00000115677 E016 1088.4797038 1.107041e-04 2.039572e-17 4.255112e-15 2 241230759 241230774 16 - 2.954 3.063 0.364
ENSG00000115677 E017 2154.2175230 1.230322e-04 3.609731e-29 2.712458e-26 2 241230775 241230944 170 - 3.248 3.361 0.377
ENSG00000115677 E018 10.8927574 1.652681e-01 9.669746e-02 2.759583e-01 2 241230945 241231343 399 - 0.791 1.172 1.419
ENSG00000115677 E019 1082.3288241 7.806728e-05 1.569971e-09 8.813790e-08 2 241233820 241233852 33 - 2.973 3.050 0.256
ENSG00000115677 E020 1601.1997414 1.557703e-04 1.052644e-17 2.297727e-15 2 241233853 241233963 111 - 3.128 3.229 0.335
ENSG00000115677 E021 1273.2869840 1.086238e-04 4.138614e-16 7.275692e-14 2 241235121 241235184 64 - 3.029 3.127 0.328
ENSG00000115677 E022 937.6966361 4.322580e-04 5.451680e-05 8.970261e-04 2 241235185 241235204 20 - 2.916 2.985 0.230
ENSG00000115677 E023 1120.7037533 3.000444e-04 9.466000e-08 3.531512e-06 2 241235205 241235255 51 - 2.988 3.067 0.264
ENSG00000115677 E024 9.3796420 1.582388e-01 9.788510e-01 9.912182e-01 2 241235256 241235275 20 - 0.990 1.011 0.078
ENSG00000115677 E025 12.4689937 2.697754e-01 6.323929e-01 7.918974e-01 2 241235276 241235489 214 - 1.145 1.098 -0.166
ENSG00000115677 E026 1490.5008808 1.236157e-04 7.207200e-08 2.769881e-06 2 241235490 241235594 105 - 3.120 3.184 0.213
ENSG00000115677 E027 7.9834747 1.543825e-01 5.543325e-01 7.393539e-01 2 241235595 241235629 35 - 0.847 0.983 0.516
ENSG00000115677 E028 10.1973123 3.126743e-01 8.756468e-01 9.390845e-01 2 241236108 241236614 507 - 0.972 1.082 0.404
ENSG00000115677 E029 1910.1348252 7.346684e-04 5.151271e-04 5.814972e-03 2 241236615 241236769 155 - 3.228 3.294 0.217
ENSG00000115677 E030 6.4551566 1.045296e-02 3.873081e-01 6.183845e-01 2 241236770 241236771 2 - 0.788 0.908 0.465
ENSG00000115677 E031 25.8020840 2.577736e-02 2.965322e-02 1.262991e-01 2 241238293 241238648 356 - 1.265 1.493 0.791
ENSG00000115677 E032 1043.3454788 1.583149e-03 2.880109e-02 1.237905e-01 2 241238649 241238678 30 - 2.969 3.029 0.202
ENSG00000115677 E033 1361.4802020 1.094533e-03 5.533386e-04 6.160326e-03 2 241238679 241238787 109 - 3.073 3.151 0.258
ENSG00000115677 E034 1769.9024586 9.439013e-04 4.209336e-03 3.031690e-02 2 241239602 241239810 209 - 3.198 3.260 0.206
ENSG00000115677 E035 613.4505546 3.110040e-03 8.296748e-01 9.135864e-01 2 241239811 241239820 10 - 2.763 2.786 0.078
ENSG00000115677 E036 1220.0818817 1.035619e-04 1.051981e-02 6.034366e-02 2 241239901 241239991 91 - 3.052 3.087 0.117
ENSG00000115677 E037 753.0658951 1.505968e-04 1.582177e-02 8.116213e-02 2 241239992 241240017 26 - 2.841 2.880 0.132
ENSG00000115677 E038 1146.2277577 9.004849e-05 1.336509e-01 3.375370e-01 2 241240018 241240122 105 - 3.034 3.056 0.075
ENSG00000115677 E039 6.8794420 4.081185e-03 2.416842e-01 4.784787e-01 2 241240123 241240164 42 - 0.968 0.832 -0.518
ENSG00000115677 E040 1541.8352369 6.548145e-05 3.375493e-02 1.382025e-01 2 241242460 241242678 219 - 3.159 3.185 0.088
ENSG00000115677 E041 6.7550206 4.829122e-03 6.103224e-01 7.771196e-01 2 241242679 241242790 112 - 0.909 0.849 -0.228
ENSG00000115677 E042 6.3946196 1.148602e-01 9.265540e-01 9.653622e-01 2 241243549 241243688 140 - 0.842 0.868 0.098
ENSG00000115677 E043 4.8309291 2.707135e-01 4.552276e-01 6.696764e-01 2 241246570 241246663 94 - 0.836 0.700 -0.546
ENSG00000115677 E044 6.3294151 6.788363e-02 3.328023e-01 5.714398e-01 2 241246664 241246751 88 - 0.949 0.781 -0.650
ENSG00000115677 E045 1359.3059542 8.507952e-04 6.230451e-01 7.858670e-01 2 241246752 241246883 132 - 3.110 3.129 0.064
ENSG00000115677 E046 1131.0370002 4.284770e-04 6.278356e-02 2.090033e-01 2 241247056 241247142 87 - 3.053 3.033 -0.066
ENSG00000115677 E047 3.0607803 4.144848e-01 8.675509e-01 9.345984e-01 2 241247143 241247417 275 - 0.625 0.574 -0.224
ENSG00000115677 E048 1296.8686816 6.105502e-05 5.282882e-08 2.095667e-06 2 241248003 241248116 114 - 3.131 3.079 -0.173
ENSG00000115677 E049 639.0775907 1.261102e-04 2.799659e-08 1.187725e-06 2 241248244 241248248 5 - 2.839 2.760 -0.261
ENSG00000115677 E050 1059.3213060 1.445534e-04 5.267774e-05 8.703076e-04 2 241248249 241248328 80 - 3.040 2.995 -0.149
ENSG00000115677 E051 686.5304353 1.321210e-03 3.568864e-02 1.434144e-01 2 241248329 241248348 20 - 2.852 2.810 -0.140
ENSG00000115677 E052 0.9232117 1.553646e-01 3.972568e-01   2 241249358 241249396 39 - 0.144 0.320 1.471
ENSG00000115677 E053 1298.6377384 2.678343e-04 1.762449e-04 2.405984e-03 2 241249841 241249980 140 - 3.127 3.085 -0.140
ENSG00000115677 E054 22.7737275 1.366127e-01 6.195431e-01 7.835269e-01 2 241249981 241250166 186 - 1.400 1.342 -0.202
ENSG00000115677 E055 57.1982486 2.004485e-01 3.173335e-01 5.573084e-01 2 241250167 241250996 830 - 1.840 1.690 -0.508
ENSG00000115677 E056 589.9496118 5.928455e-04 4.438617e-06 1.038693e-04 2 241252957 241252964 8 - 2.807 2.725 -0.271
ENSG00000115677 E057 728.8551911 1.626080e-04 1.203397e-07 4.381744e-06 2 241252965 241252999 35 - 2.892 2.820 -0.238
ENSG00000115677 E058 805.6185834 9.990411e-05 1.561939e-14 2.232770e-12 2 241253000 241253035 36 - 2.950 2.853 -0.323
ENSG00000115677 E059 1410.2772666 1.393849e-04 2.055882e-19 5.506878e-17 2 241253393 241253497 105 - 3.190 3.098 -0.309
ENSG00000115677 E060 1391.5516007 1.993564e-04 2.309868e-12 2.233876e-10 2 241255051 241255158 108 - 3.175 3.099 -0.253
ENSG00000115677 E061 16.8122726 2.729874e-01 4.028863e-01 6.306804e-01 2 241255159 241255327 169 - 1.318 1.185 -0.470
ENSG00000115677 E062 7.8163789 2.188966e-01 8.989220e-01 9.513275e-01 2 241255328 241255373 46 - 0.928 0.946 0.070
ENSG00000115677 E063 1403.4335195 1.025733e-03 1.199972e-07 4.370210e-06 2 241255374 241255511 138 - 3.187 3.098 -0.297
ENSG00000115677 E064 867.5761068 8.795005e-04 3.184443e-06 7.819428e-05 2 241255512 241255580 69 - 2.975 2.892 -0.275
ENSG00000115677 E065 1430.0302306 8.586142e-04 7.616153e-09 3.674426e-07 2 241256184 241256382 199 - 3.199 3.105 -0.312
ENSG00000115677 E066 514.7287075 1.585057e-03 7.000713e-06 1.538772e-04 2 241256383 241256393 11 - 2.765 2.656 -0.362
ENSG00000115677 E067 506.7992150 1.772136e-03 1.502903e-06 4.054447e-05 2 241256394 241256399 6 - 2.765 2.644 -0.403
ENSG00000115677 E068 1099.4508850 6.258991e-04 1.133646e-13 1.398106e-11 2 241256600 241256713 114 - 3.097 2.982 -0.382
ENSG00000115677 E069 788.6476192 1.064240e-04 3.283264e-24 1.536016e-21 2 241256714 241256764 51 - 2.961 2.829 -0.437
ENSG00000115677 E070 724.5773908 1.097926e-04 1.085317e-20 3.471033e-18 2 241256765 241256806 42 - 2.920 2.794 -0.418
ENSG00000115677 E071 533.6585201 1.822815e-04 6.252374e-14 8.074501e-12 2 241262711 241262719 9 - 2.783 2.664 -0.399
ENSG00000115677 E072 561.9581840 8.518867e-04 6.948463e-10 4.172591e-08 2 241262720 241262735 16 - 2.808 2.685 -0.409
ENSG00000115677 E073 698.3797734 4.165883e-04 8.241958e-14 1.044533e-11 2 241262736 241262781 46 - 2.899 2.780 -0.395
ENSG00000115677 E074 837.4622904 2.462659e-04 7.934499e-16 1.355594e-13 2 241262782 241262868 87 - 2.974 2.864 -0.365
ENSG00000115677 E075 488.6223029 1.454696e-04 1.776395e-11 1.465854e-09 2 241262869 241262870 2 - 2.739 2.631 -0.362
ENSG00000115677 E076 795.8166962 9.894691e-05 8.302500e-16 1.408547e-13 2 241262871 241262915 45 - 2.947 2.844 -0.341
ENSG00000115677 E077 597.6462989 1.016236e-04 3.124311e-11 2.459804e-09 2 241262916 241262916 1 - 2.819 2.724 -0.319
ENSG00000115677 E078 630.7481807 1.048391e-04 1.014893e-10 7.187329e-09 2 241262917 241262923 7 - 2.840 2.749 -0.304
ENSG00000115677 E079 594.0504150 1.081954e-04 2.606357e-09 1.395835e-07 2 241262924 241262926 3 - 2.811 2.725 -0.287
ENSG00000115677 E080 588.0314641 1.086524e-04 1.090358e-10 7.680129e-09 2 241264448 241264448 1 - 2.811 2.717 -0.314
ENSG00000115677 E081 718.8936050 9.366419e-05 2.497466e-13 2.885219e-11 2 241264449 241264474 26 - 2.900 2.803 -0.322
ENSG00000115677 E082 778.4402684 3.082246e-04 3.892943e-10 2.438625e-08 2 241264475 241264520 46 - 2.930 2.840 -0.299
ENSG00000115677 E083 626.7461115 1.382580e-04 4.652143e-18 1.085221e-15 2 241264521 241264541 21 - 2.857 2.731 -0.420
ENSG00000115677 E084 820.8791349 1.195324e-04 6.406987e-25 3.219094e-22 2 241264542 241264605 64 - 2.978 2.846 -0.441
ENSG00000115677 E085 0.2617363 1.635378e-01 3.855837e-01   2 241266537 241266627 91 - 0.000 0.181 9.639
ENSG00000115677 E086 500.2368198 8.675653e-04 6.748444e-11 4.946228e-09 2 241266794 241266811 18 - 2.765 2.630 -0.448
ENSG00000115677 E087 464.3772184 1.693560e-03 4.318210e-08 1.746363e-06 2 241266812 241266817 6 - 2.734 2.597 -0.457
ENSG00000115677 E088 482.9390185 1.530633e-03 3.250582e-08 1.355324e-06 2 241266818 241266826 9 - 2.749 2.616 -0.445
ENSG00000115677 E089 639.2466651 2.742168e-03 3.434035e-05 6.053332e-04 2 241266827 241266865 39 - 2.863 2.746 -0.389
ENSG00000115677 E090 649.6079988 5.179302e-03 1.370059e-02 7.315899e-02 2 241266866 241266906 41 - 2.856 2.765 -0.302
ENSG00000115677 E091 1.1324985 1.957038e-01 3.891012e-02   2 241267578 241267591 14 - 0.532 0.100 -3.209
ENSG00000115677 E092 2.3636524 2.287806e-02 4.603289e-02 1.701236e-01 2 241267592 241267708 117 - 0.695 0.364 -1.592
ENSG00000115677 E093 511.3938601 9.354421e-03 1.282814e-01 3.290883e-01 2 241268477 241268498 22 - 2.744 2.668 -0.253
ENSG00000115677 E094 538.2137293 2.633442e-02 7.472572e-01 8.650642e-01 2 241268499 241268541 43 - 2.743 2.708 -0.116
ENSG00000115677 E095 5.0726698 6.227926e-02 4.233089e-01 6.461025e-01 2 241268542 241268694 153 - 0.659 0.809 0.613
ENSG00000115677 E096 4.3669178 4.280601e-01 5.460348e-01 7.334552e-01 2 241268829 241268953 125 - 0.585 0.792 0.866
ENSG00000115677 E097 5.8902460 8.206516e-02 5.473137e-02 1.907415e-01 2 241268954 241268957 4 - 0.530 0.926 1.641
ENSG00000115677 E098 11.0862730 3.230354e-03 6.928826e-01 8.309686e-01 2 241268958 241269105 148 - 1.037 1.082 0.164
ENSG00000115677 E099 5.5676533 7.212530e-02 7.911873e-01 8.911377e-01 2 241269106 241269172 67 - 0.790 0.827 0.148
ENSG00000115677 E100 4.5853043 5.808208e-03 6.669854e-01 8.143434e-01 2 241269173 241269200 28 - 0.695 0.759 0.264
ENSG00000115677 E101 3.7377152 6.399123e-03 6.296314e-01 7.902694e-01 2 241269201 241269205 5 - 0.619 0.695 0.323
ENSG00000115677 E102 5.9463308 4.690078e-03 2.170426e-01 4.499194e-01 2 241269206 241269273 68 - 0.728 0.895 0.656
ENSG00000115677 E103 4.1356164 6.784742e-02 2.571661e-01 4.959203e-01 2 241269274 241269295 22 - 0.576 0.788 0.893
ENSG00000115677 E104 5.8842011 1.479882e-01 9.473461e-01 9.759772e-01 2 241269361 241269561 201 - 0.811 0.840 0.110
ENSG00000115677 E105 6.4994756 4.927526e-03 1.404924e-01 3.482626e-01 2 241271917 241271971 55 - 0.728 0.924 0.767
ENSG00000115677 E106 164.5743403 7.005218e-03 2.218759e-01 4.557670e-01 2 241272761 241272886 126 - 2.245 2.187 -0.193
ENSG00000115677 E107 0.0000000       2 241273036 241273117 82 -      
ENSG00000115677 E108 0.0000000       2 241302640 241302724 85 -      
ENSG00000115677 E109 51.2466818 5.336558e-01 1.717833e-01 3.929265e-01 2 241315102 241315292 191 - 1.464 1.816 1.199
ENSG00000115677 E110 285.3347053 3.678164e-01 5.327940e-01 7.240478e-01 2 241315570 241315820 251 - 2.422 2.463 0.137
ENSG00000115677 E111 0.3559677 5.191016e-01 2.167408e-01   2 241316871 241317061 191 - 0.259 0.000 -10.910