ENSG00000114867

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000346169 ENSG00000114867 HEK293_OSMI2_6hA HEK293_TMG_6hB EIF4G1 protein_coding protein_coding 308.1723 434.344 202.4575 78.51674 7.582729 -1.101181 50.90149 75.66675 52.193523 11.617293 3.887036 -0.5357029 0.17791667 0.17663333 0.25853333 0.08190000 1.507830e-01 1.957852e-25 FALSE TRUE
ENST00000350481 ENSG00000114867 HEK293_OSMI2_6hA HEK293_TMG_6hB EIF4G1 protein_coding protein_coding 308.1723 434.344 202.4575 78.51674 7.582729 -1.101181 21.06453 29.15254 5.105664 5.418462 1.845585 -2.5111231 0.06575417 0.06893333 0.02480000 -0.04413333 1.110190e-01 1.957852e-25 FALSE TRUE
ENST00000392537 ENSG00000114867 HEK293_OSMI2_6hA HEK293_TMG_6hB EIF4G1 protein_coding protein_coding 308.1723 434.344 202.4575 78.51674 7.582729 -1.101181 20.69700 27.13392 13.183402 6.391032 1.186345 -1.0408123 0.07227500 0.06096667 0.06576667 0.00480000 9.591749e-01 1.957852e-25 FALSE TRUE
ENST00000411531 ENSG00000114867 HEK293_OSMI2_6hA HEK293_TMG_6hB EIF4G1 protein_coding protein_coding 308.1723 434.344 202.4575 78.51674 7.582729 -1.101181 21.04710 21.46522 30.315832 4.829272 3.386097 0.4978742 0.08967500 0.05500000 0.14903333 0.09403333 1.232715e-01 1.957852e-25 FALSE TRUE
ENST00000441154 ENSG00000114867 HEK293_OSMI2_6hA HEK293_TMG_6hB EIF4G1 protein_coding protein_coding 308.1723 434.344 202.4575 78.51674 7.582729 -1.101181 76.95552 128.26953 51.881210 28.621299 1.032779 -1.3057289 0.23926250 0.28980000 0.25673333 -0.03306667 7.928636e-01 1.957852e-25 FALSE TRUE
ENST00000475721 ENSG00000114867 HEK293_OSMI2_6hA HEK293_TMG_6hB EIF4G1 protein_coding retained_intron 308.1723 434.344 202.4575 78.51674 7.582729 -1.101181 56.19198 81.51272 0.000000 27.354972 0.000000 -12.9929864 0.12885417 0.17456667 0.00000000 -0.17456667 1.957852e-25 1.957852e-25 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000114867 E001 0.1308682 3.264919e-02 1.000000e+00   3 184314493 184314494 2 + 0.000 0.084 10.317
ENSG00000114867 E002 0.1308682 3.264919e-02 1.000000e+00   3 184314495 184314501 7 + 0.000 0.084 10.326
ENSG00000114867 E003 1.3383013 4.704871e-02 2.134432e-01   3 184314502 184314527 26 + 0.172 0.429 1.791
ENSG00000114867 E004 5.4106486 5.582466e-03 4.172538e-02 1.592093e-01 3 184314528 184314540 13 + 0.536 0.857 1.347
ENSG00000114867 E005 6.9351160 9.005875e-03 1.587807e-02 8.134873e-02 3 184314541 184314541 1 + 0.593 0.958 1.469
ENSG00000114867 E006 14.8677010 2.458956e-03 2.888799e-06 7.193322e-05 3 184314542 184314549 8 + 0.731 1.282 2.049
ENSG00000114867 E007 15.4455438 2.182555e-03 1.230255e-06 3.400481e-05 3 184314550 184314550 1 + 0.731 1.296 2.100
ENSG00000114867 E008 17.5149215 2.163678e-03 2.914826e-06 7.253877e-05 3 184314551 184314551 1 + 0.835 1.341 1.839
ENSG00000114867 E009 24.3649426 3.091854e-03 6.662354e-06 1.476280e-04 3 184314552 184314561 10 + 1.050 1.467 1.468
ENSG00000114867 E010 25.0439139 1.915025e-03 4.701597e-06 1.091211e-04 3 184314562 184314566 5 + 1.069 1.477 1.436
ENSG00000114867 E011 24.9130457 1.743382e-03 5.249272e-06 1.201573e-04 3 184314567 184314567 1 + 1.069 1.474 1.426
ENSG00000114867 E012 25.4248196 1.741623e-03 1.820969e-05 3.528554e-04 3 184314568 184314568 1 + 1.103 1.477 1.311
ENSG00000114867 E013 131.7147607 5.026336e-04 5.939123e-01 7.662955e-01 3 184314569 184314605 37 + 2.099 2.088 -0.038
ENSG00000114867 E014 148.5203821 6.652969e-04 1.226767e-01 3.199946e-01 3 184314606 184314607 2 + 2.173 2.129 -0.147
ENSG00000114867 E015 156.2523170 4.459227e-04 7.488747e-02 2.345947e-01 3 184314608 184314612 5 + 2.198 2.149 -0.164
ENSG00000114867 E016 181.4542792 3.687389e-04 1.652188e-03 1.468772e-02 3 184314613 184314618 6 + 2.285 2.201 -0.280
ENSG00000114867 E017 328.8861678 2.524025e-03 5.536540e-04 6.162626e-03 3 184314619 184314653 35 + 2.556 2.447 -0.362
ENSG00000114867 E018 356.2729003 2.243121e-03 1.873476e-04 2.533317e-03 3 184314654 184314674 21 + 2.592 2.482 -0.367
ENSG00000114867 E019 9.6144560 4.713537e-03 5.196676e-01 7.147839e-01 3 184315164 184315165 2 + 0.944 1.025 0.301
ENSG00000114867 E020 73.0070146 2.101906e-02 2.181542e-01 4.512167e-01 3 184315166 184315407 242 + 1.903 1.801 -0.343
ENSG00000114867 E021 68.7855450 2.877405e-02 6.048239e-02 2.039130e-01 3 184315408 184315488 81 + 1.925 1.747 -0.602
ENSG00000114867 E022 401.6725386 6.714971e-03 5.186381e-04 5.844769e-03 3 184315489 184315545 57 + 2.671 2.515 -0.518
ENSG00000114867 E023 17.8370460 2.637257e-01 3.029123e-01 5.434801e-01 3 184315546 184315762 217 + 1.362 1.174 -0.660
ENSG00000114867 E024 417.5734115 3.711300e-03 1.161643e-02 6.487772e-02 3 184315763 184315856 94 + 2.646 2.557 -0.295
ENSG00000114867 E025 5.9656405 2.390920e-01 8.225662e-02 2.492251e-01 3 184315857 184316071 215 + 1.050 0.648 -1.570
ENSG00000114867 E026 34.1217844 4.799278e-02 4.077284e-01 6.342554e-01 3 184316072 184316131 60 + 1.576 1.478 -0.338
ENSG00000114867 E027 161.8191835 8.635099e-03 3.301556e-01 5.691029e-01 3 184316132 184316135 4 + 2.212 2.160 -0.175
ENSG00000114867 E028 328.3473494 1.992191e-03 1.220390e-02 6.726467e-02 3 184316136 184316191 56 + 2.533 2.459 -0.246
ENSG00000114867 E029 330.4223298 3.976459e-03 7.450462e-02 2.338263e-01 3 184316192 184316218 27 + 2.531 2.463 -0.225
ENSG00000114867 E030 3.3145786 2.779691e-02 3.705640e-02 1.470540e-01 3 184316713 184316733 21 + 0.804 0.467 -1.473
ENSG00000114867 E031 772.5000440 4.937066e-03 6.943433e-03 4.436901e-02 3 184317321 184317431 111 + 2.919 2.819 -0.332
ENSG00000114867 E032 843.8036301 4.637959e-03 3.222766e-03 2.474007e-02 3 184317432 184317497 66 + 2.962 2.855 -0.355
ENSG00000114867 E033 728.9622315 4.747203e-03 2.323830e-03 1.920906e-02 3 184317717 184317746 30 + 2.902 2.790 -0.375
ENSG00000114867 E034 601.8043811 3.792507e-03 3.854232e-03 2.833494e-02 3 184317747 184317749 3 + 2.811 2.711 -0.332
ENSG00000114867 E035 945.2422303 2.870501e-03 2.494105e-04 3.213630e-03 3 184317750 184317816 67 + 3.012 2.904 -0.358
ENSG00000114867 E036 4.5135644 4.421230e-01 3.197470e-01 5.594806e-01 3 184319199 184319243 45 + 0.805 0.659 -0.594
ENSG00000114867 E037 4.9721700 1.201537e-01 3.390183e-01 5.771073e-01 3 184319625 184319688 64 + 0.593 0.801 0.869
ENSG00000114867 E038 1035.1896342 2.936624e-03 1.040635e-04 1.546411e-03 3 184319689 184319756 68 + 3.055 2.941 -0.380
ENSG00000114867 E039 949.7631698 2.731990e-03 1.714481e-06 4.558046e-05 3 184319757 184319801 45 + 3.032 2.896 -0.452
ENSG00000114867 E040 4.9394816 1.214211e-01 8.398037e-01 9.192649e-01 3 184319802 184320296 495 + 0.768 0.737 -0.128
ENSG00000114867 E041 0.9408952 1.538664e-02 8.685077e-01   3 184320297 184320297 1 + 0.295 0.268 -0.187
ENSG00000114867 E042 0.3040503 2.744240e-02 5.717505e-02   3 184320298 184320312 15 + 0.295 0.000 -13.736
ENSG00000114867 E043 0.3040503 2.744240e-02 5.717505e-02   3 184320313 184320338 26 + 0.295 0.000 -13.736
ENSG00000114867 E044 0.3040503 2.744240e-02 5.717505e-02   3 184320339 184320445 107 + 0.295 0.000 -13.736
ENSG00000114867 E045 0.0000000       3 184320446 184320460 15 +      
ENSG00000114867 E046 0.0000000       3 184320461 184320484 24 +      
ENSG00000114867 E047 0.3337900 3.737539e-02 5.470248e-01   3 184320485 184320501 17 + 0.172 0.084 -1.186
ENSG00000114867 E048 0.3337900 3.737539e-02 5.470248e-01   3 184320502 184320537 36 + 0.172 0.084 -1.186
ENSG00000114867 E049 1.6657418 1.529685e-01 5.362065e-01 7.264591e-01 3 184320538 184320629 92 + 0.297 0.435 0.815
ENSG00000114867 E050 1330.2352008 2.019602e-04 1.486903e-13 1.787052e-11 3 184320630 184320722 93 + 3.147 3.061 -0.285
ENSG00000114867 E051 20.7982460 1.680018e-03 9.971515e-04 9.892467e-03 3 184320843 184320926 84 + 1.466 1.220 -0.856
ENSG00000114867 E052 1085.7721658 2.170600e-04 3.954463e-04 4.686384e-03 3 184320927 184320993 67 + 3.031 2.988 -0.141
ENSG00000114867 E053 1.7974178 3.735885e-02 6.947061e-01 8.321078e-01 3 184321254 184321281 28 + 0.470 0.398 -0.378
ENSG00000114867 E054 5901.6949117 5.361858e-04 1.374323e-13 1.663519e-11 3 184321282 184322103 822 + 3.792 3.706 -0.286
ENSG00000114867 E055 1832.8936680 8.868605e-05 3.610389e-14 4.866087e-12 3 184322362 184322450 89 + 3.275 3.207 -0.226
ENSG00000114867 E056 2841.6048854 1.230476e-04 5.250935e-12 4.766059e-10 3 184322544 184322730 187 + 3.456 3.401 -0.184
ENSG00000114867 E057 2237.0437044 8.776434e-05 7.948267e-18 1.773717e-15 3 184322821 184322954 134 + 3.364 3.292 -0.239
ENSG00000114867 E058 2130.0038887 4.471098e-05 8.355002e-06 1.795131e-04 3 184323083 184323218 136 + 3.316 3.284 -0.106
ENSG00000114867 E059 950.1934700 8.013386e-05 4.996716e-01 7.005110e-01 3 184323219 184323241 23 + 2.933 2.949 0.052
ENSG00000114867 E060 260.2171508 2.965737e-04 6.503310e-01 8.037807e-01 3 184323405 184323407 3 + 2.372 2.390 0.061
ENSG00000114867 E061 2165.3361112 6.221678e-05 4.246042e-01 6.469795e-01 3 184323408 184323593 186 + 3.302 3.301 -0.003
ENSG00000114867 E062 2761.8569323 4.080485e-04 4.225016e-03 3.040533e-02 3 184323780 184323977 198 + 3.426 3.395 -0.106
ENSG00000114867 E063 3078.5999499 7.315774e-04 1.352664e-04 1.924060e-03 3 184324201 184324347 147 + 3.487 3.434 -0.177
ENSG00000114867 E064 3527.8490989 5.939911e-04 2.378462e-03 1.955603e-02 3 184324878 184325103 226 + 3.536 3.499 -0.123
ENSG00000114867 E065 1278.7700717 2.810700e-04 3.047992e-03 2.369943e-02 3 184325104 184325114 11 + 3.095 3.060 -0.116
ENSG00000114867 E066 1476.2397067 2.002712e-04 3.370193e-03 2.559071e-02 3 184325269 184325298 30 + 3.154 3.124 -0.099
ENSG00000114867 E067 1798.0536409 1.199158e-04 6.102607e-01 7.770836e-01 3 184325299 184325373 75 + 3.219 3.219 0.000
ENSG00000114867 E068 5.8747544 4.731917e-03 2.944066e-01 5.349943e-01 3 184325374 184325479 106 + 0.690 0.844 0.620
ENSG00000114867 E069 2833.3713433 1.374922e-04 6.710401e-01 8.170090e-01 3 184325480 184325639 160 + 3.416 3.417 0.003
ENSG00000114867 E070 2460.1633553 4.400431e-05 2.133549e-01 4.456566e-01 3 184325851 184325951 101 + 3.345 3.362 0.056
ENSG00000114867 E071 1.9762095 1.273686e-02 5.023038e-02 1.802412e-01 3 184325952 184325957 6 + 0.644 0.316 -1.671
ENSG00000114867 E072 2898.8941516 1.056989e-04 1.428792e-03 1.310490e-02 3 184326527 184326629 103 + 3.403 3.436 0.110
ENSG00000114867 E073 2658.8281563 8.067364e-04 5.022160e-02 1.802249e-01 3 184326881 184326983 103 + 3.363 3.398 0.116
ENSG00000114867 E074 2364.4004143 6.894027e-04 1.747047e-03 1.534862e-02 3 184327216 184327285 70 + 3.300 3.352 0.173
ENSG00000114867 E075 2956.0779375 8.071011e-04 2.572936e-06 6.497304e-05 3 184327286 184327448 163 + 3.377 3.456 0.261
ENSG00000114867 E076 2082.5131547 6.631438e-04 2.654587e-06 6.673723e-05 3 184327586 184327704 119 + 3.227 3.304 0.256
ENSG00000114867 E077 6.7272649 6.016843e-02 4.256694e-02 1.614163e-01 3 184327705 184327829 125 + 1.052 0.725 -1.255
ENSG00000114867 E078 1811.2290888 3.082000e-04 7.608086e-04 7.950942e-03 3 184327830 184327948 119 + 3.189 3.237 0.160
ENSG00000114867 E079 1232.8334663 1.766553e-04 3.665713e-03 2.729142e-02 3 184327949 184328002 54 + 3.025 3.068 0.143
ENSG00000114867 E080 13.3974461 2.105120e-01 3.698246e-02 1.468555e-01 3 184328117 184328615 499 + 1.372 0.944 -1.533
ENSG00000114867 E081 5.3532863 1.185306e-01 3.401537e-01 5.780832e-01 3 184328616 184328630 15 + 0.891 0.708 -0.722
ENSG00000114867 E082 1419.8706122 4.366616e-04 1.482422e-03 1.349284e-02 3 184328631 184328668 38 + 3.079 3.131 0.172
ENSG00000114867 E083 2282.9209981 4.119820e-04 8.237024e-03 5.041396e-02 3 184328669 184328756 88 + 3.295 3.333 0.128
ENSG00000114867 E084 27.3767193 2.825569e-02 1.614398e-02 8.230864e-02 3 184328757 184328908 152 + 1.574 1.319 -0.878
ENSG00000114867 E085 2567.1749400 3.054289e-04 1.778518e-04 2.424362e-03 3 184328909 184328990 82 + 3.339 3.387 0.157
ENSG00000114867 E086 23.9296908 5.248188e-03 4.374354e-03 3.122860e-02 3 184328991 184329135 145 + 1.501 1.279 -0.770
ENSG00000114867 E087 2083.7872949 1.470776e-04 4.570699e-12 4.197998e-10 3 184331266 184331313 48 + 3.228 3.305 0.258
ENSG00000114867 E088 1842.9211134 6.967376e-04 2.200972e-13 2.568904e-11 3 184331314 184331364 51 + 3.141 3.263 0.405
ENSG00000114867 E089 20.8997983 1.173760e-01 9.336862e-01 9.689631e-01 3 184331365 184331471 107 + 1.269 1.318 0.170
ENSG00000114867 E090 2800.5451541 8.624434e-04 3.248413e-14 4.413243e-12 3 184331472 184331606 135 + 3.318 3.445 0.422
ENSG00000114867 E091 8.9184756 4.292193e-03 6.342453e-01 7.930992e-01 3 184331697 184331727 31 + 0.990 0.940 -0.187
ENSG00000114867 E092 2331.8559392 1.422248e-03 1.963351e-09 1.083595e-07 3 184331728 184331809 82 + 3.239 3.365 0.419
ENSG00000114867 E093 25.5935087 2.669358e-01 2.324059e-01 4.679750e-01 3 184331810 184331945 136 + 1.507 1.326 -0.624
ENSG00000114867 E094 3005.7916609 6.661521e-04 2.869128e-14 3.942103e-12 3 184331946 184332086 141 + 3.357 3.473 0.384
ENSG00000114867 E095 18.7428262 1.435100e-01 9.623729e-02 2.751445e-01 3 184332087 184332105 19 + 1.441 1.150 -1.018
ENSG00000114867 E096 4491.0288410 1.865517e-03 1.862055e-09 1.031376e-07 3 184334727 184335358 632 + 3.515 3.652 0.455