ENSG00000104763

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000381733 ENSG00000104763 HEK293_OSMI2_6hA HEK293_TMG_6hB ASAH1 protein_coding protein_coding 22.30036 8.274565 33.1189 1.092762 1.066968 1.999592 5.1870305 2.0613318 7.366863 0.4069542 0.6368658 1.832449 0.22843333 0.24423333 0.22180000 -0.02243333 8.922891e-01 7.794228e-06 FALSE TRUE
ENST00000520781 ENSG00000104763 HEK293_OSMI2_6hA HEK293_TMG_6hB ASAH1 protein_coding protein_coding 22.30036 8.274565 33.1189 1.092762 1.066968 1.999592 0.6497363 1.1771423 0.000000 0.5900075 0.0000000 -6.891349 0.03584583 0.12583333 0.00000000 -0.12583333 1.306615e-01 7.794228e-06 FALSE TRUE
ENST00000635998 ENSG00000104763 HEK293_OSMI2_6hA HEK293_TMG_6hB ASAH1 protein_coding nonsense_mediated_decay 22.30036 8.274565 33.1189 1.092762 1.066968 1.999592 2.7963934 0.2864428 5.104788 0.1432308 1.2771919 4.108849 0.09001667 0.03813333 0.15440000 0.11626667 4.003698e-01 7.794228e-06 TRUE TRUE
ENST00000636009 ENSG00000104763 HEK293_OSMI2_6hA HEK293_TMG_6hB ASAH1 protein_coding nonsense_mediated_decay 22.30036 8.274565 33.1189 1.092762 1.066968 1.999592 2.5089390 0.1483262 5.337378 0.1483262 0.8900877 5.077860 0.10532083 0.01533333 0.16053333 0.14520000 7.964046e-02 7.794228e-06 FALSE TRUE
ENST00000636997 ENSG00000104763 HEK293_OSMI2_6hA HEK293_TMG_6hB ASAH1 protein_coding protein_coding 22.30036 8.274565 33.1189 1.092762 1.066968 1.999592 1.5526329 0.0000000 2.117837 0.0000000 1.0608422 7.733244 0.04715000 0.00000000 0.06236667 0.06236667 4.572083e-01 7.794228e-06 FALSE TRUE
ENST00000637561 ENSG00000104763 HEK293_OSMI2_6hA HEK293_TMG_6hB ASAH1 protein_coding protein_coding 22.30036 8.274565 33.1189 1.092762 1.066968 1.999592 6.5254497 3.4739625 7.592580 0.4930875 0.3651442 1.125760 0.35595000 0.41886667 0.22906667 -0.18980000 7.794228e-06 7.794228e-06 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000104763 E001 0.1426347 0.0318554902 1.000000e+00   8 18055992 18056430 439 - 0.068 0.000 -9.072
ENSG00000104763 E002 1.0242381 0.0738397698 6.565267e-01   8 18056431 18056451 21 - 0.302 0.208 -0.711
ENSG00000104763 E003 1.8151243 0.0108647759 6.638400e-01 8.123076e-01 8 18056452 18056454 3 - 0.429 0.349 -0.454
ENSG00000104763 E004 2.1074081 0.0116216201 9.726177e-01 9.882499e-01 8 18056455 18056455 1 - 0.456 0.454 -0.008
ENSG00000104763 E005 2.5776758 0.0149189218 8.783837e-01 9.404992e-01 8 18056456 18056458 3 - 0.504 0.539 0.163
ENSG00000104763 E006 2.8865278 0.0331079441 7.093652e-01 8.413760e-01 8 18056459 18056461 3 - 0.527 0.607 0.367
ENSG00000104763 E007 3.3497809 0.0171233506 9.392130e-01 9.718964e-01 8 18056462 18056465 4 - 0.588 0.609 0.096
ENSG00000104763 E008 5.4632758 0.0051444053 8.822223e-01 9.424574e-01 8 18056466 18056469 4 - 0.745 0.773 0.112
ENSG00000104763 E009 5.8558803 0.0154491048 3.621759e-01 5.974801e-01 8 18056470 18056472 3 - 0.745 0.888 0.562
ENSG00000104763 E010 6.1952798 0.0168340516 4.683985e-01 6.789676e-01 8 18056473 18056474 2 - 0.771 0.888 0.457
ENSG00000104763 E011 6.1952798 0.0168340516 4.683985e-01 6.789676e-01 8 18056475 18056476 2 - 0.771 0.888 0.457
ENSG00000104763 E012 12.4782538 0.0029473777 4.692598e-01 6.795595e-01 8 18056477 18056487 11 - 1.040 1.124 0.305
ENSG00000104763 E013 13.1077243 0.0038448686 4.700294e-01 6.801030e-01 8 18056488 18056492 5 - 1.060 1.144 0.303
ENSG00000104763 E014 13.4283428 0.0038246049 5.435797e-01 7.316273e-01 8 18056493 18056502 10 - 1.072 1.144 0.257
ENSG00000104763 E015 23.4275761 0.0051248467 1.764289e-01 3.990051e-01 8 18056503 18056537 35 - 1.284 1.407 0.428
ENSG00000104763 E016 24.4098577 0.0017207640 1.505060e-01 3.630271e-01 8 18056538 18056545 8 - 1.299 1.419 0.417
ENSG00000104763 E017 25.2370731 0.0015900489 1.136763e-01 3.052815e-01 8 18056546 18056570 25 - 1.310 1.439 0.448
ENSG00000104763 E018 61.8874934 0.0009619489 2.623012e-01 5.014891e-01 8 18056571 18056707 137 - 1.704 1.770 0.222
ENSG00000104763 E019 48.9642583 0.0039793587 7.160522e-01 8.456337e-01 8 18056708 18056723 16 - 1.622 1.606 -0.055
ENSG00000104763 E020 60.3436883 0.0007245973 8.873667e-01 9.452517e-01 8 18056724 18056752 29 - 1.709 1.707 -0.006
ENSG00000104763 E021 53.5357614 0.0018617742 3.412799e-01 5.792301e-01 8 18056753 18056770 18 - 1.665 1.613 -0.176
ENSG00000104763 E022 48.9886869 0.0009168686 8.129921e-01 9.040267e-01 8 18056771 18056781 11 - 1.622 1.613 -0.028
ENSG00000104763 E023 53.7681716 0.0007455796 9.891395e-02 2.798861e-01 8 18056782 18056801 20 - 1.679 1.586 -0.315
ENSG00000104763 E024 45.9099241 0.0011135915 5.656308e-01 7.471095e-01 8 18056802 18056808 7 - 1.602 1.572 -0.101
ENSG00000104763 E025 52.1041563 0.0008171647 4.813542e-01 6.879852e-01 8 18056809 18056834 26 - 1.655 1.620 -0.121
ENSG00000104763 E026 49.3288200 0.0014371126 7.020145e-01 8.368480e-01 8 18056835 18056879 45 - 1.630 1.613 -0.059
ENSG00000104763 E027 42.2301892 0.0019365585 7.854803e-01 8.878205e-01 8 18056880 18056902 23 - 1.563 1.550 -0.045
ENSG00000104763 E028 36.2202649 0.0012528078 8.426235e-01 9.209173e-01 8 18056903 18056914 12 - 1.492 1.511 0.065
ENSG00000104763 E029 57.3154481 0.0227527640 7.528084e-01 8.684564e-01 8 18056915 18056998 84 - 1.692 1.671 -0.072
ENSG00000104763 E030 36.8983536 0.0235777191 8.703738e-01 9.361370e-01 8 18056999 18057047 49 - 1.505 1.489 -0.057
ENSG00000104763 E031 86.2119797 0.0006661181 7.051078e-01 8.387926e-01 8 18057048 18057197 150 - 1.856 1.878 0.076
ENSG00000104763 E032 93.0164689 0.0004892836 6.032266e-01 7.723669e-01 8 18057198 18057331 134 - 1.896 1.878 -0.059
ENSG00000104763 E033 72.3585032 0.0005272006 4.981152e-02 1.791773e-01 8 18057332 18057430 99 - 1.804 1.707 -0.326
ENSG00000104763 E034 149.2019448 0.0005229964 5.247469e-01 7.182971e-01 8 18057431 18057623 193 - 2.100 2.083 -0.057
ENSG00000104763 E035 1.2673108 0.0129821485 8.272270e-01   8 18057624 18058834 1211 - 0.304 0.349 0.283
ENSG00000104763 E036 103.8111291 0.0024246229 5.346367e-01 7.254151e-01 8 18058835 18058891 57 - 1.944 1.922 -0.075
ENSG00000104763 E037 0.3393995 0.0250822307 1.000000e+00   8 18058892 18059163 272 - 0.126 0.000 -12.546
ENSG00000104763 E038 136.1936747 0.0006950218 1.071544e-01 2.942545e-01 8 18059341 18059464 124 - 2.070 2.014 -0.187
ENSG00000104763 E039 87.9834713 0.0005093946 2.007329e-03 1.711557e-02 8 18059572 18059600 29 - 1.896 1.752 -0.485
ENSG00000104763 E040 120.7900996 0.0003996438 1.471144e-01 3.581901e-01 8 18059601 18059703 103 - 2.017 1.965 -0.174
ENSG00000104763 E041 1.1252237 0.4792149101 4.628719e-01   8 18059704 18061376 1673 - 0.221 0.462 1.515
ENSG00000104763 E042 69.8769793 0.0005359530 2.670411e-02 1.173769e-01 8 18061377 18061389 13 - 1.792 1.680 -0.379
ENSG00000104763 E043 68.4608708 0.0005868444 1.312114e-01 3.337185e-01 8 18061390 18061407 18 - 1.776 1.702 -0.252
ENSG00000104763 E044 79.3090239 0.0006005963 6.260194e-03 4.099980e-02 8 18061408 18061449 42 - 1.851 1.717 -0.450
ENSG00000104763 E045 56.8331797 0.0018552552 9.673104e-03 5.671773e-02 8 18061450 18061458 9 - 1.714 1.558 -0.532
ENSG00000104763 E046 1.5143843 0.1159841509 9.554474e-01 9.795936e-01 8 18061459 18061685 227 - 0.339 0.353 0.087
ENSG00000104763 E047 50.1181446 0.0008669167 1.183422e-02 6.577607e-02 8 18061686 18061686 1 - 1.659 1.503 -0.532
ENSG00000104763 E048 80.1826156 0.0033050125 2.273649e-02 1.050752e-01 8 18061687 18061740 54 - 1.853 1.727 -0.423
ENSG00000104763 E049 4.9746318 0.1126584740 3.350707e-01 5.736276e-01 8 18061741 18062247 507 - 0.656 0.859 0.821
ENSG00000104763 E050 1.4640757 0.0146281370 9.742240e-01 9.890165e-01 8 18062248 18062278 31 - 0.339 0.349 0.059
ENSG00000104763 E051 77.4953660 0.0008802793 1.428733e-01 3.517727e-01 8 18062279 18062335 57 - 1.826 1.757 -0.234
ENSG00000104763 E052 52.1223919 0.0007624310 2.033783e-01 4.337811e-01 8 18062336 18062339 4 - 1.659 1.587 -0.245
ENSG00000104763 E053 58.0520069 0.0007840350 8.196324e-02 2.486734e-01 8 18062340 18062352 13 - 1.710 1.614 -0.327
ENSG00000104763 E054 46.7909636 0.0030300267 4.759179e-01 6.841751e-01 8 18062353 18062354 2 - 1.610 1.565 -0.153
ENSG00000104763 E055 48.7629916 0.0056969484 5.782242e-01 7.559905e-01 8 18062355 18062367 13 - 1.626 1.587 -0.131
ENSG00000104763 E056 64.5157641 0.0006998885 2.563321e-02 1.141709e-01 8 18062368 18062393 26 - 1.759 1.639 -0.406
ENSG00000104763 E057 66.8176249 0.0015576755 4.632590e-03 3.264806e-02 8 18062394 18062423 30 - 1.781 1.620 -0.544
ENSG00000104763 E058 3.2429231 0.0074630605 4.590852e-01 6.725361e-01 8 18062424 18062931 508 - 0.588 0.455 -0.632
ENSG00000104763 E059 2.2864329 0.3756654005 6.368830e-01 7.949650e-01 8 18062932 18063074 143 - 0.433 0.540 0.529
ENSG00000104763 E060 2.5949089 0.0252178601 7.603785e-01 8.727696e-01 8 18063075 18063184 110 - 0.481 0.540 0.282
ENSG00000104763 E061 72.7373131 0.0005066907 1.869407e-03 1.619158e-02 8 18063185 18063230 46 - 1.817 1.657 -0.542
ENSG00000104763 E062 6.4155026 0.2492471285 6.284441e-01 7.895733e-01 8 18063231 18064122 892 - 0.810 0.738 -0.288
ENSG00000104763 E063 1.1965423 0.0153787590 6.716808e-01   8 18064123 18064234 112 - 0.266 0.349 0.548
ENSG00000104763 E064 0.2027342 0.0370870150 1.203876e-01   8 18064235 18064278 44 - 0.000 0.209 13.626
ENSG00000104763 E065 0.5481031 0.3407433586 1.532464e-01   8 18064279 18064412 134 - 0.067 0.359 2.947
ENSG00000104763 E066 0.2027342 0.0370870150 1.203876e-01   8 18064413 18064456 44 - 0.000 0.209 13.626
ENSG00000104763 E067 49.4441847 0.0009345257 8.996089e-05 1.367597e-03 8 18064457 18064468 12 - 1.668 1.409 -0.887
ENSG00000104763 E068 38.9219362 0.0012616991 1.959885e-04 2.630809e-03 8 18064469 18064471 3 - 1.570 1.290 -0.967
ENSG00000104763 E069 38.8938576 0.0033715789 2.118286e-04 2.805597e-03 8 18064472 18064474 3 - 1.570 1.275 -1.018
ENSG00000104763 E070 59.2434630 0.0032360231 1.900806e-04 2.564555e-03 8 18064475 18064531 57 - 1.740 1.494 -0.836
ENSG00000104763 E071 3.2256173 0.0604570229 7.961631e-01 8.940712e-01 8 18064532 18064724 193 - 0.565 0.610 0.201
ENSG00000104763 E072 8.0477736 0.0043980135 7.631455e-01 8.745034e-01 8 18064725 18065895 1171 - 0.880 0.924 0.167
ENSG00000104763 E073 1.9389077 0.0105155079 6.660436e-01 8.137200e-01 8 18065896 18066576 681 - 0.429 0.349 -0.453
ENSG00000104763 E074 2.1105462 0.1478401004 4.873693e-02 1.766628e-01 8 18066577 18066762 186 - 0.507 0.000 -14.801
ENSG00000104763 E075 0.8236465 0.4052057107 4.175896e-01   8 18066763 18066763 1 - 0.269 0.000 -13.094
ENSG00000104763 E076 0.8236465 0.4052057107 4.175896e-01   8 18066764 18066766 3 - 0.269 0.000 -13.094
ENSG00000104763 E077 14.9302045 0.0029314193 5.016493e-01 7.019858e-01 8 18066767 18066889 123 - 1.108 1.181 0.263
ENSG00000104763 E078 14.5495207 0.0027764352 3.048573e-02 1.287862e-01 8 18066890 18066901 12 - 1.060 1.276 0.771
ENSG00000104763 E079 69.4631779 0.0005544177 8.743197e-08 3.288874e-06 8 18066902 18067219 318 - 1.697 1.950 0.854
ENSG00000104763 E080 64.0727457 0.0010363799 2.913088e-01 5.318830e-01 8 18067220 18067221 2 - 1.716 1.776 0.202
ENSG00000104763 E081 77.6456555 0.0118060723 3.351983e-01 5.737616e-01 8 18067222 18067249 28 - 1.796 1.862 0.225
ENSG00000104763 E082 94.8335399 0.0005103443 9.583537e-02 2.744840e-01 8 18067250 18067298 49 - 1.880 1.956 0.255
ENSG00000104763 E083 1.7199652 0.0128210555 6.623797e-01 8.113655e-01 8 18067299 18068671 1373 - 0.371 0.455 0.457
ENSG00000104763 E084 0.3751086 0.0293458081 2.443224e-02   8 18069461 18069791 331 - 0.000 0.350 14.684
ENSG00000104763 E085 103.9204103 0.0004027364 5.947860e-02 2.016350e-01 8 18069792 18069872 81 - 1.920 2.001 0.272
ENSG00000104763 E086 57.1459345 0.0007594012 3.512557e-02 1.419162e-01 8 18069873 18069878 6 - 1.657 1.775 0.400
ENSG00000104763 E087 68.9944007 0.0011104878 1.466742e-03 1.338527e-02 8 18071300 18071308 9 - 1.724 1.886 0.545
ENSG00000104763 E088 70.4113340 0.0014729987 1.672027e-02 8.443312e-02 8 18071309 18071326 18 - 1.743 1.868 0.422
ENSG00000104763 E089 69.2543634 0.0041252097 7.855405e-02 2.418886e-01 8 18071327 18071330 4 - 1.743 1.846 0.346
ENSG00000104763 E090 103.8026768 0.0040095505 5.992099e-04 6.570648e-03 8 18071331 18071390 60 - 1.899 2.067 0.566
ENSG00000104763 E091 0.0000000       8 18071391 18071411 21 -      
ENSG00000104763 E092 0.5255656 0.3503101097 6.219352e-01   8 18073256 18073276 21 - 0.127 0.213 0.899
ENSG00000104763 E093 86.4087136 0.0050374251 1.866018e-04 2.524640e-03 8 18075541 18075580 40 - 1.811 2.011 0.673
ENSG00000104763 E094 53.2207471 0.0079838997 5.277056e-04 5.928114e-03 8 18075581 18075584 4 - 1.593 1.826 0.788
ENSG00000104763 E095 54.8190174 0.0023404410 6.558781e-05 1.050383e-03 8 18075585 18075587 3 - 1.607 1.834 0.768
ENSG00000104763 E096 0.9938080 0.0153787590 7.744692e-01   8 18075588 18075682 95 - 0.266 0.209 -0.453
ENSG00000104763 E097 0.1779838 0.0354310228 1.000000e+00   8 18075858 18075922 65 - 0.068 0.000 -11.548
ENSG00000104763 E098 1.3447864 0.0134441633 5.117407e-01   8 18075923 18076176 254 - 0.339 0.209 -0.938
ENSG00000104763 E099 1.3391769 0.0132224453 8.229641e-01   8 18076177 18076413 237 - 0.304 0.349 0.286
ENSG00000104763 E100 0.0000000       8 18076414 18076682 269 -      
ENSG00000104763 E101 0.5283420 0.3660428339 6.156140e-01   8 18082527 18082603 77 - 0.129 0.210 0.850
ENSG00000104763 E102 0.3641499 0.0350289937 3.477428e-01   8 18083122 18083408 287 - 0.068 0.209 1.872
ENSG00000104763 E103 0.3032425 0.0274424043 2.474286e-02   8 18083899 18083916 18 - 0.000 0.349 14.701
ENSG00000104763 E104 0.7547291 0.0172671820 6.850119e-02   8 18083917 18083940 24 - 0.126 0.454 2.451
ENSG00000104763 E105 0.9930002 0.0688167123 1.498897e-01   8 18083941 18083980 40 - 0.179 0.455 1.860
ENSG00000104763 E106 68.7932876 0.0005597490 4.317372e-05 7.345112e-04 8 18083981 18084286 306 - 1.714 1.912 0.668
ENSG00000104763 E107 1.1529431 0.4085832563 2.178374e-01   8 18084287 18084461 175 - 0.180 0.584 2.469
ENSG00000104763 E108 0.1426347 0.0318554902 1.000000e+00   8 18084462 18084586 125 - 0.068 0.000 -11.554
ENSG00000104763 E109 0.3040503 0.0274424043 1.000000e+00   8 18084587 18084671 85 - 0.126 0.000 -12.540
ENSG00000104763 E110 0.0000000       8 18084672 18084675 4 -      
ENSG00000104763 E111 11.1040873 0.4163320658 1.099743e-01 2.989764e-01 8 18084676 18084998 323 - 0.884 1.290 1.474