ENSG00000092148

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000553700 ENSG00000092148 HEK293_OSMI2_6hA HEK293_TMG_6hB HECTD1 protein_coding protein_coding 22.50355 14.56831 33.92106 3.357587 1.294678 1.218783 3.767118 0.5731303 8.6683635 0.5731303 0.53514126 3.8955329 0.1298333 0.0346000 0.2556667 0.22106667 0.129077879 0.002425326 FALSE TRUE
ENST00000692132 ENSG00000092148 HEK293_OSMI2_6hA HEK293_TMG_6hB HECTD1 protein_coding retained_intron 22.50355 14.56831 33.92106 3.357587 1.294678 1.218783 3.453703 4.6199420 3.0894930 1.9518322 0.40197146 -0.5789619 0.1999167 0.2781333 0.0907000 -0.18743333 0.227607406 0.002425326 FALSE TRUE
ENST00000693537 ENSG00000092148 HEK293_OSMI2_6hA HEK293_TMG_6hB HECTD1 protein_coding retained_intron 22.50355 14.56831 33.92106 3.357587 1.294678 1.218783 2.293966 3.4111741 0.3261261 0.7678156 0.20301705 -3.3474170 0.1519417 0.2348667 0.0093000 -0.22556667 0.002425326 0.002425326 FALSE TRUE
MSTRG.9323.16 ENSG00000092148 HEK293_OSMI2_6hA HEK293_TMG_6hB HECTD1 protein_coding   22.50355 14.56831 33.92106 3.357587 1.294678 1.218783 2.273811 0.4901989 4.0777945 0.2463189 0.08676994 3.0307487 0.0805125 0.0277000 0.1203667 0.09266667 0.253903792 0.002425326 FALSE TRUE
MSTRG.9323.24 ENSG00000092148 HEK293_OSMI2_6hA HEK293_TMG_6hB HECTD1 protein_coding   22.50355 14.56831 33.92106 3.357587 1.294678 1.218783 4.357809 2.3199866 7.4688569 0.5365046 0.35278564 1.6824961 0.1708792 0.1590000 0.2200333 0.06103333 0.149506422 0.002425326 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000092148 E001 0.1779838 0.0376474618 1.000000e+00   14 31100043 31100116 74 - 0.074 0.000 -7.856
ENSG00000092148 E002 0.1779838 0.0376474618 1.000000e+00   14 31100117 31100117 1 - 0.074 0.000 -10.434
ENSG00000092148 E003 0.6730019 0.0193874923 2.967557e-01   14 31100118 31100118 1 - 0.138 0.326 1.585
ENSG00000092148 E004 1.0066043 0.0153787590 3.691454e-02   14 31100119 31100119 1 - 0.138 0.510 2.586
ENSG00000092148 E005 1.6254760 0.0121114107 2.369854e-02 1.081667e-01 14 31100120 31100137 18 - 0.242 0.639 2.172
ENSG00000092148 E006 3.1742842 0.0151677932 7.584026e-03 4.741182e-02 14 31100138 31100146 9 - 0.427 0.854 1.878
ENSG00000092148 E007 21.4022887 0.0757999184 2.945521e-02 1.257459e-01 14 31100147 31100187 41 - 1.153 1.545 1.366
ENSG00000092148 E008 48.0744799 0.0595676633 3.568960e-02 1.434144e-01 14 31100188 31100252 65 - 1.513 1.859 1.177
ENSG00000092148 E009 234.6358547 0.0020798244 3.705710e-23 1.569364e-20 14 31100253 31100596 344 - 2.202 2.529 1.091
ENSG00000092148 E010 91.6044759 0.0014231941 5.033409e-06 1.157936e-04 14 31100597 31100632 36 - 1.849 2.053 0.686
ENSG00000092148 E011 353.4660419 0.0001697077 2.525672e-32 2.479291e-29 14 31100633 31101067 435 - 2.412 2.659 0.822
ENSG00000092148 E012 123.9570417 0.0006534239 1.251137e-10 8.690056e-09 14 31101180 31101223 44 - 1.963 2.198 0.786
ENSG00000092148 E013 172.3023539 0.0015630767 1.171661e-08 5.396661e-07 14 31101224 31101324 101 - 2.116 2.322 0.687
ENSG00000092148 E014 3.4860455 0.1720993033 4.754127e-01 6.837747e-01 14 31101325 31102189 865 - 0.566 0.689 0.536
ENSG00000092148 E015 1.0042192 0.3132362826 7.412173e-01   14 31102788 31102915 128 - 0.293 0.190 -0.811
ENSG00000092148 E016 201.9459679 0.0028355344 8.626320e-08 3.253270e-06 14 31102916 31103066 151 - 2.184 2.392 0.693
ENSG00000092148 E017 3.1924268 0.0223942009 5.994538e-01 7.698378e-01 14 31103067 31103703 637 - 0.600 0.509 -0.418
ENSG00000092148 E018 182.7560506 0.0002521811 3.339003e-06 8.140608e-05 14 31105383 31105476 94 - 2.163 2.306 0.476
ENSG00000092148 E019 1.5249831 0.0208618115 2.996158e-01 5.400418e-01 14 31105477 31105589 113 - 0.397 0.193 -1.414
ENSG00000092148 E020 144.6681628 0.0002884990 9.503337e-04 9.505744e-03 14 31105590 31105668 79 - 2.070 2.186 0.389
ENSG00000092148 E021 1.1987551 0.2220508051 7.592206e-01   14 31105669 31105942 274 - 0.288 0.331 0.279
ENSG00000092148 E022 424.6294981 0.0006453656 6.502784e-06 1.446963e-04 14 31106646 31107253 608 - 2.539 2.648 0.361
ENSG00000092148 E023 159.5510492 0.0028344019 7.458083e-04 7.826562e-03 14 31107567 31107704 138 - 2.102 2.246 0.484
ENSG00000092148 E024 0.6544085 0.0189318580 1.000000e+00   14 31109124 31109396 273 - 0.193 0.193 0.002
ENSG00000092148 E025 194.2906547 0.0025322213 3.338651e-03 2.541484e-02 14 31109397 31109598 202 - 2.195 2.313 0.395
ENSG00000092148 E026 132.1264521 0.0004874467 1.224942e-02 6.743681e-02 14 31112416 31112543 128 - 2.035 2.131 0.322
ENSG00000092148 E027 97.1890394 0.0004823520 4.152322e-01 6.399431e-01 14 31113104 31113189 86 - 1.920 1.962 0.141
ENSG00000092148 E028 137.9089461 0.0003351135 1.728240e-01 3.942439e-01 14 31113277 31113484 208 - 2.068 2.124 0.185
ENSG00000092148 E029 121.3905474 0.0004260006 5.267351e-02 1.859069e-01 14 31113877 31114059 183 - 2.006 2.085 0.266
ENSG00000092148 E030 0.9654734 0.0848810751 6.645384e-01   14 31114060 31114285 226 - 0.243 0.325 0.575
ENSG00000092148 E031 107.1926639 0.0041810999 9.901608e-01 9.968040e-01 14 31114286 31114340 55 - 1.970 1.979 0.031
ENSG00000092148 E032 5.1018685 0.0061116618 9.405508e-01 9.725421e-01 14 31114341 31115632 1292 - 0.723 0.739 0.066
ENSG00000092148 E033 128.8459520 0.0039788726 1.928623e-01 4.206312e-01 14 31116236 31116320 85 - 2.065 2.012 -0.177
ENSG00000092148 E034 161.0930880 0.0013395660 5.811744e-01 7.579197e-01 14 31116321 31116458 138 - 2.150 2.138 -0.040
ENSG00000092148 E035 0.1614157 0.0343089358 1.000000e+00   14 31116459 31116655 197 - 0.074 0.000 -10.465
ENSG00000092148 E036 91.6460467 0.0004270409 3.902459e-02 1.522504e-01 14 31119710 31119769 60 - 1.881 1.975 0.315
ENSG00000092148 E037 113.8261681 0.0035071075 8.003323e-02 2.449136e-01 14 31119770 31119866 97 - 1.976 2.060 0.279
ENSG00000092148 E038 115.6430415 0.0018226883 1.758873e-01 3.983159e-01 14 31121383 31121505 123 - 1.989 2.051 0.207
ENSG00000092148 E039 5.6466040 0.7594506717 4.601591e-01 6.732231e-01 14 31121506 31121643 138 - 0.777 0.754 -0.095
ENSG00000092148 E040 42.4959973 0.0010264159 9.284186e-01 9.662260e-01 14 31122914 31122919 6 - 1.576 1.579 0.008
ENSG00000092148 E041 119.9323824 0.0006116463 8.598741e-01 9.302718e-01 14 31122920 31123047 128 - 2.018 2.033 0.050
ENSG00000092148 E042 9.0812349 0.0911741353 8.081347e-01 9.010962e-01 14 31123048 31123515 468 - 0.944 0.973 0.108
ENSG00000092148 E043 5.1259693 0.0049985397 1.916370e-01 4.189488e-01 14 31123516 31123624 109 - 0.780 0.579 -0.846
ENSG00000092148 E044 3.0609951 0.0077577619 3.235741e-01 5.628981e-01 14 31123625 31123670 46 - 0.600 0.428 -0.828
ENSG00000092148 E045 11.9040222 0.0850552347 7.742211e-01 8.812783e-01 14 31126213 31127410 1198 - 1.070 1.000 -0.256
ENSG00000092148 E046 1.7886384 0.2162516897 7.285227e-01 8.533467e-01 14 31127411 31127518 108 - 0.428 0.328 -0.571
ENSG00000092148 E047 2.8560480 0.0076469082 1.366793e-01 3.424350e-01 14 31127519 31127784 266 - 0.600 0.326 -1.414
ENSG00000092148 E048 159.1236853 0.0015692518 5.980705e-01 7.689626e-01 14 31127785 31128006 222 - 2.150 2.137 -0.043
ENSG00000092148 E049 0.6487990 0.3615525872 3.558852e-01   14 31128007 31128371 365 - 0.136 0.330 1.622
ENSG00000092148 E050 0.3206185 0.0274424043 7.571292e-01   14 31128372 31128611 240 - 0.137 0.000 -11.522
ENSG00000092148 E051 285.4915846 0.0473034187 6.489375e-01 8.028127e-01 14 31128612 31129307 696 - 2.391 2.417 0.084
ENSG00000092148 E052 43.6528432 0.9314539734 6.214401e-01 7.848264e-01 14 31129308 31129448 141 - 1.586 1.608 0.073
ENSG00000092148 E053 1.5304025 0.1948519482 6.837285e-01 8.250986e-01 14 31129449 31131952 2504 - 0.358 0.427 0.384
ENSG00000092148 E054 128.6199296 0.0180697885 6.514425e-01 8.044577e-01 14 31133238 31133414 177 - 2.065 2.023 -0.141
ENSG00000092148 E055 145.9670331 0.0017672791 3.322385e-04 4.059703e-03 14 31133509 31133675 167 - 2.137 2.000 -0.461
ENSG00000092148 E056 83.3046507 0.0025914530 9.660536e-03 5.666164e-02 14 31134872 31134942 71 - 1.894 1.767 -0.428
ENSG00000092148 E057 140.0978335 0.0047298592 1.884687e-03 1.629484e-02 14 31134943 31135195 253 - 2.123 1.973 -0.503
ENSG00000092148 E058 65.0961828 0.0025136185 8.683158e-04 8.835760e-03 14 31135476 31135541 66 - 1.803 1.614 -0.637
ENSG00000092148 E059 65.3762749 0.0228720006 6.679985e-02 2.178802e-01 14 31135542 31135615 74 - 1.800 1.648 -0.516
ENSG00000092148 E060 94.9266795 0.0242699409 9.833161e-02 2.788460e-01 14 31136531 31136665 135 - 1.954 1.831 -0.414
ENSG00000092148 E061 0.6895701 0.0765085682 3.166433e-01   14 31136666 31136838 173 - 0.138 0.326 1.579
ENSG00000092148 E062 88.3001388 0.0006942415 1.220700e-02 6.727341e-02 14 31139892 31139997 106 - 1.920 1.814 -0.354
ENSG00000092148 E063 76.6910718 0.0004902657 4.910779e-05 8.190564e-04 14 31141858 31141952 95 - 1.875 1.681 -0.655
ENSG00000092148 E064 96.2481809 0.0005313999 2.255672e-06 5.799622e-05 14 31144111 31144257 147 - 1.974 1.768 -0.696
ENSG00000092148 E065 104.5455458 0.0005774191 2.997742e-11 2.371148e-09 14 31144807 31144941 135 - 2.024 1.729 -0.994
ENSG00000092148 E066 77.9793730 0.0005100977 1.123985e-08 5.208144e-07 14 31148721 31148797 77 - 1.897 1.609 -0.972
ENSG00000092148 E067 129.2113022 0.0004443048 4.821714e-13 5.255700e-11 14 31148897 31149160 264 - 2.115 1.829 -0.960
ENSG00000092148 E068 123.8418107 0.0004171138 7.455751e-14 9.505690e-12 14 31149999 31150221 223 - 2.097 1.792 -1.026
ENSG00000092148 E069 121.7401159 0.0004215781 4.303604e-13 4.733490e-11 14 31156840 31157010 171 - 2.089 1.792 -0.998
ENSG00000092148 E070 83.4835581 0.0105626366 2.075043e-04 2.756493e-03 14 31157165 31157303 139 - 1.924 1.657 -0.901
ENSG00000092148 E071 0.9113432 0.0166602257 6.626412e-01   14 31162593 31162619 27 - 0.242 0.326 0.587
ENSG00000092148 E072 86.0274138 0.0013241107 6.645552e-08 2.575462e-06 14 31168298 31168472 175 - 1.938 1.670 -0.907
ENSG00000092148 E073 0.3040503 0.0274424043 7.595800e-01   14 31169156 31169353 198 - 0.137 0.000 -11.521
ENSG00000092148 E074 73.7804043 0.0005548422 1.018920e-08 4.774724e-07 14 31169354 31169468 115 - 1.876 1.578 -1.006
ENSG00000092148 E075 60.2685644 0.0006169994 1.386391e-06 3.776120e-05 14 31171861 31171959 99 - 1.782 1.509 -0.929
ENSG00000092148 E076 53.6538083 0.0007153709 1.797766e-04 2.446330e-03 14 31172046 31172122 77 - 1.725 1.509 -0.736
ENSG00000092148 E077 1.7553641 0.0341979731 5.489179e-02 1.911009e-01 14 31172954 31173155 202 - 0.287 0.637 1.835
ENSG00000092148 E078 111.5990305 0.0026515404 4.300064e-07 1.356081e-05 14 31173156 31173377 222 - 2.041 1.802 -0.804
ENSG00000092148 E079 59.2794198 0.0006854461 7.761448e-08 2.960630e-06 14 31173378 31173426 49 - 1.784 1.470 -1.068
ENSG00000092148 E080 111.6691720 0.0060251854 5.722207e-07 1.747774e-05 14 31173525 31173806 282 - 2.050 1.758 -0.981
ENSG00000092148 E081 0.3393995 0.0274424043 7.560583e-01   14 31173807 31174910 1104 - 0.138 0.000 -11.523
ENSG00000092148 E082 66.9069653 0.0005738052 6.027592e-11 4.462178e-09 14 31174911 31175052 142 - 1.842 1.470 -1.265
ENSG00000092148 E083 54.5903927 0.0008381862 2.523457e-08 1.081901e-06 14 31175053 31175138 86 - 1.753 1.408 -1.178
ENSG00000092148 E084 52.7923950 0.0006721198 1.200524e-08 5.516141e-07 14 31178020 31178064 45 - 1.739 1.379 -1.231
ENSG00000092148 E085 90.2170387 0.0004602467 3.308550e-11 2.586869e-09 14 31178065 31178254 190 - 1.961 1.644 -1.072
ENSG00000092148 E086 0.4702677 0.0217681645 7.517371e-01   14 31185602 31185719 118 - 0.138 0.193 0.583
ENSG00000092148 E087 0.1426347 0.0330797868 1.000000e+00   14 31203071 31203636 566 - 0.074 0.000 -10.475
ENSG00000092148 E088 69.6154478 0.0006261738 4.718388e-06 1.094062e-04 14 31205797 31205957 161 - 1.841 1.603 -0.804
ENSG00000092148 E089 0.5885118 0.0696592849 2.994311e-01   14 31205958 31206176 219 - 0.137 0.325 1.589
ENSG00000092148 E090 34.0156472 0.0010540086 4.718057e-02 1.729669e-01 14 31207016 31207390 375 - 1.514 1.379 -0.465
ENSG00000092148 E091 36.4103195 0.0079808033 2.130663e-02 1.003427e-01 14 31207391 31207804 414 - 1.554 1.367 -0.641