• ENSG00000088448
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000088448

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000267339 ENSG00000088448 HEK293_OSMI2_6hA HEK293_TMG_6hB ANKRD10 protein_coding protein_coding 19.75645 12.41709 27.23457 1.125162 1.595239 1.13248 6.680458 3.7772871 9.467828 0.19747512 0.45756206 1.323392 0.33960417 0.30960000 0.34806667 0.03846667 8.356380e-01 6.114509e-05 FALSE TRUE
ENST00000310847 ENSG00000088448 HEK293_OSMI2_6hA HEK293_TMG_6hB ANKRD10 protein_coding protein_coding 19.75645 12.41709 27.23457 1.125162 1.595239 1.13248 3.723874 3.4857017 2.976673 0.08477913 0.10653518 -0.227043 0.21980417 0.28610000 0.10960000 -0.17650000 6.114509e-05 6.114509e-05 FALSE TRUE
ENST00000463156 ENSG00000088448 HEK293_OSMI2_6hA HEK293_TMG_6hB ANKRD10 protein_coding processed_transcript 19.75645 12.41709 27.23457 1.125162 1.595239 1.13248 1.912816 0.7969893 3.304223 0.45033273 0.08971367 2.038049 0.08738333 0.05903333 0.12250000 0.06346667 4.124022e-01 6.114509e-05   FALSE
ENST00000475809 ENSG00000088448 HEK293_OSMI2_6hA HEK293_TMG_6hB ANKRD10 protein_coding processed_transcript 19.75645 12.41709 27.23457 1.125162 1.595239 1.13248 2.678198 0.7471717 3.842143 0.41622500 0.18679299 2.346969 0.12087500 0.06590000 0.14250000 0.07660000 6.977072e-01 6.114509e-05   FALSE
MSTRG.9072.4 ENSG00000088448 HEK293_OSMI2_6hA HEK293_TMG_6hB ANKRD10 protein_coding   19.75645 12.41709 27.23457 1.125162 1.595239 1.13248 1.250726 0.6296234 2.479515 0.35666755 0.35373727 1.960570 0.05380000 0.05550000 0.09033333 0.03483333 7.843894e-01 6.114509e-05 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_6hBColumn filter
HEK293_OSMI2_6hAColumn filter
log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hBColumn filter
ENSG00000088448 E001 110.121878 1.097356904 0.469119232 0.67946707 13 110878540 110879357 818 - 2.003 2.088 0.285
ENSG00000088448 E002 48.368386 0.528128252 0.293488029 0.53417149 13 110879358 110879537 180 - 1.625 1.763 0.466
ENSG00000088448 E003 58.726855 0.669744391 0.509921672 0.70794408 13 110879538 110879726 189 - 1.769 1.775 0.019
ENSG00000088448 E004 36.364976 0.516639051 0.539241532 0.72844508 13 110879727 110879767 41 - 1.570 1.566 -0.014
ENSG00000088448 E005 41.640983 0.553997908 0.550402692 0.73661302 13 110879768 110879817 50 - 1.633 1.614 -0.066
ENSG00000088448 E006 34.966638 0.471876937 0.501026926 0.70151530 13 110879818 110879841 24 - 1.551 1.552 0.005
ENSG00000088448 E007 92.474398 0.833666965 0.588744840 0.76279947 13 110879842 110880112 271 - 1.984 1.938 -0.154
ENSG00000088448 E008 12.378810 0.288402321 0.820846215 0.90851870 13 110883195 110883552 358 - 1.199 0.998 -0.726
ENSG00000088448 E009 10.553700 0.233278778 0.840243671 0.91958356 13 110883553 110883697 145 - 1.085 1.029 -0.205
ENSG00000088448 E010 26.166993 0.367707645 0.487809289 0.69252509 13 110883698 110883708 11 - 1.422 1.439 0.059
ENSG00000088448 E011 47.279243 0.597055080 0.582298640 0.75857700 13 110883709 110883793 85 - 1.698 1.651 -0.162
ENSG00000088448 E012 40.557824 0.074453435 0.016000152 0.08181362 13 110892692 110892956 265 - 1.419 1.789 1.262
ENSG00000088448 E013 33.802595 0.025937204 0.007050768 0.04486259 13 110892957 110893027 71 - 1.396 1.679 0.967
ENSG00000088448 E014 113.273555 0.014816277 0.970830770 0.98724487 13 110893028 110893196 169 - 2.043 2.068 0.082
ENSG00000088448 E015 84.995614 0.044753648 0.481106346 0.68783882 13 110893197 110893263 67 - 1.945 1.908 -0.125
ENSG00000088448 E016 37.010194 0.034832806 0.376702319 0.60962976 13 110894109 110894202 94 - 1.519 1.637 0.404
ENSG00000088448 E017 19.635441 0.027183766 0.331760891 0.57061069 13 110894285 110894393 109 - 1.251 1.367 0.406
ENSG00000088448 E018 19.191582 0.157258289 0.307604312 0.54826582 13 110900530 110900661 132 - 1.360 1.196 -0.575
ENSG00000088448 E019 11.278098 0.144762491 0.306946882 0.54755271 13 110900662 110900694 33 - 1.146 0.976 -0.618
ENSG00000088448 E020 10.800456 0.173139068 0.178656210 0.40217836 13 110900695 110900739 45 - 1.155 0.901 -0.932
ENSG00000088448 E021 6.018219 0.234558513 0.017109490 0.08585383 13 110903475 110903475 1 - 0.997 0.413 -2.491
ENSG00000088448 E022 10.736333 0.115722003 0.112599305 0.30349818 13 110903476 110903539 64 - 1.151 0.887 -0.970
ENSG00000088448 E023 16.466785 0.112038948 0.013721543 0.07324784 13 110904031 110904342 312 - 1.363 0.951 -1.478
ENSG00000088448 E024 6.852329 0.004999177 0.014757819 0.07716899 13 110905023 110905233 211 - 0.999 0.683 -1.233
ENSG00000088448 E025 70.348871 0.034663943 0.072213308 0.22922822 13 110906033 110906124 92 - 1.903 1.761 -0.480
ENSG00000088448 E026 75.297204 0.054231440 0.329208660 0.56821460 13 110910618 110910770 153 - 1.908 1.830 -0.263
ENSG00000088448 E027 2.814144 0.111908237 0.733686883 0.85644209 13 110911654 110911771 118 - 0.540 0.639 0.443
ENSG00000088448 E028 1.159577 0.014848808 0.017249273   13 110914508 110914724 217 - 0.105 0.518 3.071
ENSG00000088448 E029 46.008688 0.065490636 0.871389725 0.93670176 13 110914725 110915071 347 - 1.644 1.697 0.182