ENSG00000076108

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000551812 ENSG00000076108 HEK293_OSMI2_6hA HEK293_TMG_6hB BAZ2A protein_coding protein_coding 34.1764 46.51237 37.06305 3.095785 1.53379 -0.3275538 17.771256 27.674681 17.526354 2.2077531 0.3531631 -0.6587391 0.52267083 0.59423333 0.4741000 -0.12013333 8.970958e-02 4.49707e-37 FALSE TRUE
MSTRG.7475.14 ENSG00000076108 HEK293_OSMI2_6hA HEK293_TMG_6hB BAZ2A protein_coding   34.1764 46.51237 37.06305 3.095785 1.53379 -0.3275538 1.938904 0.000000 4.612295 0.0000000 0.2465819 8.8524655 0.05636250 0.00000000 0.1243667 0.12436667 4.497070e-37 4.49707e-37 FALSE TRUE
MSTRG.7475.4 ENSG00000076108 HEK293_OSMI2_6hA HEK293_TMG_6hB BAZ2A protein_coding   34.1764 46.51237 37.06305 3.095785 1.53379 -0.3275538 2.970851 2.608483 4.219801 0.8057331 0.5824118 0.6918585 0.08448333 0.05466667 0.1130000 0.05833333 1.856028e-01 4.49707e-37 FALSE TRUE
MSTRG.7475.7 ENSG00000076108 HEK293_OSMI2_6hA HEK293_TMG_6hB BAZ2A protein_coding   34.1764 46.51237 37.06305 3.095785 1.53379 -0.3275538 2.816475 5.247341 0.329726 0.2181821 0.1536583 -3.9518897 0.08633333 0.11330000 0.0093000 -0.10400000 1.581546e-05 4.49707e-37 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000076108 E001 0.2735028 0.0259398039 7.206979e-01   12 56595596 56595929 334 - 0.147 0.100 -0.635
ENSG00000076108 E002 385.3028621 0.0534952090 1.903519e-03 1.642755e-02 12 56595930 56596426 497 - 2.329 2.680 1.171
ENSG00000076108 E003 21.9392188 0.0015417643 9.427821e-04 9.444673e-03 12 56596427 56596443 17 - 1.154 1.442 1.007
ENSG00000076108 E004 1751.3446633 0.0007530674 4.672686e-22 1.740197e-19 12 56596444 56598358 1915 - 3.125 3.289 0.542
ENSG00000076108 E005 55.0892831 0.0007310233 9.182935e-01 9.613602e-01 12 56598359 56598379 21 - 1.723 1.749 0.088
ENSG00000076108 E006 283.5119515 0.0002406881 2.451754e-02 1.107322e-01 12 56598380 56598554 175 - 2.399 2.471 0.241
ENSG00000076108 E007 133.7033824 0.0004608039 2.601170e-02 1.153545e-01 12 56598555 56598555 1 - 2.060 2.154 0.316
ENSG00000076108 E008 143.5281609 0.0004081050 2.115994e-01 4.436527e-01 12 56598556 56598556 1 - 2.113 2.173 0.203
ENSG00000076108 E009 166.8022102 0.0015766278 8.307990e-02 2.509137e-01 12 56598557 56598572 16 - 2.165 2.245 0.270
ENSG00000076108 E010 411.1473777 0.0008038951 2.178923e-04 2.870907e-03 12 56598573 56598783 211 - 2.538 2.643 0.350
ENSG00000076108 E011 304.3380684 0.0036029723 2.073572e-04 2.755185e-03 12 56598868 56599011 144 - 2.372 2.528 0.521
ENSG00000076108 E012 420.7608027 0.0028238406 2.014321e-04 2.690561e-03 12 56599129 56599355 227 - 2.524 2.662 0.460
ENSG00000076108 E013 154.0312940 0.0003253346 5.351755e-02 1.879091e-01 12 56599356 56599358 3 - 2.127 2.207 0.267
ENSG00000076108 E014 356.1904518 0.0004468513 2.186442e-04 2.879203e-03 12 56599702 56599848 147 - 2.477 2.578 0.338
ENSG00000076108 E015 310.0750773 0.0035298165 7.521551e-03 4.713056e-02 12 56599964 56600096 133 - 2.406 2.523 0.392
ENSG00000076108 E016 5.9261895 0.0064392770 3.607642e-01 5.962608e-01 12 56600097 56600117 21 - 0.734 0.874 0.552
ENSG00000076108 E017 486.8353001 0.0004270975 9.563756e-04 9.557172e-03 12 56600201 56600467 267 - 2.625 2.709 0.282
ENSG00000076108 E018 200.5399324 0.0033898260 2.044223e-01 4.351346e-01 12 56600468 56600490 23 - 2.249 2.317 0.227
ENSG00000076108 E019 286.1562668 0.0006071662 2.984895e-02 1.268878e-01 12 56600681 56600743 63 - 2.399 2.473 0.245
ENSG00000076108 E020 335.0144128 0.0001583856 7.928225e-02 2.433742e-01 12 56600744 56600832 89 - 2.481 2.538 0.191
ENSG00000076108 E021 393.7544233 0.0001386095 7.755811e-01 8.821050e-01 12 56600943 56601086 144 - 2.570 2.597 0.088
ENSG00000076108 E022 157.4683909 0.0002637745 8.141195e-02 2.476423e-01 12 56601087 56601098 12 - 2.208 2.178 -0.100
ENSG00000076108 E023 255.0963598 0.0001926852 9.283315e-01 9.661887e-01 12 56601180 56601245 66 - 2.384 2.407 0.078
ENSG00000076108 E024 321.9187209 0.0001688490 6.885683e-01 8.282142e-01 12 56601246 56601402 157 - 2.481 2.511 0.099
ENSG00000076108 E025 4.5316804 0.1438858131 6.096074e-01 7.766401e-01 12 56601403 56601529 127 - 0.765 0.713 -0.209
ENSG00000076108 E026 705.5972044 0.0022046748 2.604355e-01 4.993991e-01 12 56601546 56602192 647 - 2.844 2.835 -0.029
ENSG00000076108 E027 260.3200083 0.0002028443 6.449974e-01 8.001960e-01 12 56602713 56602857 145 - 2.402 2.412 0.036
ENSG00000076108 E028 168.2144011 0.0002804187 4.527770e-01 6.677433e-01 12 56603359 56603418 60 - 2.191 2.234 0.143
ENSG00000076108 E029 343.0284051 0.0002161548 4.882620e-03 3.398841e-02 12 56603520 56603700 181 - 2.547 2.511 -0.120
ENSG00000076108 E030 167.1775129 0.0007146277 3.646481e-02 1.455156e-01 12 56604217 56604239 23 - 2.240 2.198 -0.141
ENSG00000076108 E031 197.9319545 0.0002474886 7.840503e-03 4.858594e-02 12 56604240 56604291 52 - 2.319 2.271 -0.160
ENSG00000076108 E032 321.6419629 0.0001757799 3.869804e-01 6.181168e-01 12 56604585 56604799 215 - 2.497 2.500 0.010
ENSG00000076108 E033 18.6552785 0.2013441373 1.820460e-01 4.066503e-01 12 56604800 56605072 273 - 1.385 1.204 -0.634
ENSG00000076108 E034 257.7336167 0.0002280364 8.873514e-01 9.452517e-01 12 56605073 56605214 142 - 2.392 2.410 0.059
ENSG00000076108 E035 139.8513084 0.0004163076 2.723771e-02 1.190021e-01 12 56605215 56605227 13 - 2.168 2.120 -0.162
ENSG00000076108 E036 230.7765743 0.0002696643 8.105293e-02 2.469084e-01 12 56605228 56605327 100 - 2.369 2.347 -0.072
ENSG00000076108 E037 2.6186639 0.0083769161 3.410507e-01 5.789856e-01 12 56605328 56605829 502 - 0.625 0.487 -0.635
ENSG00000076108 E038 291.2015034 0.0007345530 8.738605e-01 9.381167e-01 12 56605830 56605991 162 - 2.445 2.461 0.054
ENSG00000076108 E039 204.5332593 0.0044554372 1.962342e-01 4.248443e-01 12 56605992 56606063 72 - 2.255 2.329 0.245
ENSG00000076108 E040 215.2740365 0.0008391863 7.122196e-01 8.432087e-01 12 56606247 56606312 66 - 2.317 2.327 0.034
ENSG00000076108 E041 3.4246902 0.1423469242 7.448807e-01 8.636023e-01 12 56606313 56606395 83 - 0.671 0.610 -0.264
ENSG00000076108 E042 0.6120945 0.0206433386 5.931317e-01   12 56606396 56606412 17 - 0.147 0.249 0.946
ENSG00000076108 E043 257.0393631 0.0003584803 2.213492e-02 1.030497e-01 12 56606633 56606733 101 - 2.419 2.385 -0.113
ENSG00000076108 E044 299.5114386 0.0006902343 8.607254e-05 1.318638e-03 12 56609736 56609937 202 - 2.509 2.435 -0.247
ENSG00000076108 E045 89.2851383 0.0005112696 5.723388e-01 7.519529e-01 12 56609938 56609946 9 - 1.944 1.942 -0.005
ENSG00000076108 E046 92.8830157 0.0007291636 4.775518e-01 6.854291e-01 12 56610114 56610116 3 - 1.965 1.957 -0.025
ENSG00000076108 E047 203.0240829 0.0002309882 9.823804e-04 9.778614e-03 12 56610117 56610215 99 - 2.338 2.274 -0.212
ENSG00000076108 E048 260.6573978 0.0005760608 6.828412e-11 5.000524e-09 12 56610409 56610517 109 - 2.486 2.347 -0.466
ENSG00000076108 E049 6.8909164 0.0043956730 8.700205e-04 8.849395e-03 12 56610518 56610539 22 - 1.074 0.689 -1.481
ENSG00000076108 E050 3.9516813 0.0484150009 2.347943e-01 4.706059e-01 12 56611295 56611572 278 - 0.793 0.613 -0.744
ENSG00000076108 E051 204.3915505 0.0003802837 6.647589e-11 4.876516e-09 12 56611573 56611633 61 - 2.387 2.238 -0.499
ENSG00000076108 E052 525.8721896 0.0007428122 3.447284e-16 6.110941e-14 12 56611773 56612246 474 - 2.794 2.651 -0.474
ENSG00000076108 E053 95.2423419 0.0008358453 1.862534e-05 3.596783e-04 12 56613015 56613017 3 - 2.056 1.914 -0.479
ENSG00000076108 E054 268.8421131 0.0003288021 2.258034e-08 9.793701e-07 12 56613018 56613233 216 - 2.486 2.379 -0.357
ENSG00000076108 E055 281.2151435 0.0001887397 1.535730e-10 1.047399e-08 12 56613953 56614138 186 - 2.510 2.392 -0.394
ENSG00000076108 E056 0.9714428 0.0162485937 5.596525e-01   12 56614139 56614306 168 - 0.343 0.250 -0.633
ENSG00000076108 E057 256.9903375 0.0002554306 3.500110e-11 2.725352e-09 12 56615014 56615128 115 - 2.477 2.345 -0.440
ENSG00000076108 E058 207.0328604 0.0002377878 8.788256e-13 9.094747e-11 12 56615129 56615218 90 - 2.398 2.239 -0.533
ENSG00000076108 E059 214.2858163 0.0002374327 5.608767e-11 4.173960e-09 12 56615219 56615308 90 - 2.404 2.262 -0.474
ENSG00000076108 E060 158.8896466 0.0002714003 4.073877e-06 9.645031e-05 12 56615309 56615348 40 - 2.260 2.148 -0.372
ENSG00000076108 E061 170.2856654 0.0002454468 5.422954e-05 8.929052e-04 12 56615349 56615395 47 - 2.278 2.187 -0.304
ENSG00000076108 E062 215.6201642 0.0002480461 8.504383e-08 3.212992e-06 12 56615396 56615520 125 - 2.392 2.280 -0.374
ENSG00000076108 E063 148.8705449 0.0003570795 1.053994e-05 2.195427e-04 12 56615521 56615607 87 - 2.232 2.121 -0.370
ENSG00000076108 E064 129.9835592 0.0079809008 2.568083e-02 1.143051e-01 12 56617395 56617532 138 - 2.166 2.070 -0.320
ENSG00000076108 E065 0.1723744 0.0327546963 7.475317e-01   12 56629973 56630124 152 - 0.000 0.100 9.319
ENSG00000076108 E066 53.2613216 0.0102565422 3.565901e-02 1.433510e-01 12 56630125 56630329 205 - 1.798 1.680 -0.399
ENSG00000076108 E067 10.1560579 0.0232176307 9.218700e-01 9.632092e-01 12 56630776 56630841 66 - 1.025 1.054 0.106
ENSG00000076108 E068 7.0335599 0.0097860891 6.060575e-01 7.742435e-01 12 56630842 56630865 24 - 0.846 0.930 0.318
ENSG00000076108 E069 5.5284030 0.0629610357 8.074675e-02 2.463425e-01 12 56634945 56635080 136 - 0.581 0.912 1.351
ENSG00000076108 E070 10.0930415 0.0034827288 8.796684e-01 9.410921e-01 12 56636182 56636293 112 - 1.010 1.045 0.128
ENSG00000076108 E071 5.5714098 0.0047461034 6.585787e-01 8.090819e-01 12 56636294 56636379 86 - 0.765 0.842 0.303
ENSG00000076108 E072 0.1426347 0.0316864521 3.069802e-01   12 56636729 56636816 88 - 0.147 0.000 -10.742
ENSG00000076108 E073 0.3503582 0.0268847483 7.221213e-01   12 56636817 56636905 89 - 0.147 0.100 -0.634