ENSG00000066933

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000356056 ENSG00000066933 HEK293_OSMI2_6hA HEK293_TMG_6hB MYO9A protein_coding protein_coding 4.346261 2.043754 7.976423 0.4176313 0.6286774 1.959286 2.0947657 1.29259811 3.3554708 0.28993641 0.36987919 1.369416 0.54147500 0.625600000 0.41850000 -0.20710000 0.025038342 0.001371738 FALSE TRUE
ENST00000561618 ENSG00000066933 HEK293_OSMI2_6hA HEK293_TMG_6hB MYO9A protein_coding protein_coding 4.346261 2.043754 7.976423 0.4176313 0.6286774 1.959286 0.9709956 0.63276614 1.7238047 0.09273993 0.10232992 1.431576 0.21431667 0.320500000 0.21690000 -0.10360000 0.384179598 0.001371738 FALSE TRUE
ENST00000568042 ENSG00000066933 HEK293_OSMI2_6hA HEK293_TMG_6hB MYO9A protein_coding protein_coding 4.346261 2.043754 7.976423 0.4176313 0.6286774 1.959286 0.2103122 0.02051278 0.2949004 0.02051278 0.05081965 3.320853 0.06112917 0.008766667 0.03710000 0.02833333 0.533965589 0.001371738 FALSE TRUE
MSTRG.11154.2 ENSG00000066933 HEK293_OSMI2_6hA HEK293_TMG_6hB MYO9A protein_coding   4.346261 2.043754 7.976423 0.4176313 0.6286774 1.959286 0.2647314 0.00000000 0.7863961 0.00000000 0.20187753 6.315414 0.03906250 0.000000000 0.09796667 0.09796667 0.001371738 0.001371738 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_6hB HEK293_OSMI2_6hA log2fold_HEK293_OSMI2_6hA_HEK293_TMG_6hB
ENSG00000066933 E001 254.4681047 1.560137544 2.938029e-01 5.344368e-01 15 71822291 71825991 3701 - 2.160 2.655 1.651
ENSG00000066933 E002 7.4241822 0.087287737 3.308805e-04 4.045146e-03 15 71825992 71826048 57 - 0.590 1.272 2.613
ENSG00000066933 E003 21.8748878 0.451183897 1.274868e-01 3.278642e-01 15 71826049 71826271 223 - 1.125 1.599 1.650
ENSG00000066933 E004 31.5105579 0.553262987 1.144370e-01 3.065267e-01 15 71826272 71826579 308 - 1.251 1.778 1.810
ENSG00000066933 E005 12.0948096 0.283871967 9.107736e-02 2.656333e-01 15 71826580 71826610 31 - 0.904 1.344 1.585
ENSG00000066933 E006 19.7728790 0.405942189 8.751842e-02 2.591342e-01 15 71826611 71826733 123 - 1.075 1.570 1.731
ENSG00000066933 E007 37.1031511 0.669212321 2.510449e-01 4.891157e-01 15 71826734 71827039 306 - 1.385 1.769 1.312
ENSG00000066933 E008 10.6231736 0.262605440 2.173951e-01 4.502772e-01 15 71827040 71827043 4 - 0.899 1.226 1.193
ENSG00000066933 E009 17.8684668 0.044679471 1.167368e-01 3.103607e-01 15 71827884 71827933 50 - 1.123 1.412 1.017
ENSG00000066933 E010 27.6956155 0.001547003 3.016838e-02 1.278392e-01 15 71827934 71828026 93 - 1.312 1.581 0.927
ENSG00000066933 E011 34.1860457 0.001169813 7.303770e-01 8.544402e-01 15 71830109 71830205 97 - 1.440 1.581 0.484
ENSG00000066933 E012 35.7958198 0.001658050 9.454145e-01 9.750289e-01 15 71830206 71830311 106 - 1.458 1.581 0.421
ENSG00000066933 E013 1.3989868 0.012185356 2.427327e-01 4.796342e-01 15 71847415 71847468 54 - 0.375 0.206 -1.173
ENSG00000066933 E014 33.0303852 0.008758912 9.685848e-01 9.861153e-01 15 71848845 71848968 124 - 1.425 1.539 0.391
ENSG00000066933 E015 35.8221499 0.001221575 4.972011e-01 6.990503e-01 15 71850036 71850167 132 - 1.445 1.608 0.557
ENSG00000066933 E016 28.1069333 0.008696702 2.365909e-01 4.726279e-01 15 71851253 71851358 106 - 1.323 1.546 0.767
ENSG00000066933 E017 24.3307335 0.004339109 3.693759e-01 6.035529e-01 15 71852132 71852260 129 - 1.281 1.471 0.660
ENSG00000066933 E018 0.3040503 0.024441170 6.533900e-01   15 71852261 71852356 96 - 0.128 0.000 -10.504
ENSG00000066933 E019 38.0134850 0.001803877 7.115883e-01 8.428454e-01 15 71854377 71854569 193 - 1.493 1.588 0.326
ENSG00000066933 E020 19.4406107 0.002135767 7.005295e-01 8.359649e-01 15 71859735 71859796 62 - 1.215 1.298 0.291
ENSG00000066933 E021 26.3935856 0.014114747 3.701844e-01 6.041193e-01 15 71862500 71862611 112 - 1.355 1.391 0.126
ENSG00000066933 E022 18.7759065 0.026139874 7.146496e-01 8.447058e-01 15 71875791 71875838 48 - 1.180 1.345 0.580
ENSG00000066933 E023 35.6437859 0.014807464 9.622857e-01 9.831435e-01 15 71878040 71878231 192 - 1.457 1.579 0.419
ENSG00000066933 E024 25.1441486 0.002288185 8.450608e-02 2.537412e-01 15 71879721 71879837 117 - 1.347 1.324 -0.081
ENSG00000066933 E025 37.2679014 0.000980446 1.898610e-01 4.167752e-01 15 71880335 71880558 224 - 1.502 1.537 0.118
ENSG00000066933 E026 30.0860973 0.001290249 7.619319e-01 8.737790e-01 15 71883594 71883700 107 - 1.391 1.489 0.335
ENSG00000066933 E027 22.6398595 0.001882490 2.982889e-01 5.387580e-01 15 71883701 71883736 36 - 1.293 1.324 0.105
ENSG00000066933 E028 33.0422239 0.001155156 1.914951e-02 9.296555e-02 15 71888004 71888116 113 - 1.471 1.424 -0.163
ENSG00000066933 E029 1.5909500 0.012056753 2.430485e-02 1.100379e-01 15 71888117 71888607 491 - 0.433 0.000 -12.827
ENSG00000066933 E030 7.8516426 0.076344808 6.517336e-02 2.142615e-01 15 71889472 71892964 3493 - 0.916 0.671 -0.975
ENSG00000066933 E031 34.6553536 0.001675944 3.537541e-01 5.906036e-01 15 71892965 71893177 213 - 1.464 1.521 0.197
ENSG00000066933 E032 0.0000000       15 71893462 71893678 217 -      
ENSG00000066933 E033 24.4962146 0.001896077 5.036779e-02 1.805549e-01 15 71893679 71893778 100 - 1.340 1.298 -0.148
ENSG00000066933 E034 2.3909419 0.018117750 9.716570e-01 9.877130e-01 15 71896890 71897460 571 - 0.459 0.536 0.373
ENSG00000066933 E035 72.4411823 0.023902584 2.367690e-01 4.728837e-01 15 71897461 71898108 648 - 1.782 1.818 0.123
ENSG00000066933 E036 72.9204121 0.009303801 3.192031e-03 2.455963e-02 15 71898109 71898838 730 - 1.806 1.739 -0.224
ENSG00000066933 E037 28.0022267 0.024242015 3.919063e-02 1.526659e-01 15 71898839 71899032 194 - 1.403 1.311 -0.318
ENSG00000066933 E038 29.9292830 0.020999382 2.962952e-03 2.317916e-02 15 71899687 71900006 320 - 1.452 1.265 -0.650
ENSG00000066933 E039 18.1153492 0.068372210 2.746318e-02 1.196848e-01 15 71901191 71901340 150 - 1.249 1.041 -0.747
ENSG00000066933 E040 19.7085645 0.013414340 1.655917e-03 1.471394e-02 15 71902941 71903063 123 - 1.283 1.053 -0.821
ENSG00000066933 E041 17.0122668 0.004713118 4.425350e-03 3.151582e-02 15 71903929 71904010 82 - 1.215 1.030 -0.666
ENSG00000066933 E042 11.2767534 0.007634412 7.696893e-01 8.784810e-01 15 71904011 71904039 29 - 0.996 1.077 0.294
ENSG00000066933 E043 15.4647920 0.018107539 9.341324e-01 9.691992e-01 15 71904926 71905006 81 - 1.103 1.229 0.448
ENSG00000066933 E044 21.1161032 0.002741542 4.047255e-01 6.320903e-01 15 71916370 71916492 123 - 1.254 1.298 0.156
ENSG00000066933 E045 13.2232642 0.003404372 9.588278e-02 2.745561e-01 15 71933670 71933709 40 - 1.101 1.031 -0.257
ENSG00000066933 E046 0.6544085 0.019387492 9.895619e-01   15 71935140 71935340 201 - 0.180 0.206 0.244
ENSG00000066933 E047 18.6783442 0.001740030 3.316040e-02 1.364857e-01 15 71935341 71935442 102 - 1.241 1.158 -0.297
ENSG00000066933 E048 12.2946879 0.005847582 6.154400e-02 2.062603e-01 15 71935443 71935484 42 - 1.083 0.978 -0.384
ENSG00000066933 E049 0.3393995 0.025342561 6.492739e-01   15 71938763 71938851 89 - 0.128 0.000 -10.507
ENSG00000066933 E050 16.9895603 0.002071776 1.122980e-02 6.331599e-02 15 71938852 71938927 76 - 1.215 1.077 -0.494
ENSG00000066933 E051 0.0000000       15 71938928 71939011 84 -      
ENSG00000066933 E052 0.0000000       15 71950234 71950391 158 -      
ENSG00000066933 E053 0.4929928 0.025563783 8.067242e-01   15 71951702 71951731 30 - 0.128 0.206 0.829
ENSG00000066933 E054 0.4929928 0.025563783 8.067242e-01   15 71951732 71951776 45 - 0.128 0.206 0.829
ENSG00000066933 E055 16.5968857 0.002076064 2.199104e-03 1.840241e-02 15 71951777 71951896 120 - 1.210 1.005 -0.740
ENSG00000066933 E056 0.0000000       15 71953644 71953692 49 -      
ENSG00000066933 E057 0.0000000       15 71958500 71958516 17 -      
ENSG00000066933 E058 0.0000000       15 71958517 71959900 1384 -      
ENSG00000066933 E059 18.3808287 0.001838167 3.841444e-03 2.825316e-02 15 71959901 71960096 196 - 1.246 1.077 -0.601
ENSG00000066933 E060 0.0000000       15 71960097 71960403 307 -      
ENSG00000066933 E061 19.3827124 0.015295035 8.470179e-03 5.147734e-02 15 71967984 71968125 142 - 1.268 1.097 -0.607
ENSG00000066933 E062 21.0975461 0.018274988 1.331154e-01 3.367002e-01 15 71978171 71978292 122 - 1.276 1.240 -0.124
ENSG00000066933 E063 15.7817271 0.013186327 4.084409e-02 1.569179e-01 15 71991103 71991237 135 - 1.172 1.056 -0.419
ENSG00000066933 E064 16.7187460 0.014543356 2.613315e-02 1.157359e-01 15 71994469 71994585 117 - 1.197 1.057 -0.502
ENSG00000066933 E065 17.6582558 0.002389766 3.160428e-04 3.891483e-03 15 71999851 71999940 90 - 1.242 0.978 -0.949
ENSG00000066933 E066 20.9231689 0.006244948 2.720832e-04 3.448722e-03 15 72007826 72007952 127 - 1.309 1.055 -0.904
ENSG00000066933 E067 13.2606725 0.007977818 1.369500e-03 1.268255e-02 15 72010350 72010377 28 - 1.131 0.850 -1.043
ENSG00000066933 E068 14.6172591 0.003122744 8.673890e-03 5.235564e-02 15 72010378 72010447 70 - 1.152 0.978 -0.632
ENSG00000066933 E069 0.3040503 0.024441170 6.533900e-01   15 72010448 72010450 3 - 0.128 0.000 -10.504
ENSG00000066933 E070 5.2913086 0.044441082 7.836883e-01 8.867883e-01 15 72019039 72019095 57 - 0.711 0.769 0.235
ENSG00000066933 E071 17.8512641 0.008025803 2.277189e-04 2.976163e-03 15 72020918 72021017 100 - 1.251 0.949 -1.089
ENSG00000066933 E072 13.1000596 0.067844541 2.250919e-03 1.873813e-02 15 72027731 72027793 63 - 1.142 0.716 -1.616
ENSG00000066933 E073 15.9431785 0.034117831 1.260640e-03 1.186518e-02 15 72032494 72032588 95 - 1.212 0.881 -1.212
ENSG00000066933 E074 31.8989340 0.013324188 2.328906e-06 5.962639e-05 15 72045724 72046141 418 - 1.502 1.155 -1.211
ENSG00000066933 E075 17.6329579 0.010579518 1.206915e-04 1.745843e-03 15 72046142 72046343 202 - 1.251 0.918 -1.207
ENSG00000066933 E076 21.8485572 0.023323770 4.806350e-03 3.356756e-02 15 72046344 72046634 291 - 1.321 1.117 -0.722
ENSG00000066933 E077 0.0000000       15 72046635 72046637 3 -      
ENSG00000066933 E078 4.6285507 0.014179040 9.240704e-02 2.682124e-01 15 72117680 72117684 5 - 0.722 0.536 -0.814
ENSG00000066933 E079 6.7364362 0.004911656 2.266893e-01 4.613912e-01 15 72117685 72117883 199 - 0.834 0.768 -0.258
ENSG00000066933 E080 0.9941679 0.067367103 2.444687e-01   15 72117884 72117914 31 - 0.179 0.453 1.846
ENSG00000066933 E081 2.7038597 0.010946721 3.627100e-01 5.979256e-01 15 72117915 72118150 236 - 0.531 0.450 -0.397
ENSG00000066933 E082 0.8274031 0.017379545 7.254874e-01   15 72118157 72118223 67 - 0.226 0.206 -0.169
ENSG00000066933 E083 0.9287192 0.015880505 1.070911e-01   15 72118305 72118577 273 - 0.307 0.000 -12.089