• ENSG00000227963
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000227963

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000686992 ENSG00000227963 HEK293_OSMI2_2hA HEK293_TMG_2hB RBM15-AS1 lncRNA lncRNA 6.647328 12.12367 3.632053 0.1221353 0.2382425 -1.736192 0.7723773 1.388340 0.3366608 0.48350072 0.07745329 -2.012119 0.1198167 0.1140000 0.09250000 -0.02150000 0.9011579627 0.0008797594    
MSTRG.1783.3 ENSG00000227963 HEK293_OSMI2_2hA HEK293_TMG_2hB RBM15-AS1 lncRNA   6.647328 12.12367 3.632053 0.1221353 0.2382425 -1.736192 1.5950565 2.652673 0.8532831 0.46821562 0.23664240 -1.624970 0.2451083 0.2189333 0.23830000 0.01936667 0.9744498775 0.0008797594    
MSTRG.1783.4 ENSG00000227963 HEK293_OSMI2_2hA HEK293_TMG_2hB RBM15-AS1 lncRNA   6.647328 12.12367 3.632053 0.1221353 0.2382425 -1.736192 3.0238566 5.506412 1.6958658 0.15841025 0.07393468 -1.693226 0.4448792 0.4545000 0.46986667 0.01536667 0.9193787536 0.0008797594    
MSTRG.1783.5 ENSG00000227963 HEK293_OSMI2_2hA HEK293_TMG_2hB RBM15-AS1 lncRNA   6.647328 12.12367 3.632053 0.1221353 0.2382425 -1.736192 0.8113181 1.877924 0.2094571 0.09323338 0.01095579 -3.104789 0.1167875 0.1550000 0.05796667 -0.09703333 0.0008797594 0.0008797594    
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

Rows: 1-10 / 11

Columns:

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Records:
Use the filters above each column to filter and limit table data. Advanced searches can be performed by using the following operators:
<, <=, >, >=, =, *, !, {, }, ||,&&, [empty], [nonempty], rgx:
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TableFilter v0.7.3

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©2015-2025 Max Guglielmi
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Page of 2
groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000227963 E001 16.648689 0.0013508828 0.0000135444 8.728003e-05 1 110286375 110288571 2197 - 1.417 1.046 -1.309
ENSG00000227963 E002 3.990690 0.0448476086 0.3412754566 4.851921e-01 1 110292260 110292386 127 - 0.460 0.653 0.891
ENSG00000227963 E003 12.328543 0.0436581243 0.8662780720 9.178986e-01 1 110292387 110292507 121 - 0.990 1.030 0.146
ENSG00000227963 E004 1.325276 0.0105221532 0.5296730925 6.624130e-01 1 110315484 110315484 1 - 0.211 0.338 0.911
ENSG00000227963 E005 3.712840 0.0045677914 0.4183095877 5.615929e-01 1 110315485 110315525 41 - 0.460 0.606 0.692
ENSG00000227963 E006 27.280077 0.0009006728 0.4761442049 6.148214e-01 1 110315526 110315624 99 - 1.297 1.354 0.199
ENSG00000227963 E007 54.419638 0.0004735234 0.4276056372 5.704711e-01 1 110315625 110315751 127 - 1.594 1.637 0.147
ENSG00000227963 E008 65.781270 0.0005281712 0.2208798876 3.514883e-01 1 110318765 110318882 118 - 1.664 1.724 0.203
ENSG00000227963 E009 6.596706 0.0027800602 0.9796219619 9.913011e-01 1 110318883 110318886 4 - 0.780 0.783 0.013
ENSG00000227963 E010 21.002827 0.0010815367 0.4251383555 5.680836e-01 1 110331034 110331146 113 - 1.283 1.214 -0.243
ENSG00000227963 E011 60.727336 0.0009052202 0.9614249266 9.797164e-01 1 110338997 110339224 228 - 1.676 1.673 -0.009