ENSG00000214826

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
MSTRG.6797.2 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 1.6588633 1.7006686 1.020819 0.2589034 0.2987300 -0.7307696 0.06756667 0.11030000 0.04883333 -0.06146667 2.243172e-01 1.658906e-15 TRUE  
MSTRG.6797.24 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 1.7620416 1.0487290 0.970565 0.1629517 0.2546833 -0.1106483 0.06203333 0.06416667 0.04586667 -0.01830000 6.068329e-01 1.658906e-15 FALSE  
MSTRG.6797.25 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 2.1994022 1.0858511 2.535970 0.7474159 0.7012393 1.2161636 0.08576250 0.05833333 0.12266667 0.06433333 6.042443e-01 1.658906e-15 FALSE  
MSTRG.6797.26 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 2.3561526 0.6864156 2.247049 0.5502559 0.4608135 1.6964171 0.08516250 0.04723333 0.10660000 0.05936667 4.308715e-01 1.658906e-15 TRUE  
MSTRG.6797.27 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 2.0621800 1.1396401 1.333026 0.2070527 0.1696999 0.2243051 0.07148750 0.06956667 0.06356667 -0.00600000 8.864481e-01 1.658906e-15 FALSE  
MSTRG.6797.29 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 0.4112684 0.0000000 1.490587 0.0000000 0.1589088 7.2293829 0.02004167 0.00000000 0.07163333 0.07163333 1.658906e-15 1.658906e-15 FALSE  
MSTRG.6797.3 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 5.3219663 4.1111983 3.551709 0.8476259 0.1758038 -0.2104943 0.19730417 0.24660000 0.16976667 -0.07683333 5.717076e-02 1.658906e-15    
MSTRG.6797.34 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 2.4726562 1.1567653 1.475602 0.2604574 0.2580091 0.3485335 0.09220000 0.07000000 0.07100000 0.00100000 1.000000e+00 1.658906e-15 FALSE  
MSTRG.6797.35 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 1.2476244 0.1411587 1.530165 0.1411587 0.1906188 3.3489494 0.04545833 0.01036667 0.07293333 0.06256667 7.404847e-02 1.658906e-15 FALSE  
MSTRG.6797.6 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 1.5588859 1.2213058 1.040624 0.2075056 0.1073465 -0.2289428 0.05967083 0.07416667 0.04956667 -0.02460000 2.104405e-01 1.658906e-15 TRUE  
MSTRG.6797.7 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 1.7117414 0.7254685 1.296919 0.3640042 0.5026237 0.8294347 0.06183750 0.04446667 0.06126667 0.01680000 8.045256e-01 1.658906e-15    
MSTRG.6797.8 ENSG00000214826 HEK293_OSMI2_2hA HEK293_TMG_2hB   unprocessed_pseudogene   26.44483 16.38762 20.92792 2.263341 0.4769579 0.3526313 0.3836608 0.8570070 0.000000 0.4427659 0.0000000 -6.4379718 0.02357083 0.06103333 0.00000000 -0.06103333 1.439467e-01 1.658906e-15 TRUE  
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000214826 E001 3.2171645 0.0065429398 1.174563e-01 2.163201e-01 12 9416009 9416075 67 - 0.747 0.508 -1.045
ENSG00000214826 E002 58.6401681 0.0101337982 1.775545e-02 4.661081e-02 12 9418334 9418378 45 - 1.656 1.815 0.540
ENSG00000214826 E003 47.1731000 0.0123247501 6.956683e-03 2.111041e-02 12 9418379 9418380 2 - 1.534 1.735 0.686
ENSG00000214826 E004 54.0569654 0.0118750827 3.472221e-03 1.164498e-02 12 9418381 9418398 18 - 1.584 1.795 0.714
ENSG00000214826 E005 47.1241168 0.0184681828 1.330017e-02 3.661896e-02 12 9418399 9418422 24 - 1.529 1.733 0.695
ENSG00000214826 E006 39.5362951 0.0005517084 1.346129e-04 6.795100e-04 12 9418423 9418435 13 - 1.431 1.657 0.775
ENSG00000214826 E007 35.7364944 0.0005742885 3.560942e-05 2.077947e-04 12 9418436 9418436 1 - 1.364 1.624 0.892
ENSG00000214826 E008 36.8426022 0.0005583695 1.744347e-05 1.096530e-04 12 9418437 9418438 2 - 1.371 1.638 0.916
ENSG00000214826 E009 40.9766512 0.0005475669 4.811962e-06 3.440044e-05 12 9418439 9418449 11 - 1.412 1.683 0.928
ENSG00000214826 E010 41.0917170 0.0007470302 1.300393e-07 1.292389e-06 12 9418450 9418465 16 - 1.371 1.693 1.102
ENSG00000214826 E011 48.8255750 0.0004467413 1.631199e-05 1.032426e-04 12 9418466 9418488 23 - 1.519 1.750 0.785
ENSG00000214826 E012 47.2722243 0.0004852620 1.110282e-04 5.725239e-04 12 9418489 9418501 13 - 1.524 1.733 0.708
ENSG00000214826 E013 50.6906704 0.0004531816 9.474223e-05 4.972884e-04 12 9418502 9418510 9 - 1.558 1.761 0.689
ENSG00000214826 E014 53.1556435 0.0004341788 3.603888e-04 1.620415e-03 12 9418511 9418511 1 - 1.593 1.773 0.611
ENSG00000214826 E015 74.6756312 0.0003806866 3.129080e-05 1.853701e-04 12 9418512 9418528 17 - 1.742 1.920 0.600
ENSG00000214826 E016 74.2004609 0.0003795890 3.284196e-05 1.935184e-04 12 9418529 9418548 20 - 1.739 1.917 0.600
ENSG00000214826 E017 59.1251217 0.0004513168 4.979812e-03 1.587371e-02 12 9418549 9418549 1 - 1.674 1.806 0.448
ENSG00000214826 E018 64.7482831 0.0004084790 1.965811e-03 7.119286e-03 12 9418550 9418568 19 - 1.708 1.848 0.473
ENSG00000214826 E019 79.4792209 0.0003159495 2.857481e-03 9.846146e-03 12 9418569 9418672 104 - 1.806 1.927 0.408
ENSG00000214826 E020 45.1234871 0.0005172750 2.485244e-02 6.156768e-02 12 9418673 9418699 27 - 1.562 1.683 0.411
ENSG00000214826 E021 13.2487922 0.0015977875 2.102740e-01 3.388635e-01 12 9418700 9418774 75 - 1.201 1.083 -0.422
ENSG00000214826 E022 72.6730007 0.0003704435 1.769114e-02 4.646906e-02 12 9418775 9418893 119 - 1.782 1.882 0.337
ENSG00000214826 E023 35.2828035 0.0045503396 3.977298e-02 9.060366e-02 12 9418894 9418916 23 - 1.449 1.589 0.480
ENSG00000214826 E024 27.0916564 0.0009587907 2.871286e-01 4.276051e-01 12 9418917 9418929 13 - 1.378 1.451 0.249
ENSG00000214826 E025 16.3529265 0.0011928462 1.159178e-02 3.256400e-02 12 9419009 9419111 103 - 1.342 1.130 -0.749
ENSG00000214826 E026 17.5728051 0.0017801266 1.617390e-03 6.016171e-03 12 9419112 9419190 79 - 1.053 1.333 0.996
ENSG00000214826 E027 30.3859492 0.0006668129 4.183432e-01 5.616261e-01 12 9419489 9419573 85 - 1.449 1.499 0.172
ENSG00000214826 E028 42.8649420 0.0014416871 8.885813e-02 1.733695e-01 12 9419981 9420081 101 - 1.562 1.657 0.324
ENSG00000214826 E029 16.5639631 0.0311860466 4.757742e-02 1.048716e-01 12 9420173 9420188 16 - 1.054 1.300 0.878
ENSG00000214826 E030 11.7822892 0.1108430665 7.182625e-01 8.134280e-01 12 9420189 9420196 8 - 1.022 1.121 0.361
ENSG00000214826 E031 39.9768332 0.0005950254 7.889377e-01 8.648916e-01 12 9420197 9420255 59 - 1.605 1.588 -0.059
ENSG00000214826 E032 21.9733526 0.0008522364 8.460262e-01 9.042756e-01 12 9420256 9420514 259 - 1.350 1.333 -0.057
ENSG00000214826 E033 67.1775228 0.0013378483 9.534212e-01 9.748636e-01 12 9420515 9420664 150 - 1.819 1.814 -0.016
ENSG00000214826 E034 42.4169286 0.0175937209 3.294295e-01 4.729391e-01 12 9420665 9420896 232 - 1.664 1.587 -0.263
ENSG00000214826 E035 30.1333015 0.0169415749 2.923485e-01 4.333146e-01 12 9421194 9421215 22 - 1.530 1.434 -0.328
ENSG00000214826 E036 28.9318033 0.0007823411 1.771707e-01 2.975441e-01 12 9421216 9421237 22 - 1.509 1.419 -0.309
ENSG00000214826 E037 55.9877538 0.0004292047 1.657778e-08 1.962269e-07 12 9421238 9421387 150 - 1.882 1.615 -0.901
ENSG00000214826 E038 78.3858691 0.0059404237 1.701162e-03 6.287164e-03 12 9421388 9421491 104 - 1.979 1.813 -0.559
ENSG00000214826 E039 17.0089608 0.0130221579 6.669835e-03 2.036423e-02 12 9421658 9421731 74 - 1.385 1.122 -0.926
ENSG00000214826 E040 12.2577950 0.0016232539 4.456377e-02 9.939521e-02 12 9421732 9421817 86 - 1.211 1.019 -0.693
ENSG00000214826 E041 44.1174178 0.0235288941 3.448294e-01 4.889299e-01 12 9421818 9421890 73 - 1.680 1.610 -0.238
ENSG00000214826 E042 27.1031951 0.0007504666 2.290677e-02 5.754697e-02 12 9421891 9421965 75 - 1.514 1.361 -0.530
ENSG00000214826 E043 2.0723469 0.2931220840 1.131879e-01 2.101771e-01 12 9422565 9422621 57 - 0.683 0.313 -1.853
ENSG00000214826 E044 68.1464943 0.0003739766 1.379449e-03 5.239538e-03 12 9424528 9424640 113 - 1.903 1.765 -0.467
ENSG00000214826 E045 92.1786614 0.0003764150 6.701424e-05 3.657002e-04 12 9425471 9425602 132 - 2.039 1.890 -0.501
ENSG00000214826 E046 64.3718961 0.0004076900 6.863738e-03 2.087149e-02 12 9425716 9425824 109 - 1.869 1.748 -0.408
ENSG00000214826 E047 42.1094747 0.0035788510 1.348869e-01 2.409360e-01 12 9426082 9426120 39 - 1.670 1.580 -0.308
ENSG00000214826 E048 64.9429864 0.0028547656 2.282596e-02 5.738204e-02 12 9427633 9427700 68 - 1.869 1.755 -0.383
ENSG00000214826 E049 53.0128116 0.0006801024 1.584656e-02 4.239333e-02 12 9427821 9427865 45 - 1.785 1.665 -0.405
ENSG00000214826 E050 37.9087669 0.0017483603 6.153630e-03 1.901587e-02 12 9429132 9429211 80 - 1.663 1.499 -0.559
ENSG00000214826 E051 15.3940993 0.0012141131 3.912546e-01 5.351809e-01 12 9429560 9429606 47 - 1.241 1.164 -0.271
ENSG00000214826 E052 23.9273598 0.0236046903 2.254665e-01 3.569664e-01 12 9430588 9430719 132 - 1.449 1.328 -0.417
ENSG00000214826 E053 15.6125520 0.0104334760 2.302453e-01 3.627555e-01 12 9430720 9430740 21 - 1.269 1.150 -0.419
ENSG00000214826 E054 27.7963691 0.0172031627 6.403313e-01 7.535941e-01 12 9432366 9432569 204 - 1.460 1.422 -0.130
ENSG00000214826 E055 8.6734664 0.0065143692 1.903422e-01 3.141970e-01 12 9432570 9432574 5 - 0.852 1.008 0.590
ENSG00000214826 E056 42.1479177 0.0005284516 1.454146e-06 1.166611e-05 12 9432575 9432938 364 - 1.757 1.495 -0.890
ENSG00000214826 E057 14.3140304 0.0014001546 8.045984e-02 1.602809e-01 12 9432939 9432968 30 - 1.259 1.102 -0.559
ENSG00000214826 E058 14.2233446 0.0012810013 3.763010e-01 5.206310e-01 12 9432969 9433056 88 - 1.211 1.130 -0.289
ENSG00000214826 E059 6.5329819 0.0028245405 2.630140e-01 4.008722e-01 12 9433308 9433415 108 - 0.775 0.914 0.539
ENSG00000214826 E060 0.3697384 0.0274424043 2.989157e-01 4.403954e-01 12 9433416 9433437 22 - 0.000 0.192 11.136
ENSG00000214826 E061 0.1472490 0.0422639802 3.647643e-01   12 9434026 9434094 69 - 0.140 0.000 -11.331
ENSG00000214826 E062 2.5390701 0.0302586224 2.033017e-01 3.303363e-01 12 9434095 9434139 45 - 0.647 0.428 -1.034
ENSG00000214826 E063 2.3918211 0.0148672481 2.814874e-01 4.213803e-01 12 9434140 9434140 1 - 0.608 0.427 -0.870
ENSG00000214826 E064 4.3952533 0.0037962255 2.411133e-01 3.754918e-01 12 9434762 9434988 227 - 0.802 0.637 -0.681
ENSG00000214826 E065 0.2965864 0.2382341244 3.630089e-01   12 9434989 9435036 48 - 0.000 0.188 11.101
ENSG00000214826 E066 5.9552113 0.0062790782 7.911370e-01 8.664260e-01 12 9435861 9435910 50 - 0.802 0.835 0.127
ENSG00000214826 E067 4.8867811 0.0053185652 7.859009e-01 8.628855e-01 12 9435911 9436048 138 - 0.775 0.736 -0.159
ENSG00000214826 E068 0.5975289 0.0224619540 1.767448e-02 4.643519e-02 12 9436862 9436935 74 - 0.403 0.000 -13.332
ENSG00000214826 E069 0.1515154 0.0424769995 3.638754e-01   12 9436936 9436939 4 - 0.140 0.000 -11.332
ENSG00000214826 E070 0.1515154 0.0424769995 3.638754e-01   12 9436940 9436946 7 - 0.140 0.000 -11.332
ENSG00000214826 E071 2.3898585 0.2657203050 5.030692e-01 6.390558e-01 12 9436947 9436957 11 - 0.607 0.438 -0.809
ENSG00000214826 E072 6.8455878 0.1229387553 8.676197e-01 9.188521e-01 12 9436958 9437063 106 - 0.851 0.884 0.127
ENSG00000214826 E073 4.3115902 0.0812069535 9.064759e-01 9.445787e-01 12 9437064 9437104 41 - 0.682 0.718 0.148
ENSG00000214826 E074 25.9476463 0.0399134485 1.230463e-01 2.242993e-01 12 9437403 9437489 87 - 1.523 1.333 -0.657
ENSG00000214826 E075 37.5725391 0.0064750033 1.586588e-03 5.915304e-03 12 9438011 9438259 249 - 1.687 1.474 -0.729
ENSG00000214826 E076 22.0988917 0.0014399585 3.265541e-03 1.104865e-02 12 9443535 9443609 75 - 1.466 1.247 -0.761
ENSG00000214826 E077 13.9637406 0.0073857433 1.008586e-03 3.988096e-03 12 9443610 9443612 3 - 1.327 1.008 -1.139
ENSG00000214826 E078 31.2826747 0.0006899411 1.950233e-05 1.213153e-04 12 9443613 9443682 70 - 1.637 1.371 -0.914
ENSG00000214826 E079 1.0339748 0.0401259337 6.679866e-01 7.750988e-01 12 9447618 9447744 127 - 0.246 0.324 0.541
ENSG00000214826 E080 2.5357476 0.0752576575 5.970316e-01 7.188672e-01 12 9447745 9447981 237 - 0.607 0.505 -0.470
ENSG00000214826 E081 54.6922956 0.0006676473 3.386041e-12 7.622092e-11 12 9447982 9448103 122 - 1.903 1.566 -1.141
ENSG00000214826 E082 42.3164083 0.0006509321 5.194893e-11 9.622183e-10 12 9448104 9448738 635 - 1.803 1.446 -1.217