ENSG00000205726

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000399338 ENSG00000205726 HEK293_OSMI2_2hA HEK293_TMG_2hB ITSN1 protein_coding protein_coding 16.57752 11.80999 20.28826 0.7352663 0.7319986 0.7801277 1.4915421 0.03582343 3.0723950 0.03582343 0.3403276 6.0718224 0.07538333 0.00270000 0.1506 0.14790000 2.407122e-17 3.79384e-41 FALSE TRUE
ENST00000399349 ENSG00000205726 HEK293_OSMI2_2hA HEK293_TMG_2hB ITSN1 protein_coding protein_coding 16.57752 11.80999 20.28826 0.7352663 0.7319986 0.7801277 1.9026057 0.71911839 1.7696550 0.18895707 0.4167188 1.2873726 0.11098333 0.06113333 0.0868 0.02566667 6.585308e-01 3.79384e-41 FALSE TRUE
ENST00000399352 ENSG00000205726 HEK293_OSMI2_2hA HEK293_TMG_2hB ITSN1 protein_coding protein_coding 16.57752 11.80999 20.28826 0.7352663 0.7319986 0.7801277 7.3743764 6.00947734 9.6483720 0.61691125 0.8892458 0.6821418 0.43663333 0.51560000 0.4789 -0.03670000 8.994696e-01 3.79384e-41 FALSE TRUE
ENST00000440794 ENSG00000205726 HEK293_OSMI2_2hA HEK293_TMG_2hB ITSN1 protein_coding protein_coding 16.57752 11.80999 20.28826 0.7352663 0.7319986 0.7801277 0.9634133 2.15798027 0.0000000 0.20290217 0.0000000 -7.7602078 0.07701667 0.18216667 0.0000 -0.18216667 3.793840e-41 3.79384e-41 FALSE TRUE
ENST00000472548 ENSG00000205726 HEK293_OSMI2_2hA HEK293_TMG_2hB ITSN1 protein_coding processed_transcript 16.57752 11.80999 20.28826 0.7352663 0.7319986 0.7801277 0.9133849 1.63462292 0.1072172 1.09779166 0.1072172 -3.8105011 0.06920000 0.12923333 0.0051 -0.12413333 3.493097e-01 3.79384e-41   FALSE
ENST00000487427 ENSG00000205726 HEK293_OSMI2_2hA HEK293_TMG_2hB ITSN1 protein_coding retained_intron 16.57752 11.80999 20.28826 0.7352663 0.7319986 0.7801277 1.4347721 0.47049971 1.9729012 0.16302518 0.5993672 2.0450053 0.08407917 0.04100000 0.0955 0.05450000 2.867184e-01 3.79384e-41 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000205726 E001 0.3332198 0.0283931678 7.006861e-01   21 33642400 33642451 52 + 0.095 0.157 0.841
ENSG00000205726 E002 0.1515154 0.0422780656 7.993825e-01   21 33642452 33642452 1 + 0.095 0.000 -10.880
ENSG00000205726 E003 1.9219509 0.0077254830 1.245905e-01 2.265496e-01 21 33642453 33642477 25 + 0.536 0.272 -1.480
ENSG00000205726 E004 2.0691999 0.0083136000 8.810424e-02 1.722430e-01 21 33642478 33642482 5 + 0.565 0.272 -1.617
ENSG00000205726 E005 2.5539351 0.0061214469 1.146284e-01 2.122880e-01 21 33642483 33642495 13 + 0.619 0.363 -1.274
ENSG00000205726 E006 2.6991078 0.0054576379 8.289438e-02 1.640748e-01 21 33642496 33642497 2 + 0.644 0.363 -1.381
ENSG00000205726 E007 2.6991078 0.0054576379 8.289438e-02 1.640748e-01 21 33642498 33642500 3 + 0.644 0.363 -1.381
ENSG00000205726 E008 4.8789615 0.0032391242 1.864783e-01 3.093363e-01 21 33642501 33642517 17 + 0.819 0.652 -0.683
ENSG00000205726 E009 8.1221648 0.0035577431 1.278654e-01 2.312063e-01 21 33642518 33642541 24 + 1.010 0.851 -0.600
ENSG00000205726 E010 40.7406653 0.0005530262 1.851406e-05 1.157607e-04 21 33642542 33642713 172 + 1.689 1.461 -0.781
ENSG00000205726 E011 0.4439371 0.0215530788 2.014343e-01 3.279743e-01 21 33689322 33689383 62 + 0.238 0.000 -12.465
ENSG00000205726 E012 1.1156622 0.0117343908 1.850863e-01 3.076028e-01 21 33716431 33716555 125 + 0.391 0.157 -1.743
ENSG00000205726 E013 26.2561512 0.0008526306 1.473489e-03 5.550657e-03 21 33718797 33718809 13 + 1.500 1.295 -0.710
ENSG00000205726 E014 38.9078714 0.0189420122 1.015206e-02 2.913835e-02 21 33718810 33718856 47 + 1.662 1.462 -0.683
ENSG00000205726 E015 59.8552313 0.0020805023 6.354934e-05 3.488217e-04 21 33721178 33721270 93 + 1.842 1.657 -0.626
ENSG00000205726 E016 0.1451727 0.0427603591 7.995647e-01   21 33721932 33721991 60 + 0.095 0.000 -10.880
ENSG00000205726 E017 51.3972609 0.0029185650 1.707226e-02 4.509687e-02 21 33722588 33722651 64 + 1.752 1.641 -0.376
ENSG00000205726 E018 0.1817044 0.0392243758 2.918214e-01   21 33735041 33735043 3 + 0.000 0.157 12.287
ENSG00000205726 E019 77.5001555 0.0006615840 2.949778e-06 2.210461e-05 21 33735044 33735204 161 + 1.950 1.770 -0.604
ENSG00000205726 E020 1.2167259 0.0115215229 9.851450e-01 9.947275e-01 21 33735306 33735626 321 + 0.346 0.363 0.102
ENSG00000205726 E021 0.0000000       21 33750107 33750142 36 +      
ENSG00000205726 E022 53.5033685 0.0004569585 4.115896e-03 1.346848e-02 21 33750143 33750253 111 + 1.770 1.649 -0.410
ENSG00000205726 E023 45.0576060 0.0005434861 1.303283e-01 2.346140e-01 21 33750254 33750322 69 + 1.676 1.618 -0.197
ENSG00000205726 E024 65.6312184 0.0007673492 1.950026e-03 7.071854e-03 21 33751810 33751906 97 + 1.860 1.740 -0.405
ENSG00000205726 E025 0.1472490 0.0428654722 7.996641e-01   21 33754183 33754222 40 + 0.095 0.000 -10.880
ENSG00000205726 E026 69.1280519 0.0003913633 3.035827e-02 7.267134e-02 21 33755297 33755397 101 + 1.866 1.795 -0.239
ENSG00000205726 E027 0.1472490 0.0428654722 7.996641e-01   21 33756787 33757073 287 + 0.095 0.000 -10.880
ENSG00000205726 E028 57.4185523 0.0004322190 8.332547e-02 1.647731e-01 21 33761923 33761986 64 + 1.779 1.719 -0.201
ENSG00000205726 E029 84.7433694 0.0003599117 8.737400e-02 1.711550e-01 21 33765875 33766012 138 + 1.941 1.897 -0.147
ENSG00000205726 E030 81.3500116 0.0003691969 1.902696e-04 9.223175e-04 21 33767713 33767828 116 + 1.954 1.825 -0.436
ENSG00000205726 E031 0.4407149 0.0229246119 9.111464e-01 9.475796e-01 21 33772039 33772060 22 + 0.172 0.157 -0.161
ENSG00000205726 E032 128.8319741 0.0002978976 1.480337e-09 2.125714e-08 21 33772061 33772323 263 + 2.167 1.990 -0.593
ENSG00000205726 E033 0.0000000       21 33774363 33774728 366 +      
ENSG00000205726 E034 109.2147780 0.0005993965 4.864156e-03 1.555248e-02 21 33774729 33774878 150 + 2.061 1.982 -0.263
ENSG00000205726 E035 110.6285690 0.0037913001 6.856409e-01 7.883408e-01 21 33774968 33775108 141 + 2.035 2.041 0.019
ENSG00000205726 E036 81.7170798 0.0043286440 4.001661e-01 5.438723e-01 21 33781461 33781548 88 + 1.916 1.900 -0.055
ENSG00000205726 E037 100.3378393 0.0004121560 1.733161e-01 2.925045e-01 21 33781994 33782133 140 + 2.009 1.984 -0.085
ENSG00000205726 E038 99.3613423 0.0006590401 9.031687e-01 9.423974e-01 21 33794341 33794468 128 + 1.980 2.009 0.095
ENSG00000205726 E039 120.5097409 0.0003095203 2.781256e-01 4.177573e-01 21 33797379 33797553 175 + 2.050 2.109 0.200
ENSG00000205726 E040 71.9621931 0.0003602993 8.801175e-01 9.271127e-01 21 33797554 33797608 55 + 1.842 1.873 0.102
ENSG00000205726 E041 93.7808500 0.0003262950 4.462476e-01 5.877465e-01 21 33799808 33799922 115 + 1.947 1.999 0.175
ENSG00000205726 E042 53.7359110 0.0004387306 9.561136e-01 9.765206e-01 21 33799923 33799929 7 + 1.721 1.747 0.090
ENSG00000205726 E043 0.0000000       21 33802430 33802436 7 +      
ENSG00000205726 E044 0.0000000       21 33802437 33802444 8 +      
ENSG00000205726 E045 135.9537811 0.0002629144 3.214294e-02 7.613251e-02 21 33810975 33811203 229 + 2.091 2.181 0.301
ENSG00000205726 E046 59.8124372 0.0004453409 1.351291e-01 2.412664e-01 21 33811204 33811222 19 + 1.740 1.833 0.312
ENSG00000205726 E047 114.7883314 0.0004449173 3.759475e-02 8.657121e-02 21 33813913 33814072 160 + 2.017 2.112 0.317
ENSG00000205726 E048 2.8849648 0.0339811619 2.186801e-01 3.488316e-01 21 33814073 33814507 435 + 0.644 0.440 -0.959
ENSG00000205726 E049 37.7265663 0.0115700279 1.600887e-02 4.275510e-02 21 33817231 33817736 506 + 1.487 1.694 0.706
ENSG00000205726 E050 5.4106881 0.0599016147 1.937020e-02 5.013606e-02 21 33818026 33818266 241 + 0.919 0.504 -1.738
ENSG00000205726 E051 100.0602522 0.0003407705 4.211072e-01 5.642411e-01 21 33818267 33818382 116 + 1.999 1.994 -0.017
ENSG00000205726 E052 88.9915654 0.0003047083 9.971181e-01 1.000000e+00 21 33818383 33818451 69 + 1.938 1.962 0.081
ENSG00000205726 E053 61.0386518 0.0003829366 4.668399e-01 6.063779e-01 21 33818452 33818472 21 + 1.789 1.780 -0.032
ENSG00000205726 E054 95.0024873 0.0002804316 7.063264e-01 8.044742e-01 21 33819241 33819323 83 + 1.958 1.996 0.127
ENSG00000205726 E055 110.2031602 0.0004088156 1.314186e-02 3.623576e-02 21 33823487 33823653 167 + 1.988 2.098 0.367
ENSG00000205726 E056 53.2748063 0.0014084604 9.412786e-03 2.731403e-02 21 33826818 33826863 46 + 1.658 1.813 0.525
ENSG00000205726 E057 4.8706311 0.0033101028 3.405120e-02 7.985860e-02 21 33828968 33829005 38 + 0.850 0.558 -1.217
ENSG00000205726 E058 4.2555987 0.0050058760 3.864209e-02 8.852383e-02 21 33829006 33829050 45 + 0.803 0.502 -1.296
ENSG00000205726 E059 2.5529160 0.0206189606 3.250923e-01 4.685190e-01 21 33829051 33829168 118 + 0.593 0.439 -0.742
ENSG00000205726 E060 6.9793839 0.0023641158 1.404765e-02 3.833380e-02 21 33829169 33829623 455 + 0.989 0.692 -1.159
ENSG00000205726 E061 75.3358328 0.0003673195 3.155072e-02 7.498010e-02 21 33829624 33829745 122 + 1.829 1.941 0.377
ENSG00000205726 E062 72.6464742 0.0003488672 5.161399e-03 1.636779e-02 21 33834307 33834424 118 + 1.796 1.936 0.472
ENSG00000205726 E063 122.6938082 0.0009429505 8.707123e-02 1.707067e-01 21 33836441 33836632 192 + 2.049 2.132 0.279
ENSG00000205726 E064 0.1515154 0.0422780656 7.993825e-01   21 33836633 33836635 3 + 0.095 0.000 -10.880
ENSG00000205726 E065 430.1786216 0.0115582187 9.355050e-05 4.917007e-04 21 33836987 33838498 1512 + 2.524 2.745 0.734
ENSG00000205726 E066 2.0014707 0.0878760615 8.449507e-01 9.035413e-01 21 33856736 33856857 122 + 0.470 0.442 -0.142
ENSG00000205726 E067 0.1515154 0.0422780656 7.993825e-01   21 33858686 33858696 11 + 0.095 0.000 -10.880
ENSG00000205726 E068 0.1515154 0.0422780656 7.993825e-01   21 33858697 33858792 96 + 0.095 0.000 -10.880
ENSG00000205726 E069 0.4847352 0.2404486951 9.590648e-01 9.783481e-01 21 33865151 33865334 184 + 0.173 0.157 -0.160
ENSG00000205726 E070 0.5503986 0.0206889826 3.047707e-01 4.467978e-01 21 33867233 33867331 99 + 0.095 0.272 1.843
ENSG00000205726 E071 0.3289534 0.0289398359 7.001820e-01   21 33875354 33875357 4 + 0.095 0.157 0.841
ENSG00000205726 E072 0.3289534 0.0289398359 7.001820e-01   21 33875358 33875359 2 + 0.095 0.157 0.841
ENSG00000205726 E073 0.6256415 0.0175284440 6.141156e-01 7.326714e-01 21 33875360 33875521 162 + 0.238 0.157 -0.744
ENSG00000205726 E074 1.1115096 0.0969554449 2.284175e-01 3.605272e-01 21 33882243 33882455 213 + 0.391 0.158 -1.735
ENSG00000205726 E075 1.3296333 0.0097607182 3.405451e-01 4.844906e-01 21 33883550 33883671 122 + 0.432 0.272 -0.968
ENSG00000205726 E076 0.8855825 0.7057530482 9.710653e-01 9.859181e-01 21 33885041 33885123 83 + 0.295 0.261 -0.237
ENSG00000205726 E077 1.2135037 0.1049607631 5.287041e-01 6.616031e-01 21 33885439 33885522 84 + 0.295 0.434 0.820
ENSG00000205726 E078 1.5759569 0.0296653889 6.572469e-01 7.666435e-01 21 33886287 33886460 174 + 0.432 0.363 -0.380
ENSG00000205726 E079 46.7288140 0.0005526622 1.808955e-03 6.627622e-03 21 33888152 33899861 11710 + 1.582 1.767 0.628