ENSG00000198793

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000361445 ENSG00000198793 HEK293_OSMI2_2hA HEK293_TMG_2hB MTOR protein_coding protein_coding 33.6973 35.18533 26.73882 0.930191 0.5387694 -0.3959089 19.76971 14.37391 19.797710 2.532186 0.1751787 0.4616066 0.6068875 0.4054333 0.7407333 0.3353 4.265963e-05 2.301025e-11 FALSE TRUE
ENST00000376838 ENSG00000198793 HEK293_OSMI2_2hA HEK293_TMG_2hB MTOR protein_coding protein_coding 33.6973 35.18533 26.73882 0.930191 0.5387694 -0.3959089 10.26725 18.59308 3.280169 1.511911 0.1430123 -2.4993076 0.2812458 0.5313000 0.1228000 -0.4085 2.301025e-11 2.301025e-11 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000198793 E001 703.7777830 0.0125336362 1.980654e-09 2.775362e-08 1 11106535 11107018 484 - 2.610 2.946 1.118
ENSG00000198793 E002 284.4693929 0.0163031109 1.315645e-05 8.498822e-05 1 11107019 11107056 38 - 2.248 2.544 0.987
ENSG00000198793 E003 583.6148707 0.0055576303 1.616774e-10 2.753937e-09 1 11107057 11107284 228 - 2.593 2.843 0.833
ENSG00000198793 E004 200.4434020 0.0002068389 3.072665e-14 9.407033e-13 1 11107285 11107306 22 - 2.164 2.366 0.674
ENSG00000198793 E005 422.5538173 0.0001759652 6.855908e-26 8.122772e-24 1 11107307 11107500 194 - 2.491 2.687 0.654
ENSG00000198793 E006 299.4381237 0.0010214813 3.840572e-13 1.005507e-11 1 11108181 11108286 106 - 2.347 2.537 0.634
ENSG00000198793 E007 165.3569542 0.0002780435 3.475098e-18 1.790446e-16 1 11109290 11109302 13 - 2.041 2.300 0.867
ENSG00000198793 E008 264.2802280 0.0019228608 4.385839e-08 4.783443e-07 1 11109303 11109370 68 - 2.304 2.473 0.564
ENSG00000198793 E009 296.4825447 0.0012975434 1.663703e-09 2.366953e-08 1 11109649 11109729 81 - 2.356 2.521 0.550
ENSG00000198793 E010 6.1736785 0.0094745702 4.622500e-01 6.021044e-01 1 11111514 11111753 240 - 0.895 0.800 -0.369
ENSG00000198793 E011 273.6483757 0.0014451833 6.355867e-09 8.138010e-08 1 11112852 11112917 66 - 2.320 2.487 0.556
ENSG00000198793 E012 337.6004579 0.0011938479 4.974768e-09 6.495657e-08 1 11114318 11114453 136 - 2.422 2.573 0.502
ENSG00000198793 E013 2.1400986 0.4276129496 7.479582e-01 8.353580e-01 1 11114454 11114629 176 - 0.546 0.468 -0.376
ENSG00000198793 E014 225.7502579 0.0002910292 1.910198e-04 9.255276e-04 1 11114813 11114887 75 - 2.288 2.380 0.309
ENSG00000198793 E015 232.3766338 0.0001920813 2.879459e-06 2.162985e-05 1 11115396 11115468 73 - 2.287 2.400 0.377
ENSG00000198793 E016 6.4162192 0.0025097573 2.860876e-02 6.922603e-02 1 11115469 11115663 195 - 1.001 0.733 -1.032
ENSG00000198793 E017 221.5883468 0.0001909784 2.846627e-06 2.141634e-05 1 11117004 11117086 83 - 2.264 2.380 0.386
ENSG00000198793 E018 278.8597375 0.0008141723 9.865600e-04 3.912913e-03 1 11121246 11121368 123 - 2.386 2.469 0.276
ENSG00000198793 E019 322.3200120 0.0046083445 4.013254e-01 5.450172e-01 1 11121979 11122126 148 - 2.482 2.513 0.105
ENSG00000198793 E020 302.7092899 0.0030325922 1.293120e-01 2.332132e-01 1 11124498 11124633 136 - 2.443 2.494 0.168
ENSG00000198793 E021 304.3904192 0.0019719901 1.051241e-04 5.457181e-04 1 11126622 11126796 175 - 2.404 2.519 0.384
ENSG00000198793 E022 262.7376822 0.0001682837 1.884468e-02 4.899362e-02 1 11127010 11127144 135 - 2.380 2.432 0.174
ENSG00000198793 E023 287.9529814 0.0001580088 6.706907e-01 7.770634e-01 1 11127624 11127806 183 - 2.458 2.447 -0.034
ENSG00000198793 E024 153.1063017 0.0002565412 1.340264e-01 2.397471e-01 1 11128004 11128041 38 - 2.203 2.158 -0.151
ENSG00000198793 E025 208.3476508 0.0002161186 8.821500e-02 1.724031e-01 1 11128042 11128126 85 - 2.336 2.291 -0.148
ENSG00000198793 E026 211.2908740 0.0002207916 7.721810e-01 8.529328e-01 1 11128454 11128552 99 - 2.321 2.312 -0.029
ENSG00000198793 E027 180.0659499 0.0019398495 6.841581e-01 7.871905e-01 1 11128855 11128951 97 - 2.237 2.251 0.047
ENSG00000198793 E028 179.3780288 0.0065338217 9.910752e-01 9.985387e-01 1 11129738 11129838 101 - 2.242 2.247 0.016
ENSG00000198793 E029 224.2405670 0.0025165944 9.279446e-01 9.586428e-01 1 11130529 11130777 249 - 2.343 2.340 -0.008
ENSG00000198793 E030 13.4601246 0.0013331472 3.088343e-08 3.465892e-07 1 11130778 11131558 781 - 1.388 0.873 -1.859
ENSG00000198793 E031 36.5211846 0.0008691858 2.019499e-01 3.286443e-01 1 11131594 11133079 1486 - 1.613 1.537 -0.258
ENSG00000198793 E032 143.4865673 0.0014224230 1.301935e-01 2.344359e-01 1 11133080 11133197 118 - 2.115 2.167 0.174
ENSG00000198793 E033 168.2995433 0.0002009825 9.570229e-01 9.770570e-01 1 11134351 11134466 116 - 2.219 2.217 -0.009
ENSG00000198793 E034 0.9577023 0.0188707897 8.094094e-01 8.789619e-01 1 11138954 11139303 350 - 0.318 0.274 -0.296
ENSG00000198793 E035 177.5427095 0.0002319182 6.082802e-01 7.280599e-01 1 11139304 11139435 132 - 2.250 2.234 -0.051
ENSG00000198793 E036 172.6111706 0.0023403398 9.702595e-01 9.853878e-01 1 11139533 11139658 126 - 2.227 2.228 0.002
ENSG00000198793 E037 0.9535482 0.0358204235 2.525153e-01 3.888689e-01 1 11139659 11139660 2 - 0.134 0.339 1.713
ENSG00000198793 E038 154.4701280 0.0005743838 5.212593e-01 6.551299e-01 1 11144648 11144755 108 - 2.167 2.186 0.062
ENSG00000198793 E039 3.0186351 0.1680467334 3.163000e-01 4.590499e-01 1 11144756 11144967 212 - 0.726 0.485 -1.072
ENSG00000198793 E040 113.7866948 0.0002870939 1.455479e-01 2.556119e-01 1 11144968 11145045 78 - 2.078 2.027 -0.169
ENSG00000198793 E041 135.3855702 0.0002338425 7.561983e-01 8.413370e-01 1 11146676 11146791 116 - 2.131 2.120 -0.036
ENSG00000198793 E042 102.3737200 0.0032815789 2.063039e-01 3.340889e-01 1 11150126 11150226 101 - 2.038 1.982 -0.189
ENSG00000198793 E043 123.9643767 0.0017155523 2.097180e-02 5.353137e-02 1 11157152 11157291 140 - 2.136 2.050 -0.288
ENSG00000198793 E044 98.5409579 0.0060539502 4.752504e-02 1.047759e-01 1 11167442 11167517 76 - 2.045 1.944 -0.339
ENSG00000198793 E045 141.9664232 0.0009247050 2.694077e-04 1.255127e-03 1 11199258 11199403 146 - 2.211 2.091 -0.403
ENSG00000198793 E046 168.0294948 0.0014408780 9.288789e-04 3.715418e-03 1 11199541 11199703 163 - 2.279 2.172 -0.360
ENSG00000198793 E047 154.7952209 0.0064959263 3.622371e-02 8.401142e-02 1 11204561 11204703 143 - 2.238 2.140 -0.327
ENSG00000198793 E048 163.1966512 0.0005673986 1.967901e-04 9.500597e-04 1 11209312 11209458 147 - 2.268 2.156 -0.372
ENSG00000198793 E049 128.7484762 0.0002698382 2.813758e-06 2.119852e-05 1 11210814 11210906 93 - 2.185 2.036 -0.500
ENSG00000198793 E050 179.3354789 0.0041197208 9.734642e-06 6.491601e-05 1 11212312 11212474 163 - 2.344 2.166 -0.593
ENSG00000198793 E051 137.8378263 0.0078017547 9.876089e-03 2.846053e-02 1 11212796 11212908 113 - 2.206 2.077 -0.432
ENSG00000198793 E052 151.3735330 0.0125106182 1.082267e-02 3.073902e-02 1 11213399 11213566 168 - 2.258 2.110 -0.495
ENSG00000198793 E053 116.6850856 0.0041120397 2.272574e-05 1.390609e-04 1 11216148 11216234 87 - 2.163 1.974 -0.632
ENSG00000198793 E054 221.0156391 0.0089749738 9.341785e-08 9.537985e-07 1 11228668 11228918 251 - 2.478 2.208 -0.902
ENSG00000198793 E055 156.3753148 0.0065217729 1.111109e-11 2.297493e-10 1 11230925 11231054 130 - 2.354 2.026 -1.096
ENSG00000198793 E056 145.5018233 0.0063393239 2.739867e-09 3.749347e-08 1 11231300 11231434 135 - 2.305 2.018 -0.960
ENSG00000198793 E057 115.7056583 0.0106057380 3.623993e-05 2.110398e-04 1 11232436 11232528 93 - 2.185 1.943 -0.809
ENSG00000198793 E058 99.0267491 0.0081560774 6.878863e-05 3.742672e-04 1 11233398 11233487 90 - 2.109 1.887 -0.745
ENSG00000198793 E059 93.8933875 0.0113038866 8.931044e-04 3.590060e-03 1 11234143 11234265 123 - 2.078 1.875 -0.681
ENSG00000198793 E060 128.4089558 0.0106511613 3.285534e-05 1.935792e-04 1 11237843 11238048 206 - 2.230 1.989 -0.806
ENSG00000198793 E061 139.7386500 0.0057712920 3.262178e-07 2.995394e-06 1 11238402 11238617 216 - 2.267 2.026 -0.807
ENSG00000198793 E062 145.4927020 0.0093209696 4.698412e-06 3.365345e-05 1 11240303 11240547 245 - 2.287 2.040 -0.827
ENSG00000198793 E063 85.8098310 0.0086876518 2.820153e-06 2.123881e-05 1 11241553 11241681 129 - 2.071 1.799 -0.916
ENSG00000198793 E064 121.0417267 0.0167560030 5.063252e-06 3.598777e-05 1 11243114 11243300 187 - 2.236 1.922 -1.052
ENSG00000198793 E065 97.6182364 0.0145337514 4.038380e-07 3.638979e-06 1 11247625 11247733 109 - 2.156 1.812 -1.154
ENSG00000198793 E066 176.9658328 0.0139666196 2.708221e-09 3.709525e-08 1 11247819 11248094 276 - 2.423 2.053 -1.239
ENSG00000198793 E067 137.3621354 0.0049634791 2.889153e-15 1.030969e-13 1 11253839 11253973 135 - 2.310 1.948 -1.210
ENSG00000198793 E068 136.9744296 0.0087614481 2.529881e-09 3.481610e-08 1 11255992 11256192 201 - 2.295 1.973 -1.079
ENSG00000198793 E069 142.8679072 0.0154684760 1.544083e-08 1.837564e-07 1 11256933 11257165 233 - 2.335 1.957 -1.265
ENSG00000198793 E070 92.2080112 0.0072799824 2.130610e-14 6.679425e-13 1 11258485 11258593 109 - 2.164 1.737 -1.437
ENSG00000198793 E071 91.8881079 0.0005825183 1.921508e-27 2.592763e-25 1 11259248 11259423 176 - 2.159 1.739 -1.412
ENSG00000198793 E072 3.5948294 0.0072271463 3.828128e-01 5.269851e-01 1 11259424 11259450 27 - 0.726 0.595 -0.557
ENSG00000198793 E073 1.8068774 0.0083753478 5.686200e-01 6.952496e-01 1 11262222 11262444 223 - 0.388 0.485 0.511
ENSG00000198793 E074 37.0487816 0.0110689326 9.622910e-05 5.043801e-04 1 11262445 11262552 108 - 1.723 1.422 -1.027
ENSG00000198793 E075 0.5244761 0.2968932982 5.526657e-01 6.819260e-01 1 11262763 11262916 154 - 0.237 0.114 -1.272
ENSG00000198793 E076 0.4031496 0.0246708919 2.580729e-01 3.952753e-01 1 11273196 11274139 944 - 0.001 0.201 8.909