ENSG00000197694

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000358161 ENSG00000197694 HEK293_OSMI2_2hA HEK293_TMG_2hB SPTAN1 protein_coding protein_coding 74.88423 91.48685 53.61398 1.464307 1.998854 -0.7708436 30.898544 28.771791 26.839206 1.8654663 1.2989877 -0.1002769 0.43647917 0.31510000 0.50060000 0.18550000 7.513851e-05 8.063744e-14 FALSE TRUE
ENST00000372731 ENSG00000197694 HEK293_OSMI2_2hA HEK293_TMG_2hB SPTAN1 protein_coding protein_coding 74.88423 91.48685 53.61398 1.464307 1.998854 -0.7708436 8.666962 9.201568 7.437001 3.0679343 0.6833066 -0.3067871 0.12108333 0.10170000 0.13910000 0.03740000 5.889664e-01 8.063744e-14 FALSE TRUE
ENST00000625980 ENSG00000197694 HEK293_OSMI2_2hA HEK293_TMG_2hB SPTAN1 protein_coding retained_intron 74.88423 91.48685 53.61398 1.464307 1.998854 -0.7708436 4.355810 4.932556 2.356412 0.4125191 0.2190730 -1.0625559 0.05545417 0.05403333 0.04376667 -0.01026667 5.334679e-01 8.063744e-14 FALSE TRUE
MSTRG.33475.36 ENSG00000197694 HEK293_OSMI2_2hA HEK293_TMG_2hB SPTAN1 protein_coding   74.88423 91.48685 53.61398 1.464307 1.998854 -0.7708436 14.716707 33.776835 1.547658 6.0732588 0.1759100 -4.4390112 0.16306667 0.36736667 0.02890000 -0.33846667 8.063744e-14 8.063744e-14 FALSE TRUE
MSTRG.33475.7 ENSG00000197694 HEK293_OSMI2_2hA HEK293_TMG_2hB SPTAN1 protein_coding   74.88423 91.48685 53.61398 1.464307 1.998854 -0.7708436 2.815211 2.240089 4.285652 0.2699774 0.3504479 0.9328949 0.04145000 0.02460000 0.08046667 0.05586667 2.392904e-06 8.063744e-14 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000197694 E001 0.5922303 0.0179883198 1.718231e-01 2.905829e-01 9 128552558 128552586 29 + 0.335 0.105 -2.091
ENSG00000197694 E002 0.4407149 0.0216382791 3.755473e-01 5.199728e-01 9 128552587 128552589 3 + 0.249 0.105 -1.506
ENSG00000197694 E003 0.6621601 0.0166789361 7.182201e-01 8.134054e-01 9 128552590 128552592 3 + 0.249 0.189 -0.504
ENSG00000197694 E004 3.2276493 0.0054614768 1.249486e-03 4.808469e-03 9 128552593 128552597 5 + 0.857 0.374 -2.183
ENSG00000197694 E005 9.4800358 0.0110849225 8.157788e-06 5.530592e-05 9 128552598 128552602 5 + 1.257 0.751 -1.880
ENSG00000197694 E006 123.6210000 0.0118378064 5.764859e-11 1.058794e-09 9 128552603 128552696 94 + 2.284 1.889 -1.323
ENSG00000197694 E007 3.0518005 0.0108074512 1.393951e-01 2.472149e-01 9 128552746 128552805 60 + 0.407 0.659 1.200
ENSG00000197694 E008 6.6153438 0.0025276140 6.334725e-02 1.322751e-01 9 128552969 128553031 63 + 0.688 0.937 0.982
ENSG00000197694 E009 10.6859100 0.0017170830 5.416600e-01 6.726188e-01 9 128553081 128553146 66 + 0.996 1.067 0.259
ENSG00000197694 E010 16.3959280 0.0056324125 3.338800e-01 4.776504e-01 9 128553147 128553311 165 + 1.152 1.249 0.345
ENSG00000197694 E011 1.0694743 0.0120075953 2.365456e-02 5.909737e-02 9 128553312 128553321 10 + 0.000 0.421 12.821
ENSG00000197694 E012 0.6663248 0.1055437075 1.003909e-01 1.910646e-01 9 128553322 128553331 10 + 0.000 0.319 12.222
ENSG00000197694 E013 0.8135738 0.0865432230 3.574748e-01 5.018789e-01 9 128553332 128553362 31 + 0.142 0.319 1.484
ENSG00000197694 E014 0.1482932 0.0421298975 6.746011e-01   9 128553363 128553382 20 + 0.000 0.105 10.233
ENSG00000197694 E015 0.6652806 0.0220489918 5.122851e-01 6.471957e-01 9 128555349 128555399 51 + 0.142 0.260 1.079
ENSG00000197694 E016 65.9092142 0.0474176714 1.365142e-06 1.101128e-05 9 128566738 128566740 3 + 2.066 1.537 -1.784
ENSG00000197694 E017 245.7338039 0.0191595364 1.358655e-09 1.964533e-08 9 128566741 128566977 237 + 2.589 2.176 -1.378
ENSG00000197694 E018 203.7000255 0.0107980500 6.540630e-15 2.216245e-13 9 128568772 128568897 126 + 2.514 2.085 -1.435
ENSG00000197694 E019 0.0000000       9 128572756 128572824 69 +      
ENSG00000197694 E020 232.3711523 0.0104345535 8.604327e-14 2.468672e-12 9 128574675 128574815 141 + 2.559 2.161 -1.330
ENSG00000197694 E021 218.6896052 0.0171889159 1.603036e-08 1.902226e-07 9 128575199 128575345 147 + 2.520 2.152 -1.231
ENSG00000197694 E022 213.0456947 0.0157493172 1.845723e-08 2.166998e-07 9 128576823 128576956 134 + 2.503 2.149 -1.182
ENSG00000197694 E023 221.4751372 0.0072564768 2.005560e-11 3.973929e-10 9 128577129 128577273 145 + 2.499 2.190 -1.031
ENSG00000197694 E024 233.4779577 0.0039240640 1.411114e-15 5.231533e-14 9 128577352 128577506 155 + 2.516 2.220 -0.989
ENSG00000197694 E025 223.5701984 0.0004620322 4.131851e-42 1.630764e-39 9 128578110 128578245 136 + 2.516 2.176 -1.136
ENSG00000197694 E026 170.8798991 0.0048827674 1.679469e-17 7.992224e-16 9 128579637 128579738 102 + 2.410 2.049 -1.207
ENSG00000197694 E027 83.1968768 0.0324691277 1.366373e-04 6.886097e-04 9 128580922 128580952 31 + 2.090 1.754 -1.131
ENSG00000197694 E028 152.1076933 0.0154738840 1.607244e-05 1.018762e-04 9 128580953 128581059 107 + 2.320 2.049 -0.906
ENSG00000197694 E029 179.1844303 0.0120969546 1.915996e-08 2.242554e-07 9 128581782 128581892 111 + 2.414 2.092 -1.075
ENSG00000197694 E030 0.6256415 0.0175425376 1.718966e-01 2.906760e-01 9 128581893 128581946 54 + 0.335 0.105 -2.089
ENSG00000197694 E031 162.3019462 0.0072767282 4.080159e-13 1.064556e-11 9 128582479 128582556 78 + 2.384 2.032 -1.178
ENSG00000197694 E032 238.6485580 0.0110629624 1.850948e-09 2.609829e-08 9 128582694 128582849 156 + 2.538 2.215 -1.077
ENSG00000197694 E033 317.4435741 0.0032898980 1.164174e-20 8.061013e-19 9 128583077 128583281 205 + 2.655 2.345 -1.031
ENSG00000197694 E034 319.4390489 0.0034648588 5.792971e-17 2.563562e-15 9 128583788 128583969 182 + 2.645 2.363 -0.937
ENSG00000197694 E035 384.5863215 0.0075742401 1.257239e-07 1.253052e-06 9 128584282 128584525 244 + 2.700 2.471 -0.765
ENSG00000197694 E036 260.0829062 0.0039317765 2.305922e-08 2.656915e-07 9 128584721 128584843 123 + 2.516 2.316 -0.666
ENSG00000197694 E037 375.4942022 0.0039710346 1.292196e-07 1.284716e-06 9 128585748 128585965 218 + 2.663 2.486 -0.590
ENSG00000197694 E038 243.8894165 0.0042290452 1.253346e-05 8.143031e-05 9 128587606 128587698 93 + 2.466 2.307 -0.529
ENSG00000197694 E039 308.2520736 0.0026562841 3.092511e-09 4.184465e-08 9 128588809 128588943 135 + 2.579 2.398 -0.602
ENSG00000197694 E040 264.7389876 0.0072096242 1.254469e-05 8.149488e-05 9 128591477 128591579 103 + 2.518 2.328 -0.634
ENSG00000197694 E041 195.0165996 0.0056488974 1.340832e-04 6.770885e-04 9 128591580 128591625 46 + 2.368 2.211 -0.525
ENSG00000197694 E042 49.1490574 0.0270673443 2.938149e-01 4.348608e-01 9 128592983 128592983 1 + 1.737 1.648 -0.303
ENSG00000197694 E043 83.6166407 0.0154539684 3.210164e-02 7.605563e-02 9 128592984 128593042 59 + 1.993 1.855 -0.464
ENSG00000197694 E044 44.2925871 0.0004808427 4.493133e-13 1.166681e-11 9 128593043 128594121 1079 + 1.835 1.461 -1.275
ENSG00000197694 E045 10.0115422 0.0079290516 1.263442e-03 4.854879e-03 9 128594122 128594174 53 + 1.207 0.863 -1.264
ENSG00000197694 E046 391.6126450 0.0044481350 7.178603e-08 7.494571e-07 9 128594175 128594373 199 + 2.686 2.499 -0.623
ENSG00000197694 E047 303.1784700 0.0054291976 2.141053e-05 1.318048e-04 9 128598400 128598485 86 + 2.561 2.399 -0.542
ENSG00000197694 E048 187.2229236 0.0089076344 1.858517e-04 9.029350e-04 9 128598486 128598504 19 + 2.363 2.181 -0.609
ENSG00000197694 E049 1.4016395 0.0099139360 1.252250e-01 2.274523e-01 9 128598505 128598726 222 + 0.522 0.260 -1.505
ENSG00000197694 E050 177.7830251 0.0096834882 6.613539e-05 3.614456e-04 9 128598963 128598986 24 + 2.353 2.148 -0.684
ENSG00000197694 E051 23.0543521 0.0165292843 6.548191e-05 3.582773e-04 9 128598987 128599963 977 + 1.555 1.186 -1.284
ENSG00000197694 E052 15.5218776 0.0570768025 1.430980e-02 3.893364e-02 9 128599964 128600079 116 + 1.378 1.044 -1.186
ENSG00000197694 E053 184.4257551 0.0101256178 3.909762e-03 1.289080e-02 9 128600080 128600115 36 + 2.337 2.191 -0.487
ENSG00000197694 E054 0.7331471 0.0153787590 8.050429e-02 1.603475e-01 9 128601345 128601400 56 + 0.000 0.321 12.237
ENSG00000197694 E055 186.2875417 0.0040647363 8.889764e-03 2.600465e-02 9 128603543 128603590 48 + 2.312 2.216 -0.321
ENSG00000197694 E056 207.3106219 0.0001952209 5.161588e-05 2.897926e-04 9 128604326 128604417 92 + 2.357 2.262 -0.319
ENSG00000197694 E057 256.4064551 0.0015628121 4.076456e-04 1.803785e-03 9 128605034 128605178 145 + 2.450 2.355 -0.315
ENSG00000197694 E058 139.8400009 0.0021417107 3.063906e-03 1.045513e-02 9 128605296 128605326 31 + 2.192 2.090 -0.341
ENSG00000197694 E059 300.8594336 0.0015300851 1.669875e-04 8.221535e-04 9 128605327 128605477 151 + 2.520 2.423 -0.321
ENSG00000197694 E060 300.7126021 0.0001590874 3.321536e-08 3.708262e-07 9 128607604 128607703 100 + 2.527 2.417 -0.365
ENSG00000197694 E061 418.9404231 0.0001700485 5.294613e-08 5.678490e-07 9 128607852 128608035 184 + 2.661 2.569 -0.306
ENSG00000197694 E062 163.5738295 0.0002119913 2.451849e-04 1.155203e-03 9 128608036 128608049 14 + 2.257 2.161 -0.323
ENSG00000197694 E063 4.8326744 0.0035247551 2.487237e-02 6.161001e-02 9 128608050 128608129 80 + 0.922 0.631 -1.168
ENSG00000197694 E064 395.3547882 0.0037007498 3.290002e-03 1.112061e-02 9 128608130 128608276 147 + 2.635 2.546 -0.297
ENSG00000197694 E065 292.0066089 0.0041197315 1.199703e-02 3.352361e-02 9 128608874 128608938 65 + 2.500 2.416 -0.279
ENSG00000197694 E066 269.4313032 0.0013427410 1.871748e-05 1.168676e-04 9 128608939 128608977 39 + 2.480 2.369 -0.372
ENSG00000197694 E067 432.1614103 0.0020301281 6.955863e-03 2.110893e-02 9 128609122 128609238 117 + 2.658 2.593 -0.217
ENSG00000197694 E068 290.5557833 0.0017987732 2.349735e-01 3.683128e-01 9 128609239 128609284 46 + 2.463 2.437 -0.086
ENSG00000197694 E069 0.2987644 0.0270234045 1.190755e-01   9 128609285 128609561 277 + 0.249 0.000 -12.520
ENSG00000197694 E070 0.2965864 0.2717923884 3.946971e-01   9 128609592 128609650 59 + 0.000 0.185 11.197
ENSG00000197694 E071 6.8598277 0.0820623408 1.368047e-02 3.749547e-02 9 128609651 128609665 15 + 0.522 1.002 1.962
ENSG00000197694 E072 1.1802934 0.0118617095 3.958751e-01 5.396580e-01 9 128611602 128611712 111 + 0.407 0.260 -0.918
ENSG00000197694 E073 0.8804848 0.2058977384 4.683170e-01 6.077339e-01 9 128611713 128611713 1 + 0.334 0.193 -1.047
ENSG00000197694 E074 427.5095581 0.0009105181 3.204052e-01 4.635306e-01 9 128611714 128611845 132 + 2.622 2.609 -0.044
ENSG00000197694 E075 0.7384326 0.0379191037 5.128230e-01 6.477198e-01 9 128611894 128612108 215 + 0.142 0.261 1.085
ENSG00000197694 E076 441.7262896 0.0001323053 4.108306e-01 5.544084e-01 9 128612109 128612246 138 + 2.632 2.625 -0.023
ENSG00000197694 E077 377.2594878 0.0001362473 3.796728e-01 5.239234e-01 9 128613381 128613485 105 + 2.566 2.557 -0.031
ENSG00000197694 E078 552.4539534 0.0001131617 3.588638e-01 5.032404e-01 9 128615632 128615840 209 + 2.731 2.724 -0.023
ENSG00000197694 E079 421.5072708 0.0002295293 1.462787e-01 2.566264e-01 9 128617640 128617760 121 + 2.586 2.621 0.118
ENSG00000197694 E080 412.8974834 0.0012455061 2.974912e-01 4.388358e-01 9 128617987 128618108 122 + 2.578 2.612 0.115
ENSG00000197694 E081 376.0921906 0.0001633114 1.205933e-01 2.208115e-01 9 128618871 128618952 82 + 2.535 2.573 0.127
ENSG00000197694 E082 298.7894387 0.0001821293 1.355192e-02 3.719980e-02 9 128618953 128619003 51 + 2.418 2.480 0.207
ENSG00000197694 E083 462.4781081 0.0001313584 8.055995e-15 2.686944e-13 9 128621158 128621256 99 + 2.550 2.698 0.493
ENSG00000197694 E084 3.1498732 0.0283553487 9.197797e-01 9.533113e-01 9 128621667 128622102 436 + 0.613 0.603 -0.042
ENSG00000197694 E085 644.3991264 0.0005526134 5.944507e-20 3.745158e-18 9 128624328 128624487 160 + 2.672 2.851 0.597
ENSG00000197694 E086 9.4048776 0.1026155097 4.112165e-01 5.548027e-01 9 128624488 128624824 337 + 1.103 0.941 -0.595
ENSG00000197694 E087 2.4829851 0.1590760048 1.180368e-01 2.171282e-01 9 128624825 128624865 41 + 0.722 0.371 -1.661
ENSG00000197694 E088 5.5941391 0.0079351481 2.850823e-03 9.826244e-03 9 128624866 128625102 237 + 1.013 0.631 -1.506
ENSG00000197694 E089 529.1814296 0.0016035349 1.759041e-11 3.515614e-10 9 128625103 128625179 77 + 2.586 2.767 0.603
ENSG00000197694 E090 634.6698964 0.0013461257 3.973930e-13 1.037983e-11 9 128625769 128625911 143 + 2.667 2.845 0.594
ENSG00000197694 E091 389.2621418 0.0001807222 1.553865e-22 1.315936e-20 9 128625912 128625961 50 + 2.435 2.640 0.682
ENSG00000197694 E092 218.1672689 0.0002737332 2.620061e-17 1.210050e-15 9 128625962 128625978 17 + 2.158 2.395 0.791
ENSG00000197694 E093 0.4815130 0.0206013603 7.973329e-01 8.706688e-01 9 128626307 128626390 84 + 0.142 0.189 0.494
ENSG00000197694 E094 486.7480260 0.0014835433 3.499716e-17 1.590716e-15 9 128626391 128626510 120 + 2.515 2.741 0.752
ENSG00000197694 E095 652.9345393 0.0011335626 1.723722e-26 2.137133e-24 9 128626511 128626687 177 + 2.627 2.874 0.822
ENSG00000197694 E096 1.2136029 0.0108647759 5.009411e-01 6.371514e-01 9 128627000 128627175 176 + 0.249 0.374 0.818
ENSG00000197694 E097 560.6627906 0.0018557428 3.542990e-15 1.246673e-13 9 128627386 128627494 109 + 2.582 2.801 0.727
ENSG00000197694 E098 279.1279832 0.0029037228 6.414429e-09 8.203013e-08 9 128627495 128627498 4 + 2.285 2.497 0.709
ENSG00000197694 E099 16.2320463 0.0011999297 3.779852e-01 5.222906e-01 9 128627499 128627924 426 + 1.163 1.247 0.297
ENSG00000197694 E100 306.1851419 0.0029754222 6.469463e-12 1.388648e-10 9 128627925 128627942 18 + 2.297 2.546 0.830
ENSG00000197694 E101 63.7479007 0.0003961381 6.512165e-06 4.517265e-05 9 128627943 128629043 1101 + 1.903 1.710 -0.653
ENSG00000197694 E102 10.1301798 0.0016754489 1.263276e-01 2.290342e-01 9 128629125 128629186 62 + 1.114 0.964 -0.551
ENSG00000197694 E103 6.7399706 0.0025258974 4.101727e-01 5.537731e-01 9 128629187 128629187 1 + 0.922 0.829 -0.359
ENSG00000197694 E104 24.1661578 0.0011560934 2.035479e-01 3.306512e-01 9 128629188 128629494 307 + 1.437 1.354 -0.288
ENSG00000197694 E105 56.0403193 0.0004134103 2.322339e-01 3.650909e-01 9 128629660 128630320 661 + 1.769 1.719 -0.169
ENSG00000197694 E106 470.6122067 0.0031843890 5.355010e-10 8.346968e-09 9 128630321 128630375 55 + 2.511 2.724 0.710
ENSG00000197694 E107 2.2217726 0.0074805763 4.709248e-03 1.512277e-02 9 128630419 128630574 156 + 0.721 0.260 -2.378
ENSG00000197694 E108 1.3576442 0.2241412992 8.213811e-01 8.873945e-01 9 128631608 128631796 189 + 0.406 0.365 -0.230
ENSG00000197694 E109 3.1667974 0.0049218853 5.112729e-01 6.463264e-01 9 128631797 128632019 223 + 0.522 0.632 0.497
ENSG00000197694 E110 3.3098923 0.0642151440 3.206626e-01 4.638181e-01 9 128632020 128632126 107 + 0.468 0.666 0.907
ENSG00000197694 E111 828.4324540 0.0044750912 4.157746e-11 7.818865e-10 9 128632127 128632323 197 + 2.735 2.977 0.804
ENSG00000197694 E112 465.4458959 0.0045194576 3.490245e-13 9.186113e-12 9 128632431 128632484 54 + 2.452 2.737 0.949
ENSG00000197694 E113 522.5018627 0.0057842175 1.445752e-11 2.933419e-10 9 128632572 128632624 53 + 2.499 2.789 0.964
ENSG00000197694 E114 556.3015686 0.0061547980 9.952439e-12 2.073757e-10 9 128632625 128632685 61 + 2.520 2.818 0.991
ENSG00000197694 E115 514.9343078 0.0061682010 3.195381e-12 7.222088e-11 9 128632686 128632718 33 + 2.479 2.787 1.024
ENSG00000197694 E116 4.5800625 0.0612188490 5.947613e-01 7.169447e-01 9 128632719 128632807 89 + 0.652 0.757 0.435
ENSG00000197694 E117 837.2526398 0.0065721947 1.057590e-16 4.535023e-15 9 128632808 128632955 148 + 2.648 3.009 1.199
ENSG00000197694 E118 3.6694189 0.0090739785 1.450932e-01 2.549669e-01 9 128632956 128633190 235 + 0.781 0.572 -0.885
ENSG00000197694 E119 469.6509664 0.0086756367 2.933143e-13 7.804426e-12 9 128633209 128633227 19 + 2.386 2.761 1.248
ENSG00000197694 E120 1001.6497739 0.0101194328 1.747437e-14 5.559260e-13 9 128633228 128633662 435 + 2.694 3.095 1.334