ENSG00000197603

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000508244 ENSG00000197603 HEK293_OSMI2_2hA HEK293_TMG_2hB CPLANE1 protein_coding protein_coding 2.916221 0.9319213 4.607045 0.1205038 0.2509013 2.293291 0.38682331 0.06278227 0.7414866 0.04749425 0.17337319 3.3680885 0.12572917 0.05916667 0.15880000 0.09963333 0.20785592 0.01309886 FALSE TRUE
ENST00000514429 ENSG00000197603 HEK293_OSMI2_2hA HEK293_TMG_2hB CPLANE1 protein_coding protein_coding 2.916221 0.9319213 4.607045 0.1205038 0.2509013 2.293291 0.33121136 0.06220696 0.6794918 0.05115537 0.07833844 3.2553236 0.09392917 0.06833333 0.14650000 0.07816667 0.34286424 0.01309886 FALSE TRUE
ENST00000651892 ENSG00000197603 HEK293_OSMI2_2hA HEK293_TMG_2hB CPLANE1 protein_coding protein_coding 2.916221 0.9319213 4.607045 0.1205038 0.2509013 2.293291 0.07609892 0.07935419 0.0000000 0.05288605 0.00000000 -3.1595353 0.03969167 0.09370000 0.00000000 -0.09370000 0.04047631 0.01309886 FALSE TRUE
ENST00000676160 ENSG00000197603 HEK293_OSMI2_2hA HEK293_TMG_2hB CPLANE1 protein_coding retained_intron 2.916221 0.9319213 4.607045 0.1205038 0.2509013 2.293291 0.24570025 0.18356889 0.3490968 0.05413099 0.02632483 0.8915258 0.11377083 0.19933333 0.07693333 -0.12240000 0.12587302 0.01309886 FALSE TRUE
MSTRG.26085.1 ENSG00000197603 HEK293_OSMI2_2hA HEK293_TMG_2hB CPLANE1 protein_coding   2.916221 0.9319213 4.607045 0.1205038 0.2509013 2.293291 0.79762512 0.40199424 0.9914506 0.07510088 0.15169054 1.2813952 0.32357500 0.42576667 0.21290000 -0.21286667 0.02360667 0.01309886 TRUE TRUE
MSTRG.26085.2 ENSG00000197603 HEK293_OSMI2_2hA HEK293_TMG_2hB CPLANE1 protein_coding   2.916221 0.9319213 4.607045 0.1205038 0.2509013 2.293291 0.61975095 0.04870231 1.2218434 0.02541307 0.15360878 4.3912577 0.16017500 0.05140000 0.27056667 0.21916667 0.01309886 0.01309886 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000197603 E001 2.3950448 0.0060546848 2.165264e-01 3.462181e-01 5 37068196 37068224 29 - 0.388 0.627 1.164
ENSG00000197603 E002 8.9182085 0.0056457855 7.236015e-03 2.183668e-02 5 37079593 37079821 229 - 0.796 1.144 1.302
ENSG00000197603 E003 3.9158326 0.0103380246 2.909097e-02 7.017773e-02 5 37099342 37099455 114 - 0.509 0.873 1.534
ENSG00000197603 E004 0.1472490 0.0429678175 1.000000e+00   5 37106228 37106234 7 - 0.054 0.000 -9.859
ENSG00000197603 E005 0.7760110 0.0161103209 1.617762e-01 2.774405e-01 5 37106235 37106318 84 - 0.144 0.417 2.037
ENSG00000197603 E006 13.5805260 0.0013028819 4.981658e-06 3.546904e-05 5 37106319 37106977 659 - 0.921 1.388 1.674
ENSG00000197603 E007 23.1966010 0.0217343789 3.580879e-04 1.611408e-03 5 37106978 37107605 628 - 1.162 1.547 1.340
ENSG00000197603 E008 17.0870333 0.0097760588 2.127228e-04 1.018518e-03 5 37107606 37107778 173 - 1.045 1.428 1.354
ENSG00000197603 E009 21.9814245 0.0016056483 1.056012e-04 5.477899e-04 5 37108293 37108471 179 - 1.162 1.501 1.184
ENSG00000197603 E010 15.6696601 0.0365951792 3.577322e-03 1.194776e-02 5 37114960 37115049 90 - 1.012 1.389 1.337
ENSG00000197603 E011 10.8863562 0.0329358259 2.061008e-02 5.276874e-02 5 37120216 37120261 46 - 0.885 1.213 1.200
ENSG00000197603 E012 15.9839725 0.0011629486 5.432032e-02 1.168071e-01 5 37120262 37120340 79 - 1.065 1.273 0.743
ENSG00000197603 E013 25.2888195 0.0079311770 2.970585e-03 1.017536e-02 5 37121617 37121784 168 - 1.237 1.512 0.955
ENSG00000197603 E014 6.3025532 0.0031776033 4.517329e-02 1.005102e-01 5 37121785 37122429 645 - 0.795 0.418 -1.699
ENSG00000197603 E015 16.3833942 0.0203567951 2.649383e-02 6.493702e-02 5 37122430 37122488 59 - 1.060 1.328 0.952
ENSG00000197603 E016 0.1451727 0.0436281748 1.000000e+00   5 37124746 37124870 125 - 0.053 0.000 -9.859
ENSG00000197603 E017 0.1451727 0.0436281748 1.000000e+00   5 37124871 37125013 143 - 0.053 0.000 -9.859
ENSG00000197603 E018 0.0000000       5 37125014 37125243 230 -      
ENSG00000197603 E019 25.4599780 0.0204210173 4.443005e-02 9.916518e-02 5 37125244 37125409 166 - 1.250 1.470 0.768
ENSG00000197603 E020 0.0000000       5 37125410 37125440 31 -      
ENSG00000197603 E021 0.0000000       5 37125441 37126062 622 -      
ENSG00000197603 E022 0.0000000       5 37138686 37138701 16 -      
ENSG00000197603 E023 0.0000000       5 37138702 37138719 18 -      
ENSG00000197603 E024 16.4365071 0.0012854402 8.209458e-01 8.871317e-01 5 37138720 37138788 69 - 1.107 1.144 0.132
ENSG00000197603 E025 13.1419954 0.0016035504 8.021738e-02 1.598887e-01 5 37138789 37138848 60 - 0.985 1.192 0.749
ENSG00000197603 E026 8.9230291 0.0023115568 4.258718e-02 9.579469e-02 5 37139340 37139370 31 - 0.822 1.090 1.004
ENSG00000197603 E027 2.2090766 0.0069529050 6.152454e-02 1.291970e-01 5 37139371 37142309 2939 - 0.472 0.000 -13.239
ENSG00000197603 E028 16.3602979 0.0012966136 3.047829e-01 4.468123e-01 5 37142310 37142480 171 - 1.094 1.214 0.428
ENSG00000197603 E029 0.0000000       5 37142481 37142641 161 -      
ENSG00000197603 E030 12.0079498 0.0014743129 9.931176e-01 9.998308e-01 5 37148181 37148268 88 - 0.985 0.995 0.039
ENSG00000197603 E031 13.5076448 0.0013664489 2.754633e-01 4.147680e-01 5 37153740 37153860 121 - 1.008 1.144 0.495
ENSG00000197603 E032 7.8599705 0.0021128681 4.741290e-01 6.129826e-01 5 37153861 37153904 44 - 0.805 0.918 0.436
ENSG00000197603 E033 12.5052938 0.0014698873 1.677331e-01 2.852472e-01 5 37153905 37153993 89 - 0.973 1.144 0.623
ENSG00000197603 E034 5.2625076 0.0030851083 5.929964e-01 7.154591e-01 5 37157313 37157420 108 - 0.669 0.767 0.401
ENSG00000197603 E035 13.6879312 0.0324698648 3.724683e-01 5.169327e-01 5 37157670 37157814 145 - 1.020 1.146 0.458
ENSG00000197603 E036 8.1872304 0.0021038484 4.885405e-01 6.260852e-01 5 37157815 37157868 54 - 0.863 0.767 -0.377
ENSG00000197603 E037 0.0000000       5 37157869 37157932 64 -      
ENSG00000197603 E038 15.3971469 0.0517499380 7.639497e-01 8.471451e-01 5 37158224 37158345 122 - 1.090 1.069 -0.076
ENSG00000197603 E039 14.4181246 0.0189791809 7.211204e-01 8.155942e-01 5 37162465 37162566 102 - 1.066 1.032 -0.123
ENSG00000197603 E040 0.3686942 0.0277823285 1.956433e-01 3.207685e-01 5 37162567 37162713 147 - 0.054 0.258 2.626
ENSG00000197603 E041 0.4470576 0.0216240667 3.763733e-01 5.207053e-01 5 37162714 37164272 1559 - 0.101 0.257 1.621
ENSG00000197603 E042 7.6583596 0.0286615222 6.852164e-01 7.880205e-01 5 37164273 37164327 55 - 0.831 0.768 -0.248
ENSG00000197603 E043 0.7771569 0.0153787590 7.197032e-01 8.144510e-01 5 37164328 37165538 1211 - 0.183 0.257 0.623
ENSG00000197603 E044 14.4807243 0.0012763360 1.446294e-01 2.543306e-01 5 37165539 37165671 133 - 1.094 0.917 -0.650
ENSG00000197603 E045 19.5573384 0.0106210067 1.134660e-01 2.105800e-01 5 37167047 37167213 167 - 1.213 1.030 -0.660
ENSG00000197603 E046 34.8539343 0.0200482869 7.943079e-01 8.685821e-01 5 37168791 37169170 380 - 1.431 1.416 -0.050
ENSG00000197603 E047 11.1858088 0.0451433279 6.344271e-01 7.488923e-01 5 37169171 37169194 24 - 0.979 0.917 -0.231
ENSG00000197603 E048 26.6074949 0.0007573285 6.746639e-01 7.801280e-01 5 37169195 37169531 337 - 1.318 1.292 -0.092
ENSG00000197603 E049 6.4115836 0.0026637387 3.518851e-01 4.960936e-01 5 37169532 37169561 30 - 0.777 0.626 -0.625
ENSG00000197603 E050 17.4465573 0.0036497066 2.390255e-01 3.729833e-01 5 37170041 37170331 291 - 1.158 1.030 -0.463
ENSG00000197603 E051 12.5861555 0.0132139046 2.334075e-01 3.664495e-01 5 37173755 37173947 193 - 1.035 0.873 -0.605
ENSG00000197603 E052 9.2285451 0.0139446374 3.218381e-01 4.650958e-01 5 37175909 37175986 78 - 0.914 0.767 -0.572
ENSG00000197603 E053 0.0000000       5 37175987 37176099 113 -      
ENSG00000197603 E054 10.5321433 0.0016563499 6.210411e-02 1.301774e-01 5 37177621 37177700 80 - 0.979 0.702 -1.077
ENSG00000197603 E055 9.0364977 0.0018748918 1.992105e-02 5.132228e-02 5 37179361 37179440 80 - 0.928 0.534 -1.625
ENSG00000197603 E056 3.7548577 0.0071407139 3.368626e-01 4.807208e-01 5 37179441 37179443 3 - 0.604 0.418 -0.900
ENSG00000197603 E057 0.2998086 0.0304236231 1.957734e-01   5 37179444 37179906 463 - 0.054 0.257 2.620
ENSG00000197603 E058 10.3534456 0.0015991164 6.834976e-02 1.406438e-01 5 37180017 37180183 167 - 0.973 0.702 -1.055
ENSG00000197603 E059 11.9597374 0.0112076866 2.739389e-03 9.490846e-03 5 37180857 37181005 149 - 1.046 0.534 -2.061
ENSG00000197603 E060 42.2031270 0.0005632018 9.272710e-07 7.749634e-06 5 37182760 37183699 940 - 1.556 1.118 -1.531
ENSG00000197603 E061 17.2989605 0.0010404478 4.030914e-04 1.786512e-03 5 37184788 37185079 292 - 1.192 0.702 -1.850
ENSG00000197603 E062 11.8388237 0.0014881147 1.945894e-03 7.058896e-03 5 37186286 37186394 109 - 1.040 0.534 -2.040
ENSG00000197603 E063 13.3921941 0.0012836648 2.470948e-03 8.676483e-03 5 37187414 37187572 159 - 1.084 0.626 -1.786
ENSG00000197603 E064 7.4801075 0.0022088088 2.469829e-03 8.673520e-03 5 37187733 37187842 110 - 0.871 0.257 -2.992
ENSG00000197603 E065 0.4448795 0.6874380451 3.627939e-02 8.411996e-02 5 37195666 37195857 192 - 0.000 0.513 13.383
ENSG00000197603 E066 8.1200318 0.0031310065 3.627106e-02 8.410374e-02 5 37195858 37195996 139 - 0.893 0.534 -1.493
ENSG00000197603 E067 8.9339082 0.0025035866 7.089048e-02 1.448196e-01 5 37198702 37198866 165 - 0.914 0.627 -1.158
ENSG00000197603 E068 10.3159690 0.0016385750 2.717816e-02 6.635505e-02 5 37201591 37201808 218 - 0.973 0.627 -1.377
ENSG00000197603 E069 0.0000000       5 37205194 37205218 25 -      
ENSG00000197603 E070 0.3030308 0.3609956214 1.000000e+00   5 37205219 37205314 96 - 0.102 0.000 -10.621
ENSG00000197603 E071 10.8026813 0.0015682494 1.756503e-02 4.618710e-02 5 37205315 37205454 140 - 0.996 0.626 -1.465
ENSG00000197603 E072 9.6752510 0.0032223263 3.884317e-02 8.889277e-02 5 37206197 37206296 100 - 0.954 0.626 -1.308
ENSG00000197603 E073 9.8516568 0.0044558592 2.056898e-01 3.332819e-01 5 37206297 37206425 129 - 0.948 0.767 -0.700
ENSG00000197603 E074 9.6761930 0.0304392962 3.058027e-01 4.479426e-01 5 37213559 37213732 174 - 0.935 0.768 -0.647
ENSG00000197603 E075 8.8431495 0.0018583182 3.686289e-01 5.130372e-01 5 37221324 37221488 165 - 0.893 0.767 -0.492
ENSG00000197603 E076 9.4980365 0.0018501410 4.833388e-01 6.213456e-01 5 37224253 37224333 81 - 0.914 0.823 -0.351
ENSG00000197603 E077 14.9487075 0.0012342688 3.666159e-01 5.109628e-01 5 37224532 37224740 209 - 1.094 0.995 -0.360
ENSG00000197603 E078 33.0785754 0.0006548094 3.231856e-01 4.665092e-01 5 37226304 37227073 770 - 1.414 1.343 -0.246
ENSG00000197603 E079 13.9272992 0.0017622887 9.733503e-01 9.873515e-01 5 37227243 37227392 150 - 1.045 1.061 0.057
ENSG00000197603 E080 11.9602970 0.0014688929 7.023175e-01 8.011557e-01 5 37227568 37227817 250 - 0.996 0.958 -0.142
ENSG00000197603 E081 0.2214452 0.0363091796 6.115776e-02   5 37230662 37230718 57 - 0.000 0.258 13.283
ENSG00000197603 E082 6.4942108 0.0042885348 6.735641e-01 7.792155e-01 5 37230867 37231049 183 - 0.747 0.823 0.301
ENSG00000197603 E083 6.7063091 0.0063135539 3.014944e-01 4.433089e-01 5 37238857 37238960 104 - 0.796 0.627 -0.698
ENSG00000197603 E084 9.9642506 0.0087673898 3.883680e-01 5.324473e-01 5 37239713 37239869 157 - 0.941 0.823 -0.454
ENSG00000197603 E085 0.0000000       5 37239870 37240564 695 -      
ENSG00000197603 E086 7.6975233 0.0463584732 9.594811e-01 9.785654e-01 5 37243013 37243119 107 - 0.822 0.825 0.010
ENSG00000197603 E087 12.3717402 0.0015964544 8.487857e-01 9.061288e-01 5 37244375 37244607 233 - 1.008 0.995 -0.047
ENSG00000197603 E088 10.6702948 0.0016201139 1.961036e-02 5.065202e-02 5 37245479 37245598 120 - 0.991 0.626 -1.443
ENSG00000197603 E089 7.8257347 0.0055613069 1.342535e-02 3.690568e-02 5 37245710 37245845 136 - 0.878 0.418 -2.020
ENSG00000197603 E090 5.7021809 0.0028627321 2.247888e-01 3.561798e-01 5 37247618 37247745 128 - 0.747 0.534 -0.922
ENSG00000197603 E091 0.0000000       5 37247746 37247792 47 -      
ENSG00000197603 E092 3.9222797 0.0040511526 6.786057e-01 7.830324e-01 5 37248846 37249244 399 - 0.604 0.534 -0.316
ENSG00000197603 E093 4.8597959 0.0606917029 8.382942e-01 8.989004e-01 5 37249245 37249376 132 - 0.656 0.702 0.190