• ENSG00000197024
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000197024

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000426851 ENSG00000197024 HEK293_OSMI2_2hA HEK293_TMG_2hB ZNF398 protein_coding protein_coding 10.97121 11.06981 11.91494 0.386519 0.09025654 0.1060485 1.347877 1.265317 1.3651849 0.11646310 0.2251903 0.1087695 0.1349625 0.1141667 0.11480000 0.0006333333 1.000000000 0.001271694 FALSE TRUE
ENST00000475153 ENSG00000197024 HEK293_OSMI2_2hA HEK293_TMG_2hB ZNF398 protein_coding protein_coding 10.97121 11.06981 11.91494 0.386519 0.09025654 0.1060485 5.904831 3.651033 8.5592642 0.69439226 0.3810375 1.2269205 0.5313667 0.3347667 0.71850000 0.3837333333 0.001271694 0.001271694 FALSE TRUE
MSTRG.30896.3 ENSG00000197024 HEK293_OSMI2_2hA HEK293_TMG_2hB ZNF398 protein_coding   10.97121 11.06981 11.91494 0.386519 0.09025654 0.1060485 2.080107 4.335780 0.1574943 0.47968816 0.1574943 -4.6974315 0.1844625 0.3896667 0.01333333 -0.3763333333 0.002168107 0.001271694 FALSE TRUE
MSTRG.30896.4 ENSG00000197024 HEK293_OSMI2_2hA HEK293_TMG_2hB ZNF398 protein_coding   10.97121 11.06981 11.91494 0.386519 0.09025654 0.1060485 1.053780 1.069584 1.5835488 0.04905542 0.4015441 0.5617672 0.0955125 0.0966000 0.13256667 0.0359666667 0.739822480 0.001271694 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000197024 E001 3.3328751 0.0305374838 6.292958e-01 7.446855e-01 7 149126416 149126463 48 + 0.573 0.711 0.594
ENSG00000197024 E002 8.7589337 0.0023565086 4.932798e-01 6.303014e-01 7 149126464 149126655 192 + 0.920 1.058 0.513
ENSG00000197024 E003 3.8581128 0.0515942053 1.103417e-02 3.124463e-02 7 149127097 149127125 29 + 0.346 0.846 2.304
ENSG00000197024 E004 4.6459847 0.0241536691 4.699089e-01 6.091320e-01 7 149128823 149128944 122 + 0.769 0.716 -0.216
ENSG00000197024 E005 0.5181333 0.0207120964 5.536537e-01 6.827581e-01 7 149147012 149147107 96 + 0.207 0.130 -0.806
ENSG00000197024 E006 4.3009993 0.0044513338 7.342939e-02 1.490116e-01 7 149147108 149147242 135 + 0.812 0.616 -0.807
ENSG00000197024 E007 32.1722424 0.0088571137 2.408527e-07 2.273144e-06 7 149147453 149147766 314 + 1.655 1.321 -1.146
ENSG00000197024 E008 0.1482932 0.0411569638 4.986322e-01   7 149148127 149148283 157 + 0.000 0.129 9.569
ENSG00000197024 E009 0.0000000       7 149148403 149148516 114 +      
ENSG00000197024 E010 0.3299976 0.0274424043 2.080214e-01   7 149151207 149151282 76 + 0.000 0.229 10.727
ENSG00000197024 E011 124.3302813 0.0020741326 3.249912e-07 2.984855e-06 7 149153945 149154317 373 + 2.155 2.034 -0.404
ENSG00000197024 E012 34.6100195 0.0006992286 1.483876e-02 4.012616e-02 7 149154318 149154340 23 + 1.592 1.518 -0.251
ENSG00000197024 E013 73.0756223 0.0024590185 4.128796e-04 1.823792e-03 7 149166158 149166284 127 + 1.919 1.826 -0.313
ENSG00000197024 E014 76.6174116 0.0031907981 4.879767e-02 1.070221e-01 7 149166817 149166930 114 + 1.904 1.881 -0.078
ENSG00000197024 E015 78.4294627 0.0003567610 1.209724e-01 2.213303e-01 7 149176468 149176581 114 + 1.896 1.905 0.030
ENSG00000197024 E016 1448.1372813 0.0034618809 9.554322e-08 9.737143e-07 7 149178648 149183042 4395 + 3.100 3.212 0.373