ENSG00000196924

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000360319 ENSG00000196924 HEK293_OSMI2_2hA HEK293_TMG_2hB FLNA protein_coding protein_coding 145.0673 259.1586 63.05169 11.88389 4.603929 -2.039055 14.945689 23.36131 9.4074105 3.367808 0.8662994 -1.311336 0.11771250 0.09003333 0.149700000 0.05966667 5.744451e-02 6.652522e-12 FALSE TRUE
ENST00000369856 ENSG00000196924 HEK293_OSMI2_2hA HEK293_TMG_2hB FLNA protein_coding protein_coding 145.0673 259.1586 63.05169 11.88389 4.603929 -2.039055 57.439459 81.88928 29.6436061 12.525783 0.4037755 -1.465643 0.43829167 0.31493333 0.475800000 0.16086667 1.154840e-01 6.652522e-12 FALSE TRUE
ENST00000444578 ENSG00000196924 HEK293_OSMI2_2hA HEK293_TMG_2hB FLNA protein_coding protein_coding 145.0673 259.1586 63.05169 11.88389 4.603929 -2.039055 21.078089 46.17526 3.4934056 2.719295 1.8742052 -3.720602 0.11367917 0.17793333 0.052366667 -0.12556667 4.778768e-01 6.652522e-12 FALSE FALSE
ENST00000498491 ENSG00000196924 HEK293_OSMI2_2hA HEK293_TMG_2hB FLNA protein_coding processed_transcript 145.0673 259.1586 63.05169 11.88389 4.603929 -2.039055 9.705858 33.33423 0.2578135 9.302930 0.2578135 -6.960065 0.04068750 0.13006667 0.003566667 -0.12650000 6.161187e-03 6.652522e-12 FALSE FALSE
ENST00000678304 ENSG00000196924 HEK293_OSMI2_2hA HEK293_TMG_2hB FLNA protein_coding retained_intron 145.0673 259.1586 63.05169 11.88389 4.603929 -2.039055 13.497803 39.82875 0.3930048 7.012445 0.1726500 -6.627232 0.05726250 0.15406667 0.005933333 -0.14813333 6.652522e-12 6.652522e-12 TRUE TRUE
MSTRG.35102.17 ENSG00000196924 HEK293_OSMI2_2hA HEK293_TMG_2hB FLNA protein_coding   145.0673 259.1586 63.05169 11.88389 4.603929 -2.039055 10.123800 14.32269 6.1541381 1.386308 3.4174657 -1.217339 0.07830833 0.05540000 0.091766667 0.03636667 1.000000e+00 6.652522e-12 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000196924 E001 0.1482932 4.228390e-02 1.000000e+00   X 154348524 154348528 5 - 0.000 0.069 8.752
ENSG00000196924 E002 0.6997360 1.684752e-02 3.345581e-01 4.783005e-01 X 154348529 154348529 1 - 0.000 0.227 10.645
ENSG00000196924 E003 0.8480291 1.503807e-02 2.319517e-01 3.647715e-01 X 154348530 154348530 1 - 0.000 0.269 10.966
ENSG00000196924 E004 7.2114586 1.980146e-02 1.270202e-02 3.521261e-02 X 154348531 154348534 4 - 0.455 0.884 1.845
ENSG00000196924 E005 27.6223661 7.026800e-03 4.676994e-03 1.503181e-02 X 154348535 154348554 20 - 1.125 1.390 0.932
ENSG00000196924 E006 323.2455720 1.775461e-04 3.060858e-41 1.143728e-38 X 154348555 154348647 93 - 2.059 2.449 1.304
ENSG00000196924 E007 415.9003374 2.586073e-04 3.942557e-33 8.345315e-31 X 154348648 154348674 27 - 2.255 2.550 0.983
ENSG00000196924 E008 457.2824436 1.443526e-04 8.596137e-32 1.623642e-29 X 154348675 154348690 16 - 2.324 2.587 0.876
ENSG00000196924 E009 1187.8320789 3.151147e-03 1.253671e-29 2.038256e-27 X 154348691 154348830 140 - 2.664 3.014 1.163
ENSG00000196924 E010 1203.3836991 6.477750e-03 1.031463e-15 3.886389e-14 X 154348831 154348919 89 - 2.687 3.018 1.100
ENSG00000196924 E011 704.2679209 1.064195e-02 4.404410e-08 4.801693e-07 X 154348920 154348921 2 - 2.494 2.781 0.958
ENSG00000196924 E012 1615.0296200 6.609716e-03 9.268937e-19 5.141940e-17 X 154348922 154349036 115 - 2.787 3.149 1.205
ENSG00000196924 E013 2345.0167716 6.203004e-03 3.722610e-17 1.686364e-15 X 154349362 154349565 204 - 2.983 3.307 1.076
ENSG00000196924 E014 1207.8024237 7.660407e-03 9.637776e-10 1.433386e-08 X 154349649 154349671 23 - 2.747 3.013 0.887
ENSG00000196924 E015 2455.9769942 7.267153e-03 2.733680e-09 3.742232e-08 X 154349672 154349867 196 - 3.079 3.318 0.795
ENSG00000196924 E016 27.7830013 7.364850e-04 6.244499e-01 7.407545e-01 X 154349868 154350030 163 - 1.399 1.341 -0.201
ENSG00000196924 E017 2259.5179398 4.809213e-03 6.450335e-11 1.173981e-09 X 154350031 154350207 177 - 3.062 3.279 0.720
ENSG00000196924 E018 86.1103029 3.695736e-03 8.809072e-11 1.569650e-09 X 154350208 154350908 701 - 2.080 1.737 -1.152
ENSG00000196924 E019 1835.5790381 1.983373e-03 1.375186e-13 3.832938e-12 X 154350909 154351041 133 - 3.016 3.182 0.553
ENSG00000196924 E020 31.9572377 1.334268e-03 9.928427e-09 1.225269e-07 X 154351042 154351139 98 - 1.697 1.295 -1.379
ENSG00000196924 E021 78.5407160 3.491807e-04 3.923763e-24 3.943476e-22 X 154351140 154351580 441 - 2.112 1.664 -1.507
ENSG00000196924 E022 1635.9575524 7.743550e-04 3.733702e-17 1.690984e-15 X 154351581 154351696 116 - 2.992 3.127 0.447
ENSG00000196924 E023 15.1346815 3.029243e-02 5.136321e-07 4.532821e-06 X 154351728 154351883 156 - 1.527 0.911 -2.191
ENSG00000196924 E024 1262.7873627 2.936090e-04 6.634465e-24 6.525855e-22 X 154351884 154351950 67 - 2.873 3.013 0.465
ENSG00000196924 E025 1273.5308551 1.318907e-03 1.969508e-17 9.265395e-16 X 154351951 154352021 71 - 2.848 3.024 0.584
ENSG00000196924 E026 2140.5408837 1.511883e-03 7.039438e-10 1.075484e-08 X 154352181 154352447 267 - 3.125 3.241 0.389
ENSG00000196924 E027 1.1835157 1.426701e-02 6.869593e-03 2.088685e-02 X 154352538 154352552 15 - 0.611 0.128 -3.165
ENSG00000196924 E028 1165.9044368 1.126567e-03 2.226408e-08 2.572652e-07 X 154352553 154352675 123 - 2.871 2.974 0.345
ENSG00000196924 E029 14.8833896 2.099690e-03 1.833799e-04 8.923680e-04 X 154352676 154352771 96 - 1.366 0.997 -1.314
ENSG00000196924 E030 899.9680081 2.293618e-04 5.161879e-13 1.325597e-11 X 154352772 154352816 45 - 2.755 2.859 0.346
ENSG00000196924 E031 1103.2683785 8.633612e-04 2.269047e-07 2.152981e-06 X 154352817 154352883 67 - 2.860 2.947 0.290
ENSG00000196924 E032 856.7622120 2.847102e-04 4.975852e-10 7.789936e-09 X 154352884 154352924 41 - 2.745 2.836 0.304
ENSG00000196924 E033 7.8791829 2.127719e-03 5.256512e-01 6.590015e-01 X 154352925 154353000 76 - 0.925 0.824 -0.386
ENSG00000196924 E034 1638.8265303 2.497845e-04 2.049610e-12 4.780750e-11 X 154353001 154353204 204 - 3.038 3.116 0.259
ENSG00000196924 E035 2.5766303 3.269533e-02 9.175079e-01 9.518842e-01 X 154353205 154353221 17 - 0.455 0.463 0.041
ENSG00000196924 E036 601.5562783 5.882581e-04 6.254144e-04 2.626358e-03 X 154353296 154353299 4 - 2.620 2.677 0.191
ENSG00000196924 E037 1379.2480335 5.180105e-04 2.583381e-05 1.561079e-04 X 154353300 154353457 158 - 2.986 3.038 0.174
ENSG00000196924 E038 1387.6978827 8.907835e-04 4.009662e-01 5.446309e-01 X 154353554 154353727 174 - 3.033 3.032 -0.002
ENSG00000196924 E039 1081.7190482 1.171315e-04 3.622923e-02 8.402115e-02 X 154353915 154354029 115 - 2.960 2.911 -0.161
ENSG00000196924 E040 589.1449703 1.143761e-04 9.921235e-02 1.892779e-01 X 154354030 154354043 14 - 2.698 2.648 -0.166
ENSG00000196924 E041 10.5142310 1.665333e-03 3.059041e-01 4.480434e-01 X 154354044 154354150 107 - 1.060 0.924 -0.506
ENSG00000196924 E042 1163.8110551 8.404965e-05 2.506187e-01 3.866774e-01 X 154354151 154354291 141 - 2.981 2.946 -0.116
ENSG00000196924 E043 889.0720920 1.247874e-04 5.345817e-01 6.666155e-01 X 154354381 154354483 103 - 2.846 2.836 -0.033
ENSG00000196924 E044 924.8548200 1.114297e-04 3.559179e-03 1.189514e-02 X 154354616 154354711 96 - 2.832 2.857 0.084
ENSG00000196924 E045 1561.4523037 6.557181e-04 5.434782e-01 6.740967e-01 X 154354825 154355072 248 - 3.104 3.078 -0.084
ENSG00000196924 E046 469.7599841 2.206462e-03 2.472258e-02 6.130695e-02 X 154357251 154357274 24 - 2.627 2.545 -0.274
ENSG00000196924 E047 961.1470355 2.540210e-03 9.743748e-03 2.813308e-02 X 154357434 154357540 107 - 2.942 2.856 -0.287
ENSG00000196924 E048 964.6961308 9.003820e-04 2.801638e-03 9.679961e-03 X 154357541 154357623 83 - 2.934 2.858 -0.251
ENSG00000196924 E049 1136.8481648 7.027583e-05 5.114421e-06 3.631875e-05 X 154358199 154358355 157 - 3.006 2.927 -0.264
ENSG00000196924 E050 971.6495249 1.638845e-03 6.706493e-02 1.384829e-01 X 154358445 154358568 124 - 2.925 2.866 -0.197
ENSG00000196924 E051 5.5596506 4.991941e-02 1.334189e-02 3.671622e-02 X 154358569 154358664 96 - 1.011 0.600 -1.634
ENSG00000196924 E052 789.5343739 1.389996e-03 4.424970e-03 1.433207e-02 X 154358984 154359088 105 - 2.853 2.771 -0.273
ENSG00000196924 E053 630.1328796 9.236018e-04 2.077286e-02 5.310829e-02 X 154359089 154359150 62 - 2.743 2.675 -0.227
ENSG00000196924 E054 360.0166989 1.007682e-03 2.145853e-04 1.026605e-03 X 154359151 154359154 4 - 2.537 2.420 -0.387
ENSG00000196924 E055 938.0171120 2.478796e-03 3.942155e-03 1.297999e-02 X 154359246 154359406 161 - 2.937 2.844 -0.309
ENSG00000196924 E056 885.5185917 3.442420e-03 4.884498e-03 1.560856e-02 X 154359484 154359646 163 - 2.919 2.817 -0.339
ENSG00000196924 E057 948.5543130 3.355312e-03 8.932483e-05 4.718207e-04 X 154359732 154359905 174 - 2.974 2.840 -0.446
ENSG00000196924 E058 1640.8521022 5.936720e-03 1.341601e-02 3.688215e-02 X 154359990 154360587 598 - 3.189 3.086 -0.343
ENSG00000196924 E059 384.2546003 1.038013e-02 1.190801e-01 2.186346e-01 X 154361308 154361354 47 - 2.548 2.458 -0.299
ENSG00000196924 E060 872.4976054 4.947167e-03 7.752690e-05 4.163640e-04 X 154361355 154361570 216 - 2.955 2.798 -0.519
ENSG00000196924 E061 725.9123709 7.190486e-03 1.021220e-06 8.452775e-06 X 154361670 154361787 118 - 2.925 2.701 -0.745
ENSG00000196924 E062 904.6898500 7.619600e-03 4.683346e-07 4.166451e-06 X 154361979 154362148 170 - 3.028 2.794 -0.779
ENSG00000196924 E063 638.1113646 7.716974e-03 1.695141e-06 1.339755e-05 X 154362242 154362332 91 - 2.873 2.644 -0.762
ENSG00000196924 E064 742.8889965 6.508520e-03 1.354236e-06 1.093403e-05 X 154362418 154362578 161 - 2.926 2.714 -0.706
ENSG00000196924 E065 640.5894771 4.703796e-03 1.303681e-06 1.056231e-05 X 154362661 154362784 124 - 2.847 2.655 -0.636
ENSG00000196924 E066 685.6056108 7.126414e-03 1.082958e-06 8.922853e-06 X 154364022 154364165 144 - 2.902 2.676 -0.751
ENSG00000196924 E067 619.2685765 7.685784e-03 4.432358e-07 3.961956e-06 X 154364259 154364372 114 - 2.868 2.628 -0.800
ENSG00000196924 E068 550.0012473 7.278549e-03 3.817254e-07 3.455667e-06 X 154364526 154364631 106 - 2.814 2.577 -0.788
ENSG00000196924 E069 508.5245731 5.608151e-03 1.096551e-08 1.341892e-07 X 154364632 154364719 88 - 2.783 2.541 -0.806
ENSG00000196924 E070 2.2391848 7.266465e-03 5.010071e-01 6.372054e-01 X 154364720 154364820 101 - 0.540 0.406 -0.675
ENSG00000196924 E071 637.6337259 4.083121e-03 2.278770e-12 5.274182e-11 X 154364821 154364957 137 - 2.891 2.635 -0.852
ENSG00000196924 E072 636.2760960 3.411883e-03 1.424824e-15 5.277199e-14 X 154365136 154365257 122 - 2.900 2.629 -0.902
ENSG00000196924 E073 296.0606225 5.601545e-03 3.024850e-10 4.919296e-09 X 154365258 154365259 2 - 2.577 2.294 -0.943
ENSG00000196924 E074 469.8297822 6.013524e-03 3.758079e-11 7.118144e-10 X 154365349 154365435 87 - 2.781 2.493 -0.958
ENSG00000196924 E075 342.5460183 8.318232e-03 5.644225e-11 1.038284e-09 X 154365436 154365486 51 - 2.673 2.342 -1.103
ENSG00000196924 E076 3.6547443 4.463605e-03 2.872740e-04 1.328205e-03 X 154365745 154365801 57 - 0.955 0.406 -2.375
ENSG00000196924 E077 5.3196843 3.267148e-03 2.220601e-04 1.058223e-03 X 154365802 154366023 222 - 1.060 0.553 -2.026
ENSG00000196924 E078 486.4588591 1.198673e-02 5.199210e-08 5.586608e-07 X 154366024 154366224 201 - 2.813 2.501 -1.040
ENSG00000196924 E079 649.7984693 9.939190e-03 2.837759e-12 6.467817e-11 X 154366308 154366470 163 - 2.975 2.609 -1.218
ENSG00000196924 E080 509.3716614 5.701661e-03 2.330914e-17 1.083377e-15 X 154366562 154366639 78 - 2.862 2.506 -1.186
ENSG00000196924 E081 0.8815421 1.579592e-02 3.886319e-01 5.327056e-01 X 154366640 154366656 17 - 0.349 0.181 -1.259
ENSG00000196924 E082 597.9722391 6.896332e-03 1.403578e-14 4.528332e-13 X 154366732 154366850 119 - 2.925 2.580 -1.148
ENSG00000196924 E083 608.2351777 1.003308e-02 1.246850e-12 3.012524e-11 X 154367397 154367544 148 - 2.951 2.578 -1.241
ENSG00000196924 E084 425.9618945 1.364642e-02 8.108139e-10 1.222688e-08 X 154367641 154367738 98 - 2.800 2.422 -1.260
ENSG00000196924 E085 612.9994891 1.268556e-02 9.258250e-10 1.380952e-08 X 154367842 154368090 249 - 2.945 2.587 -1.191
ENSG00000196924 E086 589.3908337 1.519461e-02 3.805723e-09 5.066283e-08 X 154370873 154371361 489 - 2.937 2.565 -1.238
ENSG00000196924 E087 12.1695887 4.667522e-03 1.707621e-05 1.075656e-04 X 154374506 154374681 176 - 1.342 0.887 -1.646