ENSG00000183495

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000330386 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding protein_coding 15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 5.5556449 13.1976276 0.4040209 1.4889947 0.2137795 -4.9955238 0.28109583 0.61310000 0.04016667 -0.572933333 2.314915e-03 4.693111e-07 FALSE TRUE
ENST00000389561 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding protein_coding 15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.3535662 0.0000000 0.6520273 0.0000000 0.6520273 6.0488189 0.02867083 0.00000000 0.06316667 0.063166667 7.412556e-01 4.693111e-07 FALSE TRUE
MSTRG.8330.1 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.4865149 0.0000000 0.6215132 0.0000000 0.2609058 5.9807409 0.03860833 0.00000000 0.06203333 0.062033333 4.693111e-07 4.693111e-07 FALSE TRUE
MSTRG.8330.10 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 1.7155612 1.4300569 1.9169511 0.9050309 0.5384007 0.4201941 0.12122917 0.06913333 0.19213333 0.123000000 5.264778e-01 4.693111e-07 FALSE TRUE
MSTRG.8330.11 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.7366060 0.5506964 0.9981057 0.3089727 0.1603181 0.8463551 0.05795000 0.02490000 0.10020000 0.075300000 2.679233e-01 4.693111e-07 FALSE TRUE
MSTRG.8330.14 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.9868288 1.7873835 0.4507470 0.2419664 0.4507470 -1.9638515 0.06125417 0.08526667 0.04646667 -0.038800000 2.621188e-01 4.693111e-07 FALSE TRUE
MSTRG.8330.2 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.8112162 0.8929996 0.4737865 0.6221695 0.4737865 -0.9003548 0.05983750 0.04280000 0.04736667 0.004566667 7.119720e-01 4.693111e-07 FALSE TRUE
MSTRG.8330.3 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 1.2073439 0.6281189 1.8059834 0.6281189 0.4904402 1.5088538 0.08394167 0.02900000 0.17890000 0.149900000 8.524100e-02 4.693111e-07 FALSE TRUE
MSTRG.8330.4 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.4488748 0.0000000 1.0080415 0.0000000 0.5207737 6.6696525 0.04530417 0.00000000 0.10260000 0.102600000 1.205382e-01 4.693111e-07 FALSE TRUE
MSTRG.8330.9 ENSG00000183495 HEK293_OSMI2_2hA HEK293_TMG_2hB EP400 protein_coding   15.64293 21.63266 10.00721 1.806569 0.1791836 -1.111398 0.8819558 1.0909508 0.0000000 1.0909508 0.0000000 -6.7826062 0.05145833 0.04406667 0.00000000 -0.044066667 9.156988e-01 4.693111e-07 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

No results under this category.

Splicing

All exons whithin this gene region are shown and numbering below.

No results under this category.

Transcripts

All isoforms whithin this gene region are shown below.

No results under this category.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000183495 E001 0.3268771 0.0293905105 8.310878e-01   12 131949916 131949918 3 + 0.130 0.116 -0.189
ENSG00000183495 E002 0.9556391 0.0123907095 7.240036e-01 8.176568e-01 12 131949919 131949931 13 + 0.310 0.282 -0.190
ENSG00000183495 E003 1.2511813 0.0105101999 6.848584e-01 7.877180e-01 12 131949932 131949936 5 + 0.378 0.346 -0.191
ENSG00000183495 E004 1.8704801 0.0099796672 2.878946e-01 4.284294e-01 12 131949937 131949941 5 + 0.536 0.402 -0.676
ENSG00000183495 E005 2.5067307 0.0071798013 1.189423e-01 2.184239e-01 12 131949942 131949954 13 + 0.651 0.451 -0.927
ENSG00000183495 E006 3.9793452 0.0306929050 5.560377e-02 1.190144e-01 12 131949955 131949962 8 + 0.817 0.573 -1.019
ENSG00000183495 E007 4.9080176 0.0416062528 1.759050e-02 4.624638e-02 12 131949963 131949970 8 + 0.919 0.608 -1.259
ENSG00000183495 E008 7.7188974 0.0065466511 1.476353e-03 5.560562e-03 12 131949971 131950036 66 + 1.084 0.770 -1.188
ENSG00000183495 E009 8.6184104 0.0295372928 5.839408e-03 1.818906e-02 12 131960585 131960692 108 + 1.120 0.815 -1.137
ENSG00000183495 E010 29.3514036 0.0310978324 2.659151e-02 6.514356e-02 12 131960693 131961198 506 + 1.554 1.408 -0.499
ENSG00000183495 E011 71.2169612 0.0305974530 2.947120e-04 1.358351e-03 12 131961199 131961954 756 + 1.980 1.726 -0.856
ENSG00000183495 E012 9.1201108 0.0501617285 5.064457e-01 6.421050e-01 12 131963532 131963642 111 + 1.001 0.976 -0.091
ENSG00000183495 E013 7.9728249 0.0028624720 1.417981e-04 7.112696e-04 12 131979694 131979696 3 + 1.119 0.746 -1.411
ENSG00000183495 E014 39.4346887 0.0755294241 8.231914e-02 1.631715e-01 12 131979697 131979784 88 + 1.679 1.529 -0.509
ENSG00000183495 E015 14.2061405 0.0494459145 6.006633e-01 7.218682e-01 12 131979785 131979793 9 + 1.172 1.169 -0.012
ENSG00000183495 E016 26.6771053 0.0347233413 8.631865e-02 1.695101e-01 12 131981489 131981596 108 + 1.489 1.384 -0.363
ENSG00000183495 E017 64.1552119 0.0154692587 1.099803e-05 7.237541e-05 12 131982093 131982478 386 + 1.930 1.685 -0.825
ENSG00000183495 E018 65.4834672 0.0013147189 4.440153e-14 1.326563e-12 12 131986514 131986807 294 + 1.951 1.670 -0.946
ENSG00000183495 E019 66.7470022 0.0017097089 7.254224e-12 1.544668e-10 12 131987705 131987890 186 + 1.947 1.695 -0.850
ENSG00000183495 E020 69.4216457 0.0032307226 2.774944e-08 3.144920e-07 12 131989964 131990104 141 + 1.942 1.736 -0.696
ENSG00000183495 E021 55.8458229 0.0051166543 6.922821e-05 3.763110e-04 12 131990636 131990714 79 + 1.826 1.668 -0.536
ENSG00000183495 E022 55.2538608 0.0048030043 4.059762e-05 2.336158e-04 12 131991407 131991456 50 + 1.824 1.662 -0.550
ENSG00000183495 E023 54.1747158 0.0012815930 2.386506e-09 3.300361e-08 12 131992173 131992230 58 + 1.848 1.619 -0.775
ENSG00000183495 E024 80.4761309 0.0007236201 7.080817e-09 8.974640e-08 12 131994867 131994956 90 + 1.988 1.822 -0.560
ENSG00000183495 E025 0.4751703 0.0210378859 7.470121e-01 8.346360e-01 12 131994957 131995012 56 + 0.130 0.207 0.809
ENSG00000183495 E026 84.1929285 0.0095837256 1.084726e-04 5.610562e-04 12 132005077 132005184 108 + 2.006 1.850 -0.524
ENSG00000183495 E027 93.8790120 0.0077241385 1.261730e-05 8.191603e-05 12 132006112 132006302 191 + 2.055 1.891 -0.551
ENSG00000183495 E028 80.7070477 0.0041975432 1.478479e-07 1.453144e-06 12 132006700 132006877 178 + 2.002 1.814 -0.633
ENSG00000183495 E029 69.0717103 0.0024429304 3.120280e-06 2.325077e-05 12 132011498 132011634 137 + 1.917 1.765 -0.514
ENSG00000183495 E030 76.9945068 0.0109402443 1.278107e-03 4.904270e-03 12 132013009 132013178 170 + 1.956 1.826 -0.436
ENSG00000183495 E031 81.6014151 0.0067183101 2.855267e-03 9.839234e-03 12 132013490 132013664 175 + 1.957 1.868 -0.301
ENSG00000183495 E032 75.6613226 0.0004583473 3.442843e-04 1.557208e-03 12 132013777 132013913 137 + 1.917 1.839 -0.264
ENSG00000183495 E033 77.1609112 0.0013719705 2.573297e-04 1.205772e-03 12 132017535 132017721 187 + 1.935 1.847 -0.298
ENSG00000183495 E034 59.1815553 0.0004468988 1.289777e-02 3.567511e-02 12 132018210 132018376 167 + 1.796 1.750 -0.156
ENSG00000183495 E035 49.7572469 0.0085962935 1.907259e-01 3.146643e-01 12 132020049 132020218 170 + 1.702 1.689 -0.045
ENSG00000183495 E036 39.9705696 0.0072781338 9.970595e-02 1.900263e-01 12 132021079 132021321 243 + 1.620 1.580 -0.135
ENSG00000183495 E037 43.5630957 0.0005404560 1.021407e-03 4.032981e-03 12 132023777 132023941 165 + 1.696 1.589 -0.364
ENSG00000183495 E038 60.7961831 0.0013970344 9.668370e-03 2.794611e-02 12 132025646 132025804 159 + 1.808 1.753 -0.185
ENSG00000183495 E039 51.5022650 0.0236293557 1.853981e-01 3.079976e-01 12 132027437 132027531 95 + 1.731 1.694 -0.126
ENSG00000183495 E040 112.9158347 0.0094784380 2.075525e-01 3.355482e-01 12 132028017 132028288 272 + 2.041 2.050 0.032
ENSG00000183495 E041 0.0000000       12 132028946 132029700 755 +      
ENSG00000183495 E042 86.4260782 0.0003148240 5.691590e-02 1.213144e-01 12 132029701 132029903 203 + 1.932 1.927 -0.015
ENSG00000183495 E043 93.5531770 0.0022001659 7.107666e-04 2.937319e-03 12 132029989 132030158 170 + 2.003 1.931 -0.241
ENSG00000183495 E044 136.6084735 0.0047948904 3.182894e-03 1.080569e-02 12 132031953 132032149 197 + 2.159 2.105 -0.181
ENSG00000183495 E045 104.3095096 0.0063616608 1.388779e-02 3.797194e-02 12 132037682 132037793 112 + 2.039 1.991 -0.161
ENSG00000183495 E046 104.9499397 0.0034267343 7.560566e-02 1.524774e-01 12 132037953 132038096 144 + 2.015 2.012 -0.011
ENSG00000183495 E047 102.3682245 0.0006820253 1.131971e-01 2.101881e-01 12 132043304 132043462 159 + 1.999 2.010 0.038
ENSG00000183495 E048 82.6829783 0.0003732368 3.806004e-01 5.248670e-01 12 132043645 132043728 84 + 1.893 1.927 0.115
ENSG00000183495 E049 97.9516414 0.0002706553 6.082982e-02 1.280362e-01 12 132044177 132044311 135 + 1.983 1.984 0.004
ENSG00000183495 E050 65.5405925 0.0004096995 1.867393e-01 3.096391e-01 12 132044671 132044715 45 + 1.803 1.813 0.034
ENSG00000183495 E051 109.2543437 0.0004460483 3.984572e-02 9.074426e-02 12 132044800 132044953 154 + 2.029 2.027 -0.009
ENSG00000183495 E052 128.3188211 0.0002356308 2.934937e-01 4.345632e-01 12 132045319 132045560 242 + 2.077 2.113 0.119
ENSG00000183495 E053 127.6050259 0.0021345014 3.112808e-01 4.537280e-01 12 132045727 132045900 174 + 2.076 2.109 0.111
ENSG00000183495 E054 110.5483529 0.0015333782 6.658375e-01 7.734352e-01 12 132050323 132050459 137 + 1.980 2.068 0.294
ENSG00000183495 E055 59.7119071 0.0014008306 3.686850e-01 5.130851e-01 12 132050599 132050655 57 + 1.696 1.811 0.388
ENSG00000183495 E056 0.4847352 0.2274978495 4.713915e-01 6.105067e-01 12 132050656 132051016 361 + 0.230 0.116 -1.190
ENSG00000183495 E057 44.2388216 0.0005038883 5.188584e-01 6.529918e-01 12 132053146 132053224 79 + 1.578 1.681 0.351
ENSG00000183495 E058 70.1180636 0.0003510000 6.191822e-01 7.366563e-01 12 132053343 132053597 255 + 1.784 1.874 0.304
ENSG00000183495 E059 52.3750747 0.0004167802 9.127152e-01 9.486852e-01 12 132054974 132055019 46 + 1.677 1.740 0.213
ENSG00000183495 E060 84.5295352 0.0003426557 2.605576e-01 3.981020e-01 12 132055099 132055208 110 + 1.848 1.962 0.383
ENSG00000183495 E061 120.5189270 0.0002751468 1.120708e-01 2.085826e-01 12 132062110 132062323 214 + 1.996 2.118 0.411
ENSG00000183495 E062 75.9182690 0.0008786042 6.963389e-01 7.967201e-01 12 132062466 132062594 129 + 1.824 1.910 0.289
ENSG00000183495 E063 70.5165488 0.0009406640 3.553125e-02 8.267365e-02 12 132062595 132062701 107 + 1.739 1.904 0.554
ENSG00000183495 E064 115.3377292 0.0008439649 4.639160e-03 1.492933e-02 12 132064668 132064886 219 + 1.947 2.120 0.578
ENSG00000183495 E065 9.4161718 0.0017621656 8.052753e-08 8.329620e-07 12 132064908 132066773 1866 + 1.239 0.721 -1.937
ENSG00000183495 E066 46.4680974 0.0005039369 1.876756e-02 4.882530e-02 12 132066774 132066794 21 + 1.540 1.735 0.663
ENSG00000183495 E067 123.5699181 0.0005677501 4.227625e-03 1.377935e-02 12 132066795 132066969 175 + 1.980 2.148 0.561
ENSG00000183495 E068 1.5813667 0.0656301480 9.308633e-01 9.605027e-01 12 132066970 132067361 392 + 0.378 0.405 0.148
ENSG00000183495 E069 105.0753356 0.0008614004 4.938155e-04 2.136424e-03 12 132067362 132067486 125 + 1.887 2.089 0.679
ENSG00000183495 E070 7.4982772 0.0024270176 3.335794e-01 4.773183e-01 12 132068099 132069494 1396 + 0.954 0.904 -0.190
ENSG00000183495 E071 111.0054260 0.0007508341 3.438922e-04 1.555657e-03 12 132069495 132069641 147 + 1.906 2.109 0.680
ENSG00000183495 E072 7.4804211 0.0024331960 2.073169e-01 3.352890e-01 12 132075701 132076515 815 + 0.970 0.887 -0.315
ENSG00000183495 E073 85.0606265 0.0039990798 1.090602e-03 4.272004e-03 12 132076516 132076593 78 + 1.769 2.006 0.799
ENSG00000183495 E074 1512.4684749 0.0117588865 6.091075e-13 1.548076e-11 12 132077401 132080460 3060 + 2.913 3.297 1.276