ENSG00000182621

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000338037 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.10736888 0.0000000 0.2558237 0.000000000 0.25582369 4.732398 0.04698750 0.0000000 0.06823333 0.06823333 1.000000e+00 4.001022e-11 FALSE TRUE
ENST00000378641 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.09970460 0.0000000 0.4224085 0.000000000 0.24778589 5.434323 0.02452917 0.0000000 0.09840000 0.09840000 4.090839e-01 4.001022e-11 FALSE TRUE
ENST00000437439 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.11685230 0.2397173 0.0000000 0.030730993 0.00000000 -4.642224 0.04672500 0.1932667 0.00000000 -0.19326667 4.001022e-11 4.001022e-11   FALSE
ENST00000625874 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.14081092 0.0000000 0.2697373 0.000000000 0.26973732 4.806001 0.03286667 0.0000000 0.05470000 0.05470000 1.000000e+00 4.001022e-11 FALSE TRUE
ENST00000626966 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.22990387 0.0000000 0.2872855 0.000000000 0.14777567 4.893777 0.07745417 0.0000000 0.07343333 0.07343333 4.409265e-01 4.001022e-11 FALSE TRUE
ENST00000628900 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding processed_transcript 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.17506046 0.1454245 0.3420758 0.079526725 0.34207584 1.179672 0.07295417 0.1422000 0.06936667 -0.07283333 5.621276e-01 4.001022e-11 FALSE TRUE
ENST00000629992 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.27162134 0.1092930 0.5978994 0.004023944 0.01734198 2.349324 0.10655833 0.0916000 0.14326667 0.05166667 4.661543e-01 4.001022e-11 TRUE TRUE
ENST00000637422 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.40747899 0.0000000 0.0000000 0.000000000 0.00000000 0.000000 0.09834583 0.0000000 0.00000000 0.00000000   4.001022e-11   FALSE
ENST00000637935 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding protein_coding 2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.09687818 0.2108372 0.0000000 0.119845444 0.00000000 -4.464911 0.05417083 0.1461667 0.00000000 -0.14616667 3.554269e-02 4.001022e-11   FALSE
MSTRG.20338.3 ENSG00000182621 HEK293_OSMI2_2hA HEK293_TMG_2hB PLCB1 protein_coding   2.715791 1.252008 4.241621 0.1977252 0.3555829 1.752292 0.60363519 0.1913044 1.6037774 0.098086253 0.24074029 3.002991 0.19253750 0.1844000 0.37423333 0.18983333 4.516825e-01 4.001022e-11 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000182621 E001 0.0000000       20 8077251 8077304 54 +      
ENSG00000182621 E002 0.0000000       20 8114453 8114458 6 +      
ENSG00000182621 E003 0.4482035 0.0273521469 1.000000e+00 1.000000e+00 20 8114459 8114506 48 + 0.146 0.000 -10.972
ENSG00000182621 E004 2.1487343 0.0564026666 4.965650e-01 6.331924e-01 20 8114507 8114573 67 + 0.392 0.529 0.700
ENSG00000182621 E005 0.2987644 0.0270405538 1.000000e+00   20 8132138 8132265 128 + 0.103 0.000 -13.127
ENSG00000182621 E006 0.2987644 0.0270405538 1.000000e+00   20 8132266 8132269 4 + 0.103 0.000 -13.127
ENSG00000182621 E007 1.7651394 0.0089406725 1.087434e-01 2.036830e-01 20 8132270 8132314 45 + 0.415 0.000 -15.172
ENSG00000182621 E008 3.0979950 0.0048800590 1.570561e-01 2.711837e-01 20 8132315 8132515 201 + 0.564 0.254 -1.744
ENSG00000182621 E009 1.3328556 0.0098928816 7.855663e-01 8.626031e-01 20 8132516 8132525 10 + 0.315 0.254 -0.423
ENSG00000182621 E010 3.8803488 0.0041419328 6.791887e-01 7.834751e-01 20 8132526 8132648 123 + 0.609 0.530 -0.361
ENSG00000182621 E011 6.0882900 0.0028219624 5.770869e-01 7.023951e-01 20 8132649 8132750 102 + 0.732 0.817 0.341
ENSG00000182621 E012 0.1451727 0.0434185207 1.000000e+00   20 8141871 8141948 78 + 0.054 0.000 -12.171
ENSG00000182621 E013 6.6388023 0.0024918017 2.422438e-01 3.768371e-01 20 8150294 8150299 6 + 0.743 0.912 0.661
ENSG00000182621 E014 7.7385699 0.0021916268 1.457396e-01 2.558537e-01 20 8150300 8150324 25 + 0.792 0.989 0.752
ENSG00000182621 E015 10.6696329 0.0016577558 1.774021e-01 2.978719e-01 20 8150325 8150371 47 + 0.920 1.084 0.604
ENSG00000182621 E016 0.0000000       20 8150372 8150383 12 +      
ENSG00000182621 E017 0.0000000       20 8305674 8305685 12 +      
ENSG00000182621 E018 0.0000000       20 8305686 8305714 29 +      
ENSG00000182621 E019 0.0000000       20 8305715 8305933 219 +      
ENSG00000182621 E020 0.0000000       20 8306366 8306377 12 +      
ENSG00000182621 E021 0.2966881 0.0272388790 1.000000e+00   20 8371080 8371381 302 + 0.103 0.000 -13.126
ENSG00000182621 E022 11.4928879 0.0015658765 2.994803e-01 4.409906e-01 20 8371382 8371450 69 + 0.960 1.084 0.454
ENSG00000182621 E023 0.4762024 0.2067454451 3.927954e-01 5.367032e-01 20 8371451 8372166 716 + 0.103 0.255 1.583
ENSG00000182621 E024 0.6362506 0.4459099894 5.273609e-01 6.604456e-01 20 8600715 8600725 11 + 0.147 0.255 0.990
ENSG00000182621 E025 1.9012502 0.1015868308 1.267626e-01 2.296461e-01 20 8600726 8600781 56 + 0.316 0.620 1.569
ENSG00000182621 E026 0.0000000       20 8623876 8623921 46 +      
ENSG00000182621 E027 0.0000000       20 8625263 8625312 50 +      
ENSG00000182621 E028 0.0000000       20 8628288 8628293 6 +      
ENSG00000182621 E029 16.9358391 0.0011499948 3.353458e-02 7.884514e-02 20 8628294 8628431 138 + 1.095 1.303 0.736
ENSG00000182621 E030 0.2214452 0.0379758324 6.095470e-02   20 8628432 8628617 186 + 0.000 0.255 14.512
ENSG00000182621 E031 11.1415558 0.0016047241 1.341763e-01 2.399541e-01 20 8646102 8646181 80 + 0.934 1.112 0.652
ENSG00000182621 E032 10.9398173 0.0038762055 1.267346e-01 2.296086e-01 20 8647900 8647953 54 + 0.927 1.112 0.678
ENSG00000182621 E033 6.4267066 0.0049866159 2.199079e-01 3.503035e-01 20 8649374 8649390 17 + 0.732 0.911 0.703
ENSG00000182621 E034 6.5718793 0.0031894700 2.435837e-01 3.783872e-01 20 8649391 8649393 3 + 0.743 0.911 0.660
ENSG00000182621 E035 9.8860340 0.0019751012 3.579269e-01 5.023424e-01 20 8649394 8649449 56 + 0.906 1.023 0.435
ENSG00000182621 E036 0.2214452 0.0379758324 6.095470e-02   20 8649450 8649989 540 + 0.000 0.255 14.512
ENSG00000182621 E037 4.6554268 0.0033923852 1.910061e-01 3.150103e-01 20 8651413 8651627 215 + 0.609 0.817 0.862
ENSG00000182621 E038 15.5991111 0.0011462301 8.755309e-01 9.240485e-01 20 8651628 8653531 1904 + 1.095 1.112 0.059
ENSG00000182621 E039 8.5960172 0.0215539096 6.918155e-01 7.932025e-01 20 8657184 8657284 101 + 0.884 0.817 -0.260
ENSG00000182621 E040 10.9297537 0.0016153001 4.230258e-01 5.661512e-01 20 8658538 8658620 83 + 0.979 0.867 -0.422
ENSG00000182621 E041 11.7615310 0.0014894274 2.494429e-02 6.175669e-02 20 8658621 8658704 84 + 1.036 0.697 -1.310
ENSG00000182621 E042 12.3633357 0.0024767663 5.780083e-01 7.031615e-01 20 8684932 8685078 147 + 1.025 0.952 -0.271
ENSG00000182621 E043 11.2800406 0.0015147409 3.484637e-01 4.927001e-01 20 8697626 8697783 158 + 0.997 0.867 -0.488
ENSG00000182621 E044 8.3960944 0.0019463060 7.374098e-03 2.219011e-02 20 8708670 8708752 83 + 0.913 0.413 -2.177
ENSG00000182621 E045 0.2214452 0.0379758324 6.095470e-02   20 8715862 8716263 402 + 0.000 0.255 14.512
ENSG00000182621 E046 8.2487437 0.0019718671 1.050303e-01 1.981307e-01 20 8716264 8716348 85 + 0.892 0.621 -1.094
ENSG00000182621 E047 13.3393630 0.0090758860 6.737963e-01 7.793864e-01 20 8717671 8717848 178 + 1.046 0.989 -0.209
ENSG00000182621 E048 11.2945890 0.0636838199 7.780751e-01 8.572262e-01 20 8722354 8722421 68 + 0.980 0.917 -0.236
ENSG00000182621 E049 10.4357327 0.0441781922 9.084205e-01 9.458535e-01 20 8724656 8724752 97 + 0.942 0.917 -0.095
ENSG00000182621 E050 7.5242510 0.0159728287 6.968894e-01 7.971477e-01 20 8727309 8727393 85 + 0.828 0.762 -0.262
ENSG00000182621 E051 11.9062749 0.0082921292 3.065624e-01 4.487547e-01 20 8729050 8729174 125 + 1.014 0.867 -0.551
ENSG00000182621 E052 0.0000000       20 8729175 8729899 725 +      
ENSG00000182621 E053 0.1515154 0.0427001624 1.000000e+00   20 8732107 8732170 64 + 0.054 0.000 -12.174
ENSG00000182621 E054 17.3727399 0.0188896257 1.972944e-01 3.228542e-01 20 8733238 8733392 155 + 1.169 0.990 -0.648
ENSG00000182621 E055 18.0318852 0.0091453209 1.764429e-03 6.486317e-03 20 8737028 8737192 165 + 1.209 0.761 -1.671
ENSG00000182621 E056 13.1235299 0.0013127466 7.199483e-02 1.466550e-01 20 8739261 8739360 100 + 1.066 0.817 -0.936
ENSG00000182621 E057 11.7352282 0.0015558077 2.772470e-02 6.747204e-02 20 8740344 8740448 105 + 1.030 0.697 -1.290
ENSG00000182621 E058 12.1226831 0.0272813055 5.210123e-01 6.549064e-01 20 8741464 8741573 110 + 1.013 0.915 -0.367
ENSG00000182621 E059 0.0000000       20 8750804 8750915 112 +      
ENSG00000182621 E060 0.0000000       20 8751122 8752348 1227 +      
ENSG00000182621 E061 14.5713000 0.0614774218 7.438565e-01 8.323735e-01 20 8757046 8757178 133 + 1.076 1.034 -0.152
ENSG00000182621 E062 9.8216939 0.0017629603 2.159928e-01 3.455808e-01 20 8760407 8760460 54 + 0.947 0.761 -0.719
ENSG00000182621 E063 7.7607742 0.0025749375 1.260093e-02 3.497127e-02 20 8765139 8765168 30 + 0.884 0.413 -2.066
ENSG00000182621 E064 9.8675525 0.0037965746 1.024097e-02 2.935840e-02 20 8765169 8765259 91 + 0.973 0.530 -1.814
ENSG00000182621 E065 9.7149017 0.0106618394 4.481967e-01 5.895144e-01 20 8765260 8765358 99 + 0.934 0.818 -0.446
ENSG00000182621 E066 13.3019990 0.0013400847 2.521578e-01 3.884826e-01 20 8774539 8774719 181 + 1.061 0.912 -0.556
ENSG00000182621 E067 10.0102215 0.0020658738 9.117615e-02 1.769743e-01 20 8788449 8788525 77 + 0.960 0.697 -1.031
ENSG00000182621 E068 11.9193877 0.0014688677 6.458151e-02 1.343462e-01 20 8788633 8788722 90 + 1.030 0.761 -1.027
ENSG00000182621 E069 8.2810090 0.0020367528 2.418214e-01 3.763407e-01 20 8789518 8789545 28 + 0.884 0.697 -0.744
ENSG00000182621 E070 8.7589209 0.0129664402 9.159149e-01 9.508320e-01 20 8789546 8789575 30 + 0.884 0.867 -0.066
ENSG00000182621 E071 7.8668940 0.0318509034 8.321081e-01 8.947638e-01 20 8790175 8790195 21 + 0.836 0.866 0.119
ENSG00000182621 E072 8.8740289 0.0136241697 5.545715e-01 6.835340e-01 20 8790196 8790221 26 + 0.869 0.952 0.316
ENSG00000182621 E073 10.2894747 0.0018543263 8.858860e-01 9.310355e-01 20 8790222 8790261 40 + 0.934 0.952 0.068
ENSG00000182621 E074 0.2934659 0.0297062364 1.957472e-01   20 8792085 8792140 56 + 0.054 0.254 2.576
ENSG00000182621 E075 0.5169874 0.0204672286 3.798013e-02 8.731323e-02 20 8792587 8792624 38 + 0.054 0.413 3.578
ENSG00000182621 E076 1.1383625 0.0129393576 6.992711e-02 1.432501e-01 20 8792625 8792790 166 + 0.185 0.530 2.164
ENSG00000182621 E077 3.5847920 0.0048969166 8.624782e-01 9.153207e-01 20 8802056 8802173 118 + 0.564 0.530 -0.158
ENSG00000182621 E078 0.4031496 0.0243558132 8.819172e-03 2.583086e-02 20 8802174 8802493 320 + 0.000 0.414 15.501
ENSG00000182621 E079 0.0000000       20 8880900 8880993 94 +      
ENSG00000182621 E080 4.6889292 0.0034602240 1.695636e-01 2.876319e-01 20 8881622 8881627 6 + 0.687 0.413 -1.279
ENSG00000182621 E081 113.5612165 0.0003165557 2.680093e-06 2.028346e-05 20 8881628 8884903 3276 + 1.897 2.072 0.586
ENSG00000182621 E082 0.0000000       20 8962196 8962307 112 +      
ENSG00000182621 E083 0.0000000       20 8962308 8962336 29 +      
ENSG00000182621 E084 0.0000000       20 8962337 8962485 149 +      
ENSG00000182621 E085 0.1817044 0.0395122749 6.119574e-02   20 8962486 8962892 407 + 0.000 0.254 14.503
ENSG00000182621 E086 0.0000000       20 8962893 8963010 118 +      
ENSG00000182621 E087 0.0000000       20 8965090 8965095 6 +      
ENSG00000182621 E088 0.0000000       20 8965096 8965151 56 +      
ENSG00000182621 E089 0.4449813 0.0216669452 3.764854e-01 5.208079e-01 20 8965152 8965435 284 + 0.103 0.254 1.576
ENSG00000182621 E090 1.7840779 0.1793634974 2.310999e-01 3.637852e-01 20 8967220 8968360 1141 + 0.315 0.610 1.526