ENSG00000169045

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000329433 ENSG00000169045 HEK293_OSMI2_2hA HEK293_TMG_2hB HNRNPH1 protein_coding protein_coding 522.8491 269.0993 765.0021 21.96022 22.19458 1.50729 18.65467 30.389761 17.686342 4.078398 3.804072 -0.7806088 0.05034167 0.1119000 0.02323333 -0.08866667 1.168168e-08 1.501554e-58 FALSE TRUE
ENST00000393432 ENSG00000169045 HEK293_OSMI2_2hA HEK293_TMG_2hB HNRNPH1 protein_coding protein_coding 522.8491 269.0993 765.0021 21.96022 22.19458 1.50729 41.49677 23.802939 55.309055 1.445011 3.990707 1.2160308 0.08335000 0.0905000 0.07220000 -0.01830000 5.788296e-01 1.501554e-58 FALSE TRUE
ENST00000442819 ENSG00000169045 HEK293_OSMI2_2hA HEK293_TMG_2hB HNRNPH1 protein_coding protein_coding 522.8491 269.0993 765.0021 21.96022 22.19458 1.50729 105.50954 64.714131 168.425001 4.775437 4.077509 1.3798164 0.20749583 0.2416333 0.22053333 -0.02110000 6.608878e-01 1.501554e-58 FALSE TRUE
ENST00000510411 ENSG00000169045 HEK293_OSMI2_2hA HEK293_TMG_2hB HNRNPH1 protein_coding protein_coding 522.8491 269.0993 765.0021 21.96022 22.19458 1.50729 53.52131 56.665631 51.589924 7.941378 2.665636 -0.1353596 0.12742083 0.2097667 0.06760000 -0.14216667 3.982904e-12 1.501554e-58 FALSE TRUE
ENST00000523449 ENSG00000169045 HEK293_OSMI2_2hA HEK293_TMG_2hB HNRNPH1 protein_coding protein_coding 522.8491 269.0993 765.0021 21.96022 22.19458 1.50729 15.44159 37.439134 4.431794 9.614440 1.312404 -3.0757178 0.04989583 0.1348667 0.00570000 -0.12916667 4.284341e-14 1.501554e-58 FALSE TRUE
ENST00000523921 ENSG00000169045 HEK293_OSMI2_2hA HEK293_TMG_2hB HNRNPH1 protein_coding protein_coding 522.8491 269.0993 765.0021 21.96022 22.19458 1.50729 38.76121 4.848826 69.132195 2.510205 7.975118 3.8308868 0.05933333 0.0197000 0.08993333 0.07023333 4.433561e-01 1.501554e-58 FALSE FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000169045 E001 9.3258949 1.844010e-03 3.333913e-03 1.124565e-02 5 179614178 179614178 1 - 0.849 1.195 1.275
ENSG00000169045 E002 38.9787917 7.529769e-03 1.191431e-05 7.779181e-05 5 179614179 179614179 1 - 1.437 1.783 1.179
ENSG00000169045 E003 58.9440156 8.559421e-03 7.651943e-08 7.948010e-07 5 179614180 179614180 1 - 1.589 1.974 1.298
ENSG00000169045 E004 107.6847752 8.764261e-03 3.009420e-08 3.386550e-07 5 179614181 179614194 14 - 1.859 2.220 1.211
ENSG00000169045 E005 2635.2053126 8.024021e-03 1.123933e-11 2.321476e-10 5 179614195 179614518 324 - 3.248 3.594 1.151
ENSG00000169045 E006 1592.2126901 7.112945e-03 3.236575e-07 2.974336e-06 5 179614519 179614523 5 - 3.071 3.333 0.870
ENSG00000169045 E007 3409.8896405 3.668718e-03 8.748220e-18 4.336274e-16 5 179614524 179614685 162 - 3.385 3.682 0.986
ENSG00000169045 E008 2666.5967880 1.503877e-03 4.932130e-55 4.116199e-52 5 179614686 179614777 92 - 3.250 3.602 1.171
ENSG00000169045 E009 2301.4534981 1.788230e-03 1.100142e-56 9.831067e-54 5 179614778 179614876 99 - 3.166 3.555 1.293
ENSG00000169045 E010 1520.0705795 3.165636e-03 7.012266e-06 4.829508e-05 5 179614877 179614889 13 - 3.090 3.265 0.582
ENSG00000169045 E011 2050.4692338 2.193708e-03 1.811477e-05 1.135001e-04 5 179614890 179614959 70 - 3.232 3.379 0.487
ENSG00000169045 E012 97.3830761 3.559730e-03 2.540197e-05 1.537779e-04 5 179614960 179615545 586 - 2.017 1.847 -0.569
ENSG00000169045 E013 1327.6544725 2.243307e-03 7.709244e-03 2.304889e-02 5 179615546 179615559 14 - 3.059 3.167 0.358
ENSG00000169045 E014 1536.9430333 6.982304e-04 2.890080e-04 1.335136e-03 5 179615560 179615595 36 - 3.127 3.225 0.325
ENSG00000169045 E015 102.2362952 5.853231e-03 4.582668e-06 3.290777e-05 5 179615596 179616125 530 - 2.050 1.836 -0.719
ENSG00000169045 E016 1485.7288996 5.298556e-04 4.348313e-06 3.137234e-05 5 179616126 179616140 15 - 3.108 3.216 0.357
ENSG00000169045 E017 1434.1192799 5.903186e-04 1.316849e-08 1.587585e-07 5 179616141 179616157 17 - 3.085 3.212 0.421
ENSG00000169045 E018 1885.3422318 8.627508e-04 2.521477e-04 1.184238e-03 5 179616158 179616218 61 - 3.214 3.315 0.337
ENSG00000169045 E019 321.6814034 5.421492e-04 1.975281e-36 5.323059e-34 5 179616219 179616763 545 - 2.559 2.268 -0.970
ENSG00000169045 E020 60.4123606 1.250735e-02 8.690987e-04 3.505987e-03 5 179616764 179616859 96 - 1.821 1.602 -0.743
ENSG00000169045 E021 29.1176673 6.818605e-04 3.817811e-01 5.260625e-01 5 179616860 179616868 9 - 1.460 1.437 -0.078
ENSG00000169045 E022 937.8791978 1.381935e-04 3.580596e-03 1.195596e-02 5 179616869 179616873 5 - 2.920 2.998 0.260
ENSG00000169045 E023 1276.0090158 7.348983e-05 3.156296e-03 1.072596e-02 5 179616874 179616898 25 - 3.056 3.128 0.239
ENSG00000169045 E024 1765.4416879 8.294999e-05 6.736411e-02 1.389749e-01 5 179616899 179616958 60 - 3.202 3.259 0.190
ENSG00000169045 E025 197.9401903 4.637549e-03 6.873678e-14 1.998769e-12 5 179616959 179617020 62 - 2.353 2.042 -1.039
ENSG00000169045 E026 351.0715232 8.247510e-04 7.812195e-06 5.319329e-05 5 179617021 179617050 30 - 2.545 2.473 -0.242
ENSG00000169045 E027 1283.6498836 1.530672e-04 3.457873e-02 8.085856e-02 5 179617051 179617059 9 - 3.062 3.126 0.214
ENSG00000169045 E028 1164.4246123 3.704826e-04 2.737521e-01 4.128411e-01 5 179617060 179617110 51 - 3.023 3.078 0.183
ENSG00000169045 E029 72.2647967 8.664193e-03 5.482410e-05 3.058291e-04 5 179617111 179617513 403 - 1.902 1.666 -0.797
ENSG00000169045 E030 1814.0492134 4.735032e-04 4.747607e-05 2.689733e-04 5 179617514 179617649 136 - 3.200 3.292 0.307
ENSG00000169045 E031 1087.2877496 1.852789e-03 5.895922e-02 1.248529e-01 5 179617799 179617816 18 - 2.983 3.062 0.265
ENSG00000169045 E032 2373.8953913 5.882071e-04 3.027616e-01 4.446784e-01 5 179617817 179617911 95 - 3.343 3.364 0.071
ENSG00000169045 E033 1481.0840567 2.649079e-04 2.429572e-03 8.550689e-03 5 179617912 179617932 21 - 3.146 3.145 -0.001
ENSG00000169045 E034 113.2257925 3.627090e-03 2.117446e-09 2.951974e-08 5 179617933 179617988 56 - 2.102 1.847 -0.856
ENSG00000169045 E035 1981.6165119 7.519811e-05 1.154310e-04 5.929034e-04 5 179617989 179618044 56 - 3.271 3.273 0.008
ENSG00000169045 E036 1651.4100411 2.069996e-04 4.649464e-08 5.047719e-07 5 179618045 179618060 16 - 3.201 3.176 -0.084
ENSG00000169045 E037 16.9871874 1.073218e-03 3.958722e-04 1.758631e-03 5 179618144 179618144 1 - 1.311 1.005 -1.093
ENSG00000169045 E038 1834.1969144 1.137851e-04 4.055841e-08 4.454818e-07 5 179618145 179618160 16 - 3.244 3.227 -0.057
ENSG00000169045 E039 2222.2941678 9.402940e-05 3.845781e-10 6.152438e-09 5 179618161 179618204 44 - 3.328 3.309 -0.065
ENSG00000169045 E040 1675.0785841 6.773213e-04 1.921396e-06 1.500053e-05 5 179618205 179618207 3 - 3.211 3.173 -0.127
ENSG00000169045 E041 1775.7626125 6.218609e-04 5.297869e-04 2.270839e-03 5 179618208 179618217 10 - 3.229 3.214 -0.051
ENSG00000169045 E042 1609.1320160 7.956853e-04 7.692032e-04 3.147234e-03 5 179618218 179618223 6 - 3.188 3.168 -0.066
ENSG00000169045 E043 1519.4683138 6.599048e-04 2.878584e-04 1.330582e-03 5 179618224 179618235 12 - 3.163 3.142 -0.069
ENSG00000169045 E044 1364.8581161 3.548356e-04 6.567045e-06 4.550834e-05 5 179618236 179618238 3 - 3.118 3.093 -0.082
ENSG00000169045 E045 2426.6783863 8.136156e-04 1.158176e-01 2.139759e-01 5 179618239 179618323 85 - 3.356 3.367 0.036
ENSG00000169045 E046 985.7372931 5.883841e-03 3.286360e-14 1.001917e-12 5 179618324 179619100 777 - 3.042 2.767 -0.912
ENSG00000169045 E047 412.8769761 7.247644e-03 2.787987e-15 9.961820e-14 5 179619101 179619268 168 - 2.678 2.331 -1.158
ENSG00000169045 E048 1206.7856222 1.846957e-03 8.145888e-01 8.825468e-01 5 179619269 179619272 4 - 3.043 3.083 0.133
ENSG00000169045 E049 1773.8701335 1.084815e-03 9.258165e-01 9.572870e-01 5 179619273 179619300 28 - 3.212 3.246 0.112
ENSG00000169045 E050 1462.4425785 1.128565e-03 3.523728e-01 4.966445e-01 5 179619301 179619314 14 - 3.134 3.151 0.058
ENSG00000169045 E051 1905.7513666 2.034416e-03 2.564448e-02 6.321015e-02 5 179619315 179619360 46 - 3.261 3.242 -0.062
ENSG00000169045 E052 1790.8881928 1.320256e-03 4.238055e-06 3.064103e-05 5 179619361 179619407 47 - 3.246 3.188 -0.190
ENSG00000169045 E053 199.6315619 3.406256e-03 1.653469e-36 4.500642e-34 5 179619408 179619468 61 - 2.393 1.855 -1.801
ENSG00000169045 E054 381.1255848 3.657959e-03 1.627376e-42 6.545679e-40 5 179619469 179620037 569 - 2.669 2.163 -1.687
ENSG00000169045 E055 179.7001315 3.437257e-03 4.081829e-53 2.951489e-50 5 179620675 179620732 58 - 2.369 1.624 -2.502
ENSG00000169045 E056 179.8784308 2.332067e-04 2.101343e-95 5.687045e-92 5 179620733 179620772 40 - 2.373 1.585 -2.649
ENSG00000169045 E057 205.9116197 2.003651e-04 1.597330e-106 5.501987e-103 5 179620773 179620813 41 - 2.431 1.659 -2.591
ENSG00000169045 E058 251.7676449 2.303104e-04 5.865938e-122 3.268483e-118 5 179620814 179620891 78 - 2.515 1.769 -2.500
ENSG00000169045 E059 1441.9372146 9.059583e-04 6.102083e-10 9.421526e-09 5 179620892 179620896 5 - 3.157 3.081 -0.254
ENSG00000169045 E060 1944.5505082 1.250143e-03 1.740445e-06 1.371899e-05 5 179620897 179620942 46 - 3.282 3.223 -0.194
ENSG00000169045 E061 2043.0289205 1.118738e-03 1.075286e-07 1.085989e-06 5 179620943 179621010 68 - 3.305 3.242 -0.210
ENSG00000169045 E062 1354.1294251 8.660750e-04 7.744114e-10 1.172741e-08 5 179621011 179621035 25 - 3.130 3.055 -0.249
ENSG00000169045 E063 138.0808225 1.077890e-02 1.784325e-25 2.047457e-23 5 179621036 179621241 206 - 2.253 1.544 -2.387
ENSG00000169045 E064 1046.8867068 1.504912e-03 1.126943e-04 5.802711e-04 5 179621242 179621253 12 - 3.012 2.959 -0.176
ENSG00000169045 E065 2453.1044621 1.497433e-03 2.323547e-06 1.782214e-05 5 179621254 179621346 93 - 3.384 3.322 -0.207
ENSG00000169045 E066 1546.5234287 1.359026e-03 1.073798e-05 7.085361e-05 5 179621347 179621370 24 - 3.181 3.126 -0.186
ENSG00000169045 E067 1723.3937961 3.311889e-03 2.501886e-05 1.516865e-04 5 179621371 179621397 27 - 3.239 3.148 -0.303
ENSG00000169045 E068 248.4242128 9.050614e-04 2.073807e-96 5.777595e-93 5 179621398 179621686 289 - 2.507 1.780 -2.435
ENSG00000169045 E069 134.1298984 2.449862e-04 2.884466e-65 3.525506e-62 5 179621843 179621950 108 - 2.240 1.524 -2.414
ENSG00000169045 E070 79.5829822 3.813963e-04 4.655940e-38 1.420377e-35 5 179621951 179621976 26 - 2.013 1.328 -2.332
ENSG00000169045 E071 22.0303446 1.247547e-03 2.676586e-13 7.163034e-12 5 179622849 179622951 103 - 1.472 0.745 -2.652
ENSG00000169045 E072 68.1846987 3.752993e-04 9.230614e-40 3.128287e-37 5 179622952 179623036 85 - 1.957 1.151 -2.765
ENSG00000169045 E073 1512.4132491 3.438062e-03 6.769771e-06 4.678826e-05 5 179623037 179623048 12 - 3.186 3.082 -0.344
ENSG00000169045 E074 2429.6233808 2.893433e-03 6.525480e-09 8.330589e-08 5 179623049 179623164 116 - 3.398 3.272 -0.418
ENSG00000169045 E075 30.2224029 3.755832e-03 9.369888e-02 1.808998e-01 5 179623165 179623187 23 - 1.499 1.411 -0.301
ENSG00000169045 E076 5.8347950 2.817190e-03 4.358132e-04 1.912166e-03 5 179623188 179623280 93 - 0.931 0.401 -2.309
ENSG00000169045 E077 15.3703081 1.109967e-03 1.506291e-06 1.204060e-05 5 179623281 179623594 314 - 1.302 0.818 -1.772
ENSG00000169045 E078 732.2203038 2.077551e-03 4.824264e-15 1.663225e-13 5 179623595 179623635 41 - 2.891 2.712 -0.597
ENSG00000169045 E079 1248.1563888 3.357293e-03 7.970400e-12 1.685233e-10 5 179623636 179623977 342 - 3.122 2.944 -0.591
ENSG00000169045 E080 0.1451727 4.354733e-02 1.000000e+00   5 179623978 179624096 119 - 0.082 0.000 -8.870
ENSG00000169045 E081 0.8877725 1.405423e-02 9.139940e-01 9.495247e-01 5 179624097 179624115 19 - 0.264 0.303 0.274
ENSG00000169045 E082 0.7405235 1.531011e-02 6.832553e-01 7.865097e-01 5 179624116 179624202 87 - 0.211 0.303 0.688
ENSG00000169045 E083 0.5901540 2.066171e-02 8.032168e-01 8.747337e-01 5 179624203 179624316 114 - 0.211 0.178 -0.311
ENSG00000169045 E084 10.5059194 1.759491e-03 8.902033e-01 9.338528e-01 5 179624317 179624669 353 - 1.026 1.047 0.075
ENSG00000169045 E085 0.1515154 4.339148e-02 1.000000e+00   5 179633892 179634064 173 - 0.082 0.000 -8.871
ENSG00000169045 E086 3.8321838 4.275445e-03 5.130274e-01 6.478743e-01 5 179634065 179634157 93 - 0.617 0.745 0.539
ENSG00000169045 E087 0.4427912 2.049143e-01 9.682857e-01 9.841983e-01 5 179634158 179634440 283 - 0.152 0.176 0.260
ENSG00000169045 E088 0.9599941 4.633761e-02 4.455211e-01 5.870548e-01 5 179634449 179634784 336 - 0.311 0.178 -1.041