ENSG00000168385

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000391971 ENSG00000168385 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPTIN2 protein_coding protein_coding 161.3018 73.65446 266.2816 9.91769 6.475964 1.853966 92.728595 36.743720 156.02430 2.3057223 4.576417 2.085901 0.54202917 0.50806667 0.58583333 0.077766667 2.714466e-01 1.383777e-43 FALSE TRUE
ENST00000391973 ENSG00000168385 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPTIN2 protein_coding protein_coding 161.3018 73.65446 266.2816 9.91769 6.475964 1.853966 12.252629 5.036088 16.19040 1.1932835 1.570083 1.682792 0.07540000 0.06793333 0.06076667 -0.007166667 8.989859e-01 1.383777e-43 FALSE TRUE
ENST00000441533 ENSG00000168385 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPTIN2 protein_coding protein_coding 161.3018 73.65446 266.2816 9.91769 6.475964 1.853966 9.075283 0.000000 19.07624 0.0000000 2.164048 10.898317 0.03483750 0.00000000 0.07140000 0.071400000 1.963272e-37 1.383777e-43   FALSE
ENST00000451310 ENSG00000168385 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPTIN2 protein_coding protein_coding 161.3018 73.65446 266.2816 9.91769 6.475964 1.853966 6.785691 20.646365 0.00000 5.9466791 0.000000 -11.012371 0.10126250 0.26916667 0.00000000 -0.269166667 1.383777e-43 1.383777e-43   FALSE
MSTRG.20184.20 ENSG00000168385 HEK293_OSMI2_2hA HEK293_TMG_2hB SEPTIN2 protein_coding   161.3018 73.65446 266.2816 9.91769 6.475964 1.853966 8.158194 4.886067 13.79402 0.8500965 1.628428 1.495393 0.05528333 0.06753333 0.05206667 -0.015466667 6.723269e-01 1.383777e-43 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000168385 E001 0.5879639 2.086823e-02 9.706864e-01 9.856895e-01 2 241315100 241315269 170 + 0.169 0.222 0.483
ENSG00000168385 E002 3.2190268 8.800095e-03 5.400331e-02 1.162706e-01 2 241315270 241315288 19 + 0.463 0.844 1.650
ENSG00000168385 E003 36.3224790 2.847241e-03 1.016407e-02 2.916885e-02 2 241315289 241315354 66 + 1.422 1.690 0.916
ENSG00000168385 E004 93.6519862 2.863196e-04 4.769446e-01 6.155483e-01 2 241315355 241315446 92 + 1.870 1.998 0.432
ENSG00000168385 E005 167.8503613 3.572629e-04 7.914906e-01 8.666210e-01 2 241315447 241315578 132 + 2.130 2.221 0.303
ENSG00000168385 E006 93.9962846 9.935644e-04 2.335928e-01 3.666644e-01 2 241315579 241315610 32 + 1.891 1.936 0.149
ENSG00000168385 E007 0.1482932 4.115975e-02 1.342328e-01   2 241315861 241315863 3 + 0.000 0.221 21.971
ENSG00000168385 E008 0.0000000       2 241315864 241315874 11 +      
ENSG00000168385 E009 0.1515154 4.287242e-02 1.000000e+00   2 241315875 241315881 7 + 0.064 0.000 -19.838
ENSG00000168385 E010 0.1515154 4.287242e-02 1.000000e+00   2 241315882 241315882 1 + 0.064 0.000 -19.838
ENSG00000168385 E011 0.3030308 3.700484e-01 1.000000e+00   2 241315883 241315893 11 + 0.120 0.000 -20.014
ENSG00000168385 E012 1.7164253 9.933086e-02 7.544605e-01 8.401077e-01 2 241315894 241315900 7 + 0.386 0.368 -0.103
ENSG00000168385 E013 2.4654697 1.143526e-01 4.002590e-01 5.439550e-01 2 241315901 241315903 3 + 0.510 0.368 -0.742
ENSG00000168385 E014 2.6869149 1.448861e-01 7.399287e-01 8.295015e-01 2 241315904 241315904 1 + 0.510 0.480 -0.144
ENSG00000168385 E015 3.2739484 7.061814e-02 4.104505e-01 5.540494e-01 2 241315905 241315905 1 + 0.587 0.479 -0.511
ENSG00000168385 E016 8.0369866 6.145162e-03 7.908596e-02 1.580493e-01 2 241315906 241315912 7 + 0.920 0.753 -0.648
ENSG00000168385 E017 21.9529858 8.127225e-04 1.255293e-03 4.827384e-03 2 241315913 241315920 8 + 1.326 1.114 -0.750
ENSG00000168385 E018 27.6703874 7.000562e-04 1.224229e-02 3.411538e-02 2 241315921 241315923 3 + 1.403 1.294 -0.381
ENSG00000168385 E019 28.1217115 6.869748e-04 1.530448e-02 4.117747e-02 2 241315924 241315924 1 + 1.409 1.308 -0.349
ENSG00000168385 E020 31.3743304 6.329642e-04 1.394294e-03 5.288289e-03 2 241315925 241315927 3 + 1.464 1.308 -0.540
ENSG00000168385 E021 51.5339961 3.563673e-03 1.159509e-04 5.953441e-04 2 241315928 241315934 7 + 1.676 1.501 -0.595
ENSG00000168385 E022 53.4633484 1.155936e-03 2.275594e-05 1.392187e-04 2 241315935 241315935 1 + 1.691 1.519 -0.589
ENSG00000168385 E023 118.2880887 1.257010e-02 1.140976e-02 3.213953e-02 2 241315936 241315943 8 + 2.017 1.928 -0.299
ENSG00000168385 E024 127.4167596 1.627538e-02 2.588900e-02 6.371505e-02 2 241315944 241315945 2 + 2.048 1.965 -0.279
ENSG00000168385 E025 139.1804591 1.694137e-02 3.113851e-02 7.417076e-02 2 241315946 241315950 5 + 2.085 2.006 -0.263
ENSG00000168385 E026 141.1951564 1.774212e-02 3.433624e-02 8.040665e-02 2 241315951 241315952 2 + 2.091 2.012 -0.264
ENSG00000168385 E027 204.1109433 1.355870e-02 1.174473e-03 4.554766e-03 2 241315953 241315958 6 + 2.260 2.130 -0.433
ENSG00000168385 E028 313.3595413 1.037433e-02 6.088764e-04 2.565495e-03 2 241315959 241315982 24 + 2.441 2.333 -0.363
ENSG00000168385 E029 2.5882782 5.635876e-03 5.857674e-01 7.093937e-01 2 241316003 241316169 167 + 0.508 0.477 -0.154
ENSG00000168385 E030 8.9692028 1.863080e-03 4.546498e-01 5.952538e-01 2 241316170 241316315 146 + 0.928 0.921 -0.026
ENSG00000168385 E031 8.0800714 9.544320e-03 3.045133e-01 4.465207e-01 2 241316316 241316421 106 + 0.902 0.845 -0.221
ENSG00000168385 E032 10.2538760 1.629634e-03 6.953340e-03 2.110263e-02 2 241316422 241316429 8 + 1.029 0.753 -1.054
ENSG00000168385 E033 15.2230445 1.128303e-03 5.268428e-03 1.666201e-02 2 241316430 241316482 53 + 1.175 0.954 -0.805
ENSG00000168385 E034 17.2255369 1.045880e-03 7.383139e-04 3.036852e-03 2 241316483 241316540 58 + 1.232 0.954 -1.004
ENSG00000168385 E035 4.8061030 3.737404e-03 1.512400e-03 5.676353e-03 2 241316541 241316550 10 + 0.773 0.222 -2.885
ENSG00000168385 E036 4.2127268 3.613249e-03 3.963725e-03 1.304217e-02 2 241316551 241316555 5 + 0.723 0.222 -2.685
ENSG00000168385 E037 1.1909051 1.091455e-02 8.388617e-02 1.656312e-01 2 241316556 241316575 20 + 0.356 0.000 -23.106
ENSG00000168385 E038 100.9201968 4.369555e-04 2.758478e-04 1.281412e-03 2 241317499 241317599 101 + 1.944 1.883 -0.206
ENSG00000168385 E039 1.3704194 1.792224e-02 3.699439e-01 5.143504e-01 2 241318237 241318344 108 + 0.356 0.222 -0.931
ENSG00000168385 E040 11.9321161 1.849076e-02 7.121402e-01 8.089819e-01 2 241320203 241320287 85 + 1.035 1.088 0.190
ENSG00000168385 E041 8.2841217 2.533515e-03 3.423186e-01 4.863139e-01 2 241324154 241324215 62 + 0.837 1.042 0.767
ENSG00000168385 E042 492.3100885 5.240233e-03 1.068374e-03 4.195518e-03 2 241324216 241324241 26 + 2.624 2.580 -0.146
ENSG00000168385 E043 12.8775077 4.666331e-02 3.986014e-01 5.423325e-01 2 241324409 241324662 254 + 1.016 1.226 0.754
ENSG00000168385 E044 6.6930498 2.389924e-02 9.125875e-03 2.659677e-02 2 241324663 241325244 582 + 0.683 1.132 1.716
ENSG00000168385 E045 1.5251691 4.490743e-02 8.273701e-01 8.914603e-01 2 241325967 241325992 26 + 0.356 0.367 0.065
ENSG00000168385 E046 877.0200472 1.042046e-03 1.253929e-10 2.177787e-09 2 241325993 241326113 121 + 2.875 2.834 -0.137
ENSG00000168385 E047 837.7085088 8.595354e-04 1.459847e-09 2.098040e-08 2 241335126 241335212 87 + 2.852 2.826 -0.090
ENSG00000168385 E048 8.5352014 1.787292e-02 2.708161e-03 9.398124e-03 2 241335213 241335321 109 + 0.974 0.564 -1.663
ENSG00000168385 E049 5.6958382 2.865817e-03 1.385235e-02 3.789201e-02 2 241335322 241335351 30 + 0.817 0.477 -1.475
ENSG00000168385 E050 12.6455402 7.965112e-03 1.335006e-02 3.673549e-02 2 241335352 241335640 289 + 1.106 0.884 -0.822
ENSG00000168385 E051 7.4413065 2.174057e-03 1.267985e-01 2.296974e-01 2 241335843 241335945 103 + 0.885 0.753 -0.516
ENSG00000168385 E052 4.9801033 3.351353e-03 2.619242e-01 3.996452e-01 2 241335946 241335958 13 + 0.736 0.637 -0.417
ENSG00000168385 E053 7.2092522 2.355710e-03 6.521562e-02 1.353918e-01 2 241335959 241335974 16 + 0.885 0.699 -0.739
ENSG00000168385 E054 790.2407357 2.384449e-04 2.592154e-11 5.044955e-10 2 241335975 241336098 124 + 2.824 2.812 -0.042
ENSG00000168385 E055 11.0706840 1.576392e-03 1.662656e-01 2.833417e-01 2 241336099 241336381 283 + 1.029 0.954 -0.277
ENSG00000168385 E056 14.9506065 1.469116e-03 5.983083e-02 1.263251e-01 2 241336785 241337098 314 + 1.152 1.041 -0.399
ENSG00000168385 E057 7.1714939 2.424589e-03 2.595916e-01 3.970107e-01 2 241337311 241337381 71 + 0.784 1.014 0.876
ENSG00000168385 E058 742.3489452 9.759767e-05 3.104076e-16 1.256646e-14 2 241337382 241337475 94 + 2.801 2.768 -0.109
ENSG00000168385 E059 636.7395711 1.261487e-04 2.621283e-20 1.733919e-18 2 241337476 241337516 41 + 2.741 2.676 -0.216
ENSG00000168385 E060 17.6848885 3.060718e-02 3.932102e-01 5.371035e-01 2 241337517 241337672 156 + 1.203 1.175 -0.099
ENSG00000168385 E061 715.4156484 8.533943e-05 6.633560e-19 3.730211e-17 2 241337673 241337719 47 + 2.788 2.742 -0.154
ENSG00000168385 E062 833.1723569 9.179862e-05 4.968291e-24 4.948989e-22 2 241337720 241337790 71 + 2.856 2.800 -0.187
ENSG00000168385 E063 974.3890960 4.852367e-04 9.071091e-12 1.903302e-10 2 241342992 241343093 102 + 2.916 2.896 -0.067
ENSG00000168385 E064 1161.3686783 4.727942e-04 4.401961e-05 2.513982e-04 2 241343752 241343897 146 + 2.981 3.013 0.106
ENSG00000168385 E065 1000.7642550 6.647960e-04 3.020915e-06 2.258676e-05 2 241346166 241346249 84 + 2.920 2.932 0.039
ENSG00000168385 E066 14.1627607 3.403795e-02 3.985814e-01 5.423170e-01 2 241346250 241346602 353 + 1.111 1.072 -0.141
ENSG00000168385 E067 751.4740375 1.321795e-04 1.960063e-02 5.062898e-02 2 241348134 241348191 58 + 2.785 2.848 0.209
ENSG00000168385 E068 467.1258593 1.468768e-04 9.541387e-02 1.835114e-01 2 241350073 241350086 14 + 2.577 2.643 0.221
ENSG00000168385 E069 787.5660923 7.065867e-04 8.500896e-01 9.070051e-01 2 241350087 241350203 117 + 2.797 2.889 0.307
ENSG00000168385 E070 11.4201530 1.914928e-03 5.134595e-02 1.115431e-01 2 241351943 241351966 24 + 0.936 1.230 1.070
ENSG00000168385 E071 6643.4746841 4.313507e-03 2.911418e-17 1.337762e-15 2 241351967 241354027 2061 + 3.666 3.939 0.909