ENSG00000168137

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000407969 ENSG00000168137 HEK293_OSMI2_2hA HEK293_TMG_2hB SETD5 protein_coding protein_coding 42.15489 44.30527 35.62852 1.027975 2.313403 -0.3143664 5.384220 2.182063 3.632480 1.1831825 0.9153623 0.7326316 0.13007500 0.04980000 0.09936667 0.049566667 6.718046e-01 7.528918e-13 FALSE TRUE
ENST00000421188 ENSG00000168137 HEK293_OSMI2_2hA HEK293_TMG_2hB SETD5 protein_coding protein_coding 42.15489 44.30527 35.62852 1.027975 2.313403 -0.3143664 2.694441 3.207305 2.587657 0.7345350 1.3029772 -0.3086413 0.05914583 0.07283333 0.06816667 -0.004666667 8.849093e-01 7.528918e-13 FALSE TRUE
ENST00000466826 ENSG00000168137 HEK293_OSMI2_2hA HEK293_TMG_2hB SETD5 protein_coding retained_intron 42.15489 44.30527 35.62852 1.027975 2.313403 -0.3143664 9.191608 21.444128 0.377558 1.2786313 0.3775580 -5.7906991 0.19649167 0.48506667 0.01216667 -0.472900000 2.484300e-03 7.528918e-13 FALSE FALSE
MSTRG.22446.15 ENSG00000168137 HEK293_OSMI2_2hA HEK293_TMG_2hB SETD5 protein_coding   42.15489 44.30527 35.62852 1.027975 2.313403 -0.3143664 2.818127 2.483397 3.345853 1.3700371 0.6595414 0.4285668 0.07226667 0.05466667 0.09736667 0.042700000 7.266662e-01 7.528918e-13 FALSE TRUE
MSTRG.22446.16 ENSG00000168137 HEK293_OSMI2_2hA HEK293_TMG_2hB SETD5 protein_coding   42.15489 44.30527 35.62852 1.027975 2.313403 -0.3143664 2.510790 2.054870 3.498203 0.5549510 0.8713920 0.7646811 0.06065417 0.04660000 0.09616667 0.049566667 2.110313e-01 7.528918e-13 FALSE TRUE
MSTRG.22446.7 ENSG00000168137 HEK293_OSMI2_2hA HEK293_TMG_2hB SETD5 protein_coding   42.15489 44.30527 35.62852 1.027975 2.313403 -0.3143664 2.607813 1.703632 4.350849 0.1416784 0.2655402 1.3475514 0.06573750 0.03846667 0.12240000 0.083933333 7.528918e-13 7.528918e-13 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

No results under this category.

Splicing

All exons whithin this gene region are shown and numbering below.

No results under this category.

Transcripts

All isoforms whithin this gene region are shown below.

No results under this category.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000168137 E001 0.0000000       3 9397550 9397580 31 +      
ENSG00000168137 E002 0.0000000       3 9397581 9397614 34 +      
ENSG00000168137 E003 4.5459691 0.0627388472 5.552584e-02 1.188799e-01 3 9397615 9397799 185 +      
ENSG00000168137 E004 2.9067467 0.0053882579 5.307034e-01 6.632462e-01 3 9397800 9397804 5 +      
ENSG00000168137 E005 6.2250621 0.0026708284 6.063155e-01 7.264995e-01 3 9397805 9397826 22 +      
ENSG00000168137 E006 6.6472162 0.0024980232 2.148806e-01 3.442986e-01 3 9397827 9397840 14 +      
ENSG00000168137 E007 10.7436204 0.0015865579 1.425950e-01 2.515710e-01 3 9397841 9397855 15 +      
ENSG00000168137 E008 11.0620534 0.0015668335 5.609573e-02 1.198710e-01 3 9397856 9397862 7 +      
ENSG00000168137 E009 12.7561276 0.0013663617 2.477890e-02 6.141945e-02 3 9397863 9397872 10 +      
ENSG00000168137 E010 22.4340712 0.0009153902 7.717501e-03 2.306885e-02 3 9397873 9397880 8 +      
ENSG00000168137 E011 28.1809458 0.0007991016 7.294721e-04 3.004855e-03 3 9397881 9397890 10 +      
ENSG00000168137 E012 29.5720779 0.0026600595 3.541441e-04 1.596202e-03 3 9397891 9397895 5 +      
ENSG00000168137 E013 33.1869571 0.0037505811 1.274109e-04 6.474161e-04 3 9397896 9397899 4 +      
ENSG00000168137 E014 33.1784243 0.0078268895 5.440466e-04 2.324702e-03 3 9397900 9397903 4 +      
ENSG00000168137 E015 53.8467021 0.0101805172 7.616986e-04 3.120947e-03 3 9397904 9397977 74 +      
ENSG00000168137 E016 0.8136886 0.1087183553 7.827990e-01 8.605420e-01 3 9415698 9415732 35 +      
ENSG00000168137 E017 4.6761631 0.0034565964 2.028848e-01 3.298268e-01 3 9421323 9421478 156 +      
ENSG00000168137 E018 4.7440296 0.0307305830 4.130808e-01 5.566164e-01 3 9421479 9421545 67 +      
ENSG00000168137 E019 4.5750253 0.0604551165 1.737276e-01 2.930293e-01 3 9421546 9421592 47 +      
ENSG00000168137 E020 25.4647503 0.0007409633 2.085533e-02 5.328268e-02 3 9422723 9423107 385 +      
ENSG00000168137 E021 14.0553696 0.0035384010 2.126174e-02 5.413869e-02 3 9423108 9423257 150 +      
ENSG00000168137 E022 0.5085815 0.1856149400 5.398362e-01 6.710616e-01 3 9424218 9424466 249 +      
ENSG00000168137 E023 67.4769600 0.0010535596 6.022276e-06 4.210126e-05 3 9424467 9424526 60 +      
ENSG00000168137 E024 3.6859629 0.0067696936 3.306010e-01 4.742034e-01 3 9424527 9424539 13 +      
ENSG00000168137 E025 0.3697384 0.0252086310 1.624182e-01 2.782870e-01 3 9426089 9426175 87 +      
ENSG00000168137 E026 93.0492199 0.0005440630 9.103776e-05 4.799586e-04 3 9428823 9428924 102 +      
ENSG00000168137 E027 102.0588018 0.0012264620 1.147030e-07 1.152609e-06 3 9428925 9429009 85 +      
ENSG00000168137 E028 1.0393897 0.0119099314 6.362165e-03 1.956232e-02 3 9429010 9429325 316 +      
ENSG00000168137 E029 2.4474842 0.0216903372 1.372270e-01 2.442207e-01 3 9429569 9429667 99 +      
ENSG00000168137 E030 126.8500882 0.0002597046 3.873776e-06 2.827491e-05 3 9429827 9430051 225 +      
ENSG00000168137 E031 75.2288489 0.0140832742 1.912865e-01 3.153436e-01 3 9430052 9431707 1656 +      
ENSG00000168137 E032 7.1413973 0.0088944421 3.087932e-06 2.303601e-05 3 9431708 9432324 617 +      
ENSG00000168137 E033 34.2099107 0.0010453294 3.975581e-09 5.275720e-08 3 9433370 9433484 115 +      
ENSG00000168137 E034 27.8024533 0.0011496689 1.694416e-05 1.068120e-04 3 9433485 9433531 47 +      
ENSG00000168137 E035 25.7248078 0.0148973321 1.976469e-03 7.153782e-03 3 9433532 9433562 31 +      
ENSG00000168137 E036 114.8609409 0.0132242623 2.870290e-05 1.715464e-04 3 9433845 9433950 106 +      
ENSG00000168137 E037 0.5891098 0.0184159518 5.154309e-02 1.118956e-01 3 9433993 9434044 52 +      
ENSG00000168137 E038 7.3418728 0.0022959219 1.349903e-02 3.707542e-02 3 9434045 9434181 137 +      
ENSG00000168137 E039 1.0246279 0.1409063320 1.610995e-02 4.298142e-02 3 9434182 9434276 95 +      
ENSG00000168137 E040 52.4903029 0.0053050162 3.848625e-05 2.227516e-04 3 9434277 9434333 57 +      
ENSG00000168137 E041 154.1295293 0.0112338398 7.961574e-07 6.753969e-06 3 9434334 9434485 152 +      
ENSG00000168137 E042 4.8111981 0.0032458247 5.099940e-05 2.868245e-04 3 9434486 9434589 104 +      
ENSG00000168137 E043 11.6724142 0.0014271528 1.954214e-05 1.215270e-04 3 9434590 9434630 41 +      
ENSG00000168137 E044 6.8542756 0.0045809790 5.403833e-08 5.782535e-07 3 9434631 9434823 193 +      
ENSG00000168137 E045 106.2116206 0.0158089987 2.734144e-04 1.271511e-03 3 9434824 9434882 59 +      
ENSG00000168137 E046 0.2966881 0.0271991847 2.424223e-01   3 9434883 9434901 19 +      
ENSG00000168137 E047 0.2214452 0.0388509216 4.243147e-01   3 9435646 9435727 82 +      
ENSG00000168137 E048 158.5233486 0.0049206306 1.906370e-06 1.489856e-05 3 9435728 9435906 179 +      
ENSG00000168137 E049 0.6727692 0.0764232256 8.819409e-01 9.283586e-01 3 9436068 9436140 73 +      
ENSG00000168137 E050 10.9054810 0.0015724575 3.951757e-02 9.013780e-02 3 9436850 9436888 39 +      
ENSG00000168137 E051 184.8374010 0.0061162313 3.528237e-05 2.061034e-04 3 9440456 9440698 243 +      
ENSG00000168137 E052 140.5962408 0.0098778251 1.106113e-02 3.131021e-02 3 9441593 9441741 149 +      
ENSG00000168137 E053 0.0000000       3 9441742 9442127 386 +      
ENSG00000168137 E054 78.1437384 0.0097314294 5.289556e-04 2.267789e-03 3 9442128 9442166 39 +      
ENSG00000168137 E055 56.4227915 0.0118986831 3.701307e-03 1.230065e-02 3 9442167 9442169 3 +      
ENSG00000168137 E056 96.5224455 0.0121223744 3.129963e-03 1.064812e-02 3 9442170 9442245 76 +      
ENSG00000168137 E057 0.7500885 0.1256464049 2.696832e-01 4.082178e-01 3 9442246 9442614 369 +      
ENSG00000168137 E058 0.4502799 0.0286920594 1.098785e-01 2.053666e-01 3 9442615 9442889 275 +      
ENSG00000168137 E059 0.6234514 0.4716572620 6.128268e-01 7.316868e-01 3 9442890 9443307 418 +      
ENSG00000168137 E060 103.7746012 0.0018400965 8.958261e-06 6.023053e-05 3 9443308 9443417 110 +      
ENSG00000168137 E061 1.3327538 0.0289883038 4.428161e-01 5.843685e-01 3 9443418 9444859 1442 +      
ENSG00000168137 E062 2.7970735 0.0055893447 5.916352e-01 7.143673e-01 3 9445045 9445047 3 +      
ENSG00000168137 E063 227.9822165 0.0013166625 1.211458e-09 1.766799e-08 3 9445048 9445300 253 +      
ENSG00000168137 E064 0.7792333 0.0219517249 2.270411e-01 3.588631e-01 3 9445301 9445619 319 +      
ENSG00000168137 E065 0.4417471 0.6487882204 3.283778e-01 4.718579e-01 3 9445620 9445656 37 +      
ENSG00000168137 E066 140.1212966 0.0006891755 5.248434e-05 2.941729e-04 3 9445657 9445740 84 +      
ENSG00000168137 E067 0.3686942 0.0306179772 9.136040e-01 9.492808e-01 3 9446678 9447049 372 +      
ENSG00000168137 E068 92.9972697 0.0011476023 4.727018e-04 2.055782e-03 3 9447050 9447070 21 +      
ENSG00000168137 E069 207.4420518 0.0019901249 1.022167e-05 6.779628e-05 3 9447071 9447307 237 +      
ENSG00000168137 E070 61.4392178 0.0044973369 8.994696e-03 2.626600e-02 3 9447686 9447686 1 +      
ENSG00000168137 E071 242.1964031 0.0098854493 5.343635e-03 1.686692e-02 3 9447687 9447969 283 +      
ENSG00000168137 E072 92.7208096 0.0165308337 1.368937e-01 2.437576e-01 3 9447970 9448006 37 +      
ENSG00000168137 E073 0.3332198 0.0295368109 9.156567e-01   3 9448007 9448387 381 +      
ENSG00000168137 E074 196.6802348 0.0069211378 3.401995e-02 7.979914e-02 3 9448388 9448558 171 +      
ENSG00000168137 E075 149.5246252 0.0040436666 6.537783e-02 1.356720e-01 3 9448559 9448630 72 +      
ENSG00000168137 E076 0.4482035 0.0286584710 1.098591e-01 2.053504e-01 3 9449480 9449592 113 +      
ENSG00000168137 E077 6.7711823 0.0248031810 4.166778e-01 5.600650e-01 3 9452888 9452951 64 +      
ENSG00000168137 E078 172.9624968 0.0002507120 3.664705e-01 5.108071e-01 3 9453739 9453868 130 +      
ENSG00000168137 E079 0.3289534 0.0294768084 9.154370e-01   3 9453869 9454004 136 +      
ENSG00000168137 E080 8.0953506 0.0024295001 2.880927e-01 4.286332e-01 3 9454005 9454101 97 +      
ENSG00000168137 E081 0.1817044 0.0393289205 4.254622e-01   3 9454102 9454586 485 +      
ENSG00000168137 E082 1.7348593 0.0080469150 5.097490e-01 6.450310e-01 3 9464410 9464424 15 +      
ENSG00000168137 E083 271.3315975 0.0001888288 2.563388e-01 3.932960e-01 3 9464425 9464672 248 +      
ENSG00000168137 E084 28.1300934 0.0008406004 1.519887e-07 1.490594e-06 3 9464673 9466248 1576 +      
ENSG00000168137 E085 36.3790486 0.0075411345 3.740795e-04 1.673908e-03 3 9467231 9468518 1288 +      
ENSG00000168137 E086 32.0845446 0.0106787986 1.582993e-01 2.728635e-01 3 9468519 9468575 57 +      
ENSG00000168137 E087 59.3217802 0.0004078576 9.212438e-13 2.275745e-11 3 9468576 9470458 1883 +      
ENSG00000168137 E088 303.1727926 0.0005013072 5.989357e-02 1.264309e-01 3 9470459 9470666 208 +      
ENSG00000168137 E089 286.1960461 0.0007083994 3.523618e-01 4.966364e-01 3 9470667 9470929 263 +      
ENSG00000168137 E090 3.1406539 0.0898596374 3.958418e-02 9.026257e-02 3 9472472 9473235 764 +      
ENSG00000168137 E091 229.5016468 0.0019999136 8.433121e-03 2.486815e-02 3 9473236 9473394 159 +      
ENSG00000168137 E092 133.1098349 0.0057734163 8.499398e-03 2.503631e-02 3 9473395 9473422 28 +      
ENSG00000168137 E093 209.0751513 0.0012556285 1.597316e-02 4.266994e-02 3 9473423 9473537 115 +      
ENSG00000168137 E094 2.2475908 0.0070032023 1.002440e-01 1.908541e-01 3 9473538 9474448 911 +      
ENSG00000168137 E095 222.0184223 0.0021926719 4.906576e-02 1.074931e-01 3 9474449 9474582 134 +      
ENSG00000168137 E096 8.4978560 0.0537295662 3.968677e-03 1.305461e-02 3 9474583 9474793 211 +      
ENSG00000168137 E097 11.0148065 0.0207055510 7.854967e-05 4.211167e-04 3 9474794 9475049 256 +      
ENSG00000168137 E098 4.7147606 0.0034438472 2.935561e-02 7.068920e-02 3 9475050 9475067 18 +      
ENSG00000168137 E099 178.4072027 0.0009330585 1.811560e-02 4.737837e-02 3 9475068 9475156 89 +      
ENSG00000168137 E100 36.6248945 0.0006300737 2.962281e-02 7.122037e-02 3 9475157 9475482 326 +      
ENSG00000168137 E101 2332.5209551 0.0082156581 5.318617e-18 2.689792e-16 3 9475483 9478154 2672 +      
ENSG00000168137 E102 2.1767175 0.0071783418 5.922719e-01 7.148438e-01 3 9478601 9479240 640 +