ENSG00000165795

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000397853 ENSG00000165795 HEK293_OSMI2_2hA HEK293_TMG_2hB NDRG2 protein_coding protein_coding 20.81504 33.1427 18.39378 1.665494 0.6158318 -0.8491239 1.6929022 4.0348165 0.4935368 0.3948801 0.4935368 -3.0059052 0.06735000 0.1219000 0.02876667 -0.09313333 0.11349969 1.561791e-06 FALSE TRUE
ENST00000403829 ENSG00000165795 HEK293_OSMI2_2hA HEK293_TMG_2hB NDRG2 protein_coding protein_coding 20.81504 33.1427 18.39378 1.665494 0.6158318 -0.8491239 1.6712356 3.7324526 1.5591286 1.8880875 0.7899712 -1.2540205 0.07582917 0.1073000 0.08200000 -0.02530000 0.98826898 1.561791e-06 FALSE TRUE
ENST00000553793 ENSG00000165795 HEK293_OSMI2_2hA HEK293_TMG_2hB NDRG2 protein_coding retained_intron 20.81504 33.1427 18.39378 1.665494 0.6158318 -0.8491239 0.3837312 0.1536501 1.0902132 0.1536501 0.2748570 2.7490969 0.02102500 0.0043000 0.05943333 0.05513333 0.02876517 1.561791e-06 FALSE FALSE
ENST00000553867 ENSG00000165795 HEK293_OSMI2_2hA HEK293_TMG_2hB NDRG2 protein_coding protein_coding 20.81504 33.1427 18.39378 1.665494 0.6158318 -0.8491239 1.0690665 0.0000000 1.8000330 0.0000000 1.0182693 7.4998722 0.06340833 0.0000000 0.09466667 0.09466667 0.13287376 1.561791e-06 FALSE TRUE
ENST00000554143 ENSG00000165795 HEK293_OSMI2_2hA HEK293_TMG_2hB NDRG2 protein_coding protein_coding 20.81504 33.1427 18.39378 1.665494 0.6158318 -0.8491239 3.9924611 5.9138056 3.0072675 0.6254933 0.4733996 -0.9732817 0.18472917 0.1794333 0.16400000 -0.01543333 0.88304627 1.561791e-06 FALSE TRUE
MSTRG.9168.4 ENSG00000165795 HEK293_OSMI2_2hA HEK293_TMG_2hB NDRG2 protein_coding   20.81504 33.1427 18.39378 1.665494 0.6158318 -0.8491239 7.2224471 14.3071678 4.8782383 0.5720271 0.9715510 -1.5503596 0.33719167 0.4357333 0.26526667 -0.17046667 0.12873178 1.561791e-06 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000165795 E001 0.1482932 0.0416841573 1.000000e+00   14 21016763 21016763 1 - 0.000 0.081 7.929
ENSG00000165795 E002 0.4438354 0.1148175506 8.315043e-01 8.943937e-01 14 21016764 21016771 8 - 0.181 0.148 -0.347
ENSG00000165795 E003 2.1064825 0.1761337184 1.706447e-01 2.889949e-01 14 21016772 21016772 1 - 0.181 0.528 2.202
ENSG00000165795 E004 17.5977731 0.0405717154 2.578774e-01 3.950594e-01 14 21016773 21016810 38 - 1.091 1.251 0.571
ENSG00000165795 E005 25.1573786 0.0169856540 1.505334e-01 2.624029e-01 14 21016811 21016837 27 - 1.243 1.396 0.535
ENSG00000165795 E006 25.5271170 0.0167513001 1.298301e-01 2.339216e-01 14 21016838 21016850 13 - 1.243 1.404 0.560
ENSG00000165795 E007 39.0720580 0.0076201773 4.545318e-02 1.010274e-01 14 21016851 21016914 64 - 1.419 1.581 0.554
ENSG00000165795 E008 229.4296614 0.0019678895 1.169353e-02 3.280565e-02 14 21016915 21017220 306 - 2.231 2.321 0.302
ENSG00000165795 E009 139.0104760 0.0037365081 9.325919e-03 2.709849e-02 14 21017221 21017302 82 - 1.989 2.113 0.417
ENSG00000165795 E010 247.1030803 0.0019167989 5.269052e-04 2.260379e-03 14 21017303 21017480 178 - 2.239 2.359 0.402
ENSG00000165795 E011 310.9061741 0.0019263704 5.555406e-03 1.743399e-02 14 21017481 21017746 266 - 2.360 2.449 0.297
ENSG00000165795 E012 100.8332041 0.0013241858 1.478623e-01 2.587768e-01 14 21017747 21017762 16 - 1.891 1.957 0.220
ENSG00000165795 E013 95.4519403 0.0005133649 2.284603e-01 3.605768e-01 14 21017987 21017991 5 - 1.877 1.930 0.179
ENSG00000165795 E014 94.0628624 0.0003235901 2.210709e-01 3.516927e-01 14 21017992 21017994 3 - 1.871 1.924 0.180
ENSG00000165795 E015 100.6891537 0.0003233847 1.507962e-01 2.627560e-01 14 21017995 21018007 13 - 1.894 1.955 0.205
ENSG00000165795 E016 108.0193220 0.0003038032 4.047827e-02 9.189869e-02 14 21018008 21018019 12 - 1.908 1.992 0.281
ENSG00000165795 E017 127.5450565 0.0018723909 3.820672e-01 5.263180e-01 14 21018020 21018038 19 - 2.016 2.054 0.129
ENSG00000165795 E018 1.3779055 0.2765294344 1.696692e-01 2.877750e-01 14 21018039 21018203 165 - 0.556 0.214 -2.024
ENSG00000165795 E019 152.9070651 0.0032975060 5.272449e-01 6.603667e-01 14 21018204 21018239 36 - 2.100 2.129 0.098
ENSG00000165795 E020 4.8047601 0.0034788695 2.982512e-03 1.021159e-02 14 21018240 21018456 217 - 0.966 0.565 -1.628
ENSG00000165795 E021 132.0502899 0.0017254578 3.957619e-01 5.395464e-01 14 21018457 21018471 15 - 2.082 2.050 -0.104
ENSG00000165795 E022 150.0266326 0.0004039264 1.641752e-01 2.806026e-01 14 21018472 21018504 33 - 2.147 2.103 -0.146
ENSG00000165795 E023 2.3595558 0.0077528884 6.236073e-03 1.923330e-02 14 21018505 21018626 122 - 0.751 0.307 -2.174
ENSG00000165795 E024 1.4006945 0.1659091436 9.106050e-02 1.768024e-01 14 21018627 21018663 37 - 0.553 0.214 -2.019
ENSG00000165795 E025 1.3514018 0.0935265152 2.510201e-01 3.871579e-01 14 21018664 21018762 99 - 0.486 0.262 -1.313
ENSG00000165795 E026 146.4868230 0.0002412686 8.973778e-01 9.384534e-01 14 21018763 21018795 33 - 2.100 2.106 0.022
ENSG00000165795 E027 106.5719416 0.0002721690 9.583201e-01 9.778974e-01 14 21018796 21018798 3 - 1.965 1.969 0.014
ENSG00000165795 E028 120.4625028 0.0002496451 2.288318e-01 3.610594e-01 14 21018799 21018814 16 - 1.984 2.031 0.157
ENSG00000165795 E029 107.0407941 0.0002771641 6.549221e-02 1.358618e-01 14 21019116 21019120 5 - 1.911 1.986 0.253
ENSG00000165795 E030 147.3804570 0.0002221438 3.797828e-02 8.731003e-02 14 21019121 21019145 25 - 2.051 2.123 0.243
ENSG00000165795 E031 154.2985541 0.0002133431 3.520748e-01 4.963167e-01 14 21019146 21019160 15 - 2.103 2.136 0.109
ENSG00000165795 E032 0.1515154 0.0438464001 1.906201e-01   14 21019614 21019638 25 - 0.181 0.000 -13.464
ENSG00000165795 E033 129.4740890 0.0002598439 2.788505e-01 4.185209e-01 14 21019639 21019647 9 - 2.022 2.063 0.137
ENSG00000165795 E034 135.1899555 0.0007887508 8.154638e-01 8.831659e-01 14 21019648 21019669 22 - 2.064 2.075 0.037
ENSG00000165795 E035 140.8098256 0.0024524829 7.996824e-01 8.722336e-01 14 21019670 21019697 28 - 2.096 2.089 -0.025
ENSG00000165795 E036 140.4883171 0.0028269040 8.909340e-01 9.343555e-01 14 21019698 21019742 45 - 2.081 2.090 0.030
ENSG00000165795 E037 122.9672939 0.0015767203 9.054438e-01 9.438044e-01 14 21019920 21019947 28 - 2.026 2.034 0.025
ENSG00000165795 E038 107.3608902 0.0007173027 8.661215e-01 9.177959e-01 14 21019948 21019966 19 - 1.965 1.974 0.030
ENSG00000165795 E039 99.3590060 0.0003128954 1.427632e-01 2.517974e-01 14 21019967 21019969 3 - 1.979 1.924 -0.186
ENSG00000165795 E040 108.8149112 0.0003079370 2.833920e-01 4.234874e-01 14 21019970 21019976 7 - 2.007 1.968 -0.129
ENSG00000165795 E041 5.5627871 0.0029002660 3.101662e-03 1.056493e-02 14 21019977 21020119 143 - 1.012 0.632 -1.498
ENSG00000165795 E042 3.0863748 0.0070469970 8.672597e-03 2.546572e-02 14 21020120 21020263 144 - 0.824 0.422 -1.787
ENSG00000165795 E043 1.1103636 0.0108647759 1.983308e-02 5.113317e-02 14 21020264 21020291 28 - 0.554 0.149 -2.651
ENSG00000165795 E044 1.3317202 0.0099623171 5.808159e-01 7.055124e-01 14 21020292 21020362 71 - 0.406 0.307 -0.592
ENSG00000165795 E045 1.4520025 0.0662884486 3.037276e-02 7.269870e-02 14 21020363 21020447 85 - 0.613 0.209 -2.329
ENSG00000165795 E046 1.8133098 0.0213878967 3.398923e-03 1.143487e-02 14 21020448 21020464 17 - 0.710 0.209 -2.739
ENSG00000165795 E047 1.9844051 0.0649383984 1.571397e-02 4.209269e-02 14 21020465 21020495 31 - 0.710 0.262 -2.313
ENSG00000165795 E048 115.4314508 0.0002687553 3.812796e-01 5.255817e-01 14 21020496 21020506 11 - 2.026 1.996 -0.100
ENSG00000165795 E049 119.4331514 0.0002594500 5.501917e-01 6.798430e-01 14 21020507 21020528 22 - 2.032 2.013 -0.065
ENSG00000165795 E050 99.6282567 0.0003127030 2.945437e-01 4.356379e-01 14 21020529 21020532 4 - 1.968 1.928 -0.132
ENSG00000165795 E051 106.0659564 0.0003048742 7.600911e-01 8.442847e-01 14 21020533 21020548 16 - 1.972 1.963 -0.032
ENSG00000165795 E052 91.6034671 0.0003528969 4.456795e-01 5.872186e-01 14 21020549 21020551 3 - 1.922 1.892 -0.099
ENSG00000165795 E053 90.4188942 0.0003386430 5.620873e-01 6.897684e-01 14 21020552 21020553 2 - 1.911 1.889 -0.074
ENSG00000165795 E054 90.8919736 0.0003298984 6.667371e-01 7.741421e-01 14 21020554 21020557 4 - 1.908 1.892 -0.053
ENSG00000165795 E055 89.4268226 0.0003819850 6.968204e-01 7.970832e-01 14 21020558 21020558 1 - 1.900 1.885 -0.048
ENSG00000165795 E056 87.9437018 0.0004563896 6.587522e-01 7.677742e-01 14 21020559 21020560 2 - 1.894 1.877 -0.057
ENSG00000165795 E057 105.3162456 0.0002805274 5.299987e-01 6.627152e-01 14 21020561 21020575 15 - 1.977 1.955 -0.074
ENSG00000165795 E058 85.6941631 0.0003222978 3.092270e-01 4.514931e-01 14 21020576 21020582 7 - 1.903 1.861 -0.138
ENSG00000165795 E059 2.6184526 0.0810828298 6.409979e-03 1.968729e-02 14 21020583 21020783 201 - 0.824 0.310 -2.448
ENSG00000165795 E060 93.3209588 0.0003156359 2.600061e-01 3.974837e-01 14 21020784 21020797 14 - 1.943 1.899 -0.147
ENSG00000165795 E061 81.3331642 0.0003210439 7.925178e-01 8.673307e-01 14 21020798 21020803 6 - 1.858 1.849 -0.032
ENSG00000165795 E062 79.4530342 0.0003496617 8.590748e-01 9.130671e-01 14 21020804 21020807 4 - 1.846 1.840 -0.020
ENSG00000165795 E063 76.6803921 0.0003317313 6.058056e-01 7.261136e-01 14 21020808 21020808 1 - 1.843 1.822 -0.071
ENSG00000165795 E064 91.8668648 0.0003141282 9.413556e-01 9.671460e-01 14 21020809 21020826 18 - 1.905 1.905 -0.003
ENSG00000165795 E065 73.7703239 0.0003572029 9.893465e-01 9.973433e-01 14 21020827 21020828 2 - 1.809 1.812 0.009
ENSG00000165795 E066 74.3175003 0.0003622492 9.182763e-01 9.523649e-01 14 21020829 21020829 1 - 1.809 1.816 0.023
ENSG00000165795 E067 83.6377764 0.0013798478 7.699461e-01 8.514622e-01 14 21020830 21020844 15 - 1.874 1.862 -0.038
ENSG00000165795 E068 1.7498365 0.1215228566 2.692499e-03 9.351308e-03 14 21020845 21020968 124 - 0.753 0.151 -3.489
ENSG00000165795 E069 1.5114369 0.0164887113 9.670624e-02 1.854398e-01 14 21020969 21021039 71 - 0.554 0.261 -1.648
ENSG00000165795 E070 2.1254502 0.1756047157 1.710573e-01 2.895591e-01 14 21021040 21021251 212 - 0.663 0.351 -1.537
ENSG00000165795 E071 1.8089563 0.0088938916 6.792451e-03 2.068360e-02 14 21021417 21021586 170 - 0.710 0.260 -2.331
ENSG00000165795 E072 1.3640767 0.0096654282 1.681200e-04 8.271177e-04 14 21021587 21021675 89 - 0.710 0.081 -4.329
ENSG00000165795 E073 1.8403929 0.0075559649 9.249917e-05 4.867692e-04 14 21021676 21021711 36 - 0.789 0.149 -3.650
ENSG00000165795 E074 1.6909538 0.0086429778 2.826019e-04 1.308863e-03 14 21021712 21021746 35 - 0.751 0.149 -3.498
ENSG00000165795 E075 1.5781601 0.0352944590 9.725417e-03 2.808786e-02 14 21021747 21021754 8 - 0.664 0.209 -2.549
ENSG00000165795 E076 2.7166218 0.0314247451 3.178381e-02 7.543374e-02 14 21021755 21021816 62 - 0.751 0.389 -1.679
ENSG00000165795 E077 73.7477952 0.0110457884 7.092774e-01 8.067149e-01 14 21021817 21021821 5 - 1.791 1.817 0.087
ENSG00000165795 E078 84.8096784 0.0003930345 5.060509e-01 6.417419e-01 14 21021822 21021836 15 - 1.891 1.865 -0.089
ENSG00000165795 E079 79.5586097 0.0003686007 3.347424e-01 4.784700e-01 14 21021837 21021840 4 - 1.874 1.833 -0.136
ENSG00000165795 E080 85.4667914 0.0003460023 2.896673e-01 4.303819e-01 14 21021841 21021856 16 - 1.905 1.863 -0.144
ENSG00000165795 E081 83.6982985 0.0004476810 7.698470e-02 1.546639e-01 14 21021857 21021869 13 - 1.916 1.843 -0.248
ENSG00000165795 E082 82.4555482 0.0003769678 1.521084e-01 2.645533e-01 14 21021870 21021879 10 - 1.900 1.840 -0.201
ENSG00000165795 E083 92.0478157 0.0005385832 3.127377e-01 4.552611e-01 14 21022062 21022087 26 - 1.932 1.892 -0.135
ENSG00000165795 E084 95.5044165 0.0024015325 2.386055e-01 3.725202e-01 14 21022088 21022108 21 - 1.955 1.903 -0.176
ENSG00000165795 E085 124.8960571 0.0013979546 2.504874e-01 3.865253e-01 14 21022109 21022146 38 - 2.064 2.021 -0.145
ENSG00000165795 E086 116.0954308 0.0004103919 1.363952e-01 2.430298e-01 14 21022147 21022165 19 - 2.041 1.988 -0.178
ENSG00000165795 E087 111.5807171 0.0002627438 4.663588e-01 6.059149e-01 14 21022166 21022182 17 - 2.007 1.982 -0.084
ENSG00000165795 E088 2.9019182 0.0269317406 2.420948e-06 1.849510e-05 14 21022183 21022343 161 - 0.967 0.208 -3.747
ENSG00000165795 E089 166.8259067 0.0002515402 9.089018e-01 9.461282e-01 14 21022392 21022497 106 - 2.164 2.163 -0.004
ENSG00000165795 E090 4.5621112 0.0034126242 2.053215e-04 9.867963e-04 14 21022498 21022820 323 - 1.012 0.513 -2.040
ENSG00000165795 E091 16.7545943 0.0010919519 2.263110e-01 3.579719e-01 14 21022864 21022879 16 - 1.268 1.163 -0.372
ENSG00000165795 E092 17.7865920 0.0010344918 3.757010e-01 5.201057e-01 14 21022880 21022905 26 - 1.268 1.193 -0.266
ENSG00000165795 E093 4.2740220 0.0040787582 4.709396e-10 7.405220e-09 14 21022906 21023240 335 - 1.126 0.260 -3.913
ENSG00000165795 E094 118.4573130 0.0002689996 3.754552e-01 5.198895e-01 14 21023241 21023313 73 - 2.035 2.004 -0.101
ENSG00000165795 E095 66.8025939 0.0003912411 6.583306e-01 7.675173e-01 14 21023314 21023321 8 - 1.780 1.761 -0.065
ENSG00000165795 E096 3.8278313 0.0045819786 5.483981e-05 3.059077e-04 14 21023322 21023740 419 - 0.990 0.422 -2.417
ENSG00000165795 E097 1.2274368 0.0253815364 6.757247e-04 2.810368e-03 14 21023889 21023975 87 - 0.664 0.081 -4.136
ENSG00000165795 E098 0.7427016 0.0156422216 8.081009e-04 3.287500e-03 14 21023976 21023985 10 - 0.554 0.000 -15.977
ENSG00000165795 E099 3.3911898 0.0152502382 6.222252e-01 7.390514e-01 14 21023986 21024029 44 - 0.664 0.587 -0.334
ENSG00000165795 E100 63.7489031 0.0005331087 7.270475e-01 8.199019e-01 14 21024030 21024096 67 - 1.733 1.753 0.067
ENSG00000165795 E101 1.8821214 0.0344823917 9.665212e-03 2.794031e-02 14 21024097 21024139 43 - 0.710 0.260 -2.330
ENSG00000165795 E102 1.0392760 0.2680881593 1.951078e-03 7.074855e-03 14 21024140 21024215 76 - 0.664 0.000 -15.268
ENSG00000165795 E103 0.4396707 0.0259337436 1.217585e-02 3.395169e-02 14 21024216 21024235 20 - 0.406 0.000 -15.167
ENSG00000165795 E104 2.0639013 0.0070913559 3.532741e-04 1.593038e-03 14 21024236 21024562 327 - 0.789 0.209 -3.065
ENSG00000165795 E105 1.4737473 0.0583407426 4.816511e-03 1.542044e-02 14 21024563 21024825 263 - 0.664 0.150 -3.123
ENSG00000165795 E106 0.1472490 0.0432960604 1.909255e-01   14 21024826 21024837 12 - 0.181 0.000 -13.467
ENSG00000165795 E107 0.2987644 0.0273876749 4.802790e-02   14 21024838 21024848 11 - 0.308 0.000 -14.582
ENSG00000165795 E108 2.6624994 0.0058358055 2.204471e-03 7.856546e-03 14 21024849 21025028 180 - 0.824 0.349 -2.204
ENSG00000165795 E109 43.2478710 0.0005714347 5.775576e-01 7.027893e-01 14 21025029 21025063 35 - 1.557 1.593 0.123
ENSG00000165795 E110 6.6844221 0.0386715182 8.465468e-01 9.046415e-01 14 21025064 21025140 77 - 0.857 0.837 -0.079
ENSG00000165795 E111 0.0000000       14 21025193 21025393 201 -      
ENSG00000165795 E112 0.1482932 0.0416841573 1.000000e+00   14 21025394 21025470 77 - 0.000 0.081 10.644
ENSG00000165795 E113 0.0000000       14 21025471 21025676 206 -      
ENSG00000165795 E114 0.0000000       14 21025677 21025848 172 -      
ENSG00000165795 E115 0.0000000       14 21046866 21046930 65 -      
ENSG00000165795 E116 0.0000000       14 21048262 21048533 272 -      
ENSG00000165795 E117 0.0000000       14 21070828 21070872 45 -