ENSG00000160796

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000443829 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding protein_coding 32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 2.5673916 5.5820546 0.4941100 0.6612770 0.3519468 -3.4715679 0.08196667 0.19453333 0.01853333 -0.17600000 0.0334561819 1.219714e-05 FALSE TRUE
ENST00000476095 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding retained_intron 32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 0.9357835 1.9860599 0.2805393 0.4424531 0.1430825 -2.7803500 0.02695833 0.06746667 0.01013333 -0.05733333 0.0607834818 1.219714e-05 FALSE FALSE
ENST00000477412 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding retained_intron 32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 5.0705790 5.9690789 3.5719858 1.3863526 0.8373539 -0.7391636 0.15516250 0.20820000 0.12403333 -0.08416667 0.4050533894 1.219714e-05 FALSE FALSE
ENST00000486870 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding retained_intron 32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 3.1522094 0.7581251 3.7931916 0.3801376 0.2827456 2.3077975 0.09461667 0.03023333 0.13273333 0.10250000 0.2799100874 1.219714e-05 FALSE FALSE
ENST00000651350 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding retained_intron 32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 3.9616975 2.3085158 4.0594094 0.5612490 0.3889072 0.8116179 0.12318333 0.07930000 0.14156667 0.06226667 0.0848818500 1.219714e-05 FALSE FALSE
ENST00000651450 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding retained_intron 32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 3.6619667 1.5918679 3.4733238 0.3247599 0.4699364 1.1207095 0.10822500 0.05436667 0.12113333 0.06676667 0.0004224372 1.219714e-05 FALSE FALSE
MSTRG.22869.1 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding   32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 0.6927283 0.6829274 2.9371138 0.3858915 1.0359616 2.0885267 0.02371250 0.02733333 0.10026667 0.07293333 0.4309116016 1.219714e-05 FALSE TRUE
MSTRG.22869.9 ENSG00000160796 HEK293_OSMI2_2hA HEK293_TMG_2hB NBEAL2 protein_coding   32.50057 28.78241 28.5468 3.703879 1.268148 -0.01185416 1.7668096 2.1754865 0.3667603 0.6720156 0.3667603 -2.5362355 0.05360417 0.07316667 0.01410000 -0.05906667 0.1118232469 1.219714e-05 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000160796 E001 0.1482932 0.0425654576 6.438304e-01   3 46979615 46979619 5 + 0.000 0.107 8.592
ENSG00000160796 E002 0.4772466 0.0211157525 7.586761e-01 8.432127e-01 3 46979620 46979658 39 + 0.139 0.194 0.580
ENSG00000160796 E003 1.1748942 0.1062720400 9.792258e-01 9.910670e-01 3 46979659 46979665 7 + 0.328 0.328 0.002
ENSG00000160796 E004 3.2313331 0.1980500783 3.195076e-01 4.625888e-01 3 46979666 46979682 17 + 0.741 0.515 -0.987
ENSG00000160796 E005 5.5928885 0.0696750345 5.069880e-01 6.426025e-01 3 46979683 46979706 24 + 0.869 0.764 -0.412
ENSG00000160796 E006 7.8877128 0.0044921376 4.427175e-02 9.888407e-02 3 46979707 46979740 34 + 1.062 0.840 -0.834
ENSG00000160796 E007 8.6691231 0.0019081345 1.374045e-02 3.763101e-02 3 46979741 46979750 10 + 1.115 0.857 -0.959
ENSG00000160796 E008 9.2290881 0.0017758092 2.883657e-03 9.921365e-03 3 46979751 46979761 11 + 1.163 0.857 -1.129
ENSG00000160796 E009 18.9348020 0.0036539179 2.671204e-04 1.245758e-03 3 46979762 46979847 86 + 1.443 1.153 -1.013
ENSG00000160796 E010 15.3177604 0.0209078818 1.457800e-02 3.954064e-02 3 46979848 46979855 8 + 1.344 1.087 -0.907
ENSG00000160796 E011 23.8361454 0.0188434482 7.429477e-03 2.233512e-02 3 46979856 46979912 57 + 1.523 1.271 -0.871
ENSG00000160796 E012 0.0000000       3 46987990 46988077 88 +      
ENSG00000160796 E013 34.3446055 0.0031132762 5.396696e-03 1.700550e-02 3 46988669 46988757 89 + 1.631 1.461 -0.582
ENSG00000160796 E014 50.7098599 0.0006788280 2.663722e-01 4.045584e-01 3 46988842 46988970 129 + 1.724 1.677 -0.159
ENSG00000160796 E015 47.7732201 0.0005990044 2.157043e-01 3.452388e-01 3 46989085 46989166 82 + 1.705 1.650 -0.186
ENSG00000160796 E016 58.6120022 0.0004716699 2.887488e-01 4.293767e-01 3 46989260 46989381 122 + 1.717 1.777 0.203
ENSG00000160796 E017 38.9317618 0.0008321501 2.184060e-01 3.484912e-01 3 46989511 46989593 83 + 1.623 1.562 -0.209
ENSG00000160796 E018 28.3701963 0.0007014814 3.891439e-07 3.516439e-06 3 46991219 46991304 86 + 1.619 1.298 -1.107
ENSG00000160796 E019 44.2551024 0.0004851513 1.292375e-08 1.560561e-07 3 46991406 46991688 283 + 1.792 1.501 -0.989
ENSG00000160796 E020 39.1876858 0.0042819986 6.050462e-07 5.266445e-06 3 46991840 46991946 107 + 1.748 1.441 -1.047
ENSG00000160796 E021 1.3244365 0.0884891624 8.828681e-03 2.585311e-02 3 46992475 46992555 81 + 0.603 0.107 -3.424
ENSG00000160796 E022 32.7313012 0.0327347351 3.260851e-04 1.485210e-03 3 46993937 46994020 84 + 1.695 1.339 -1.221
ENSG00000160796 E023 33.8023322 0.0096089231 1.199854e-04 6.138835e-04 3 46994455 46994553 99 + 1.675 1.395 -0.957
ENSG00000160796 E024 49.9933893 0.0043785204 2.512520e-06 1.912987e-05 3 46995032 46995320 289 + 1.835 1.570 -0.895
ENSG00000160796 E025 59.0281093 0.0004254565 1.394337e-10 2.402046e-09 3 46995321 46995633 313 + 1.911 1.625 -0.969
ENSG00000160796 E026 38.0398815 0.0035373290 1.502422e-05 9.588644e-05 3 46995714 46995846 133 + 1.714 1.453 -0.891
ENSG00000160796 E027 35.8807118 0.0006091576 5.485024e-04 2.341577e-03 3 46995932 46996051 120 + 1.661 1.469 -0.655
ENSG00000160796 E028 42.8539973 0.0005116163 8.492301e-05 4.513511e-04 3 46996271 46996392 122 + 1.739 1.538 -0.683
ENSG00000160796 E029 34.2626655 0.0005884192 2.348802e-02 5.875014e-02 3 46996393 46996478 86 + 1.603 1.477 -0.432
ENSG00000160796 E030 47.3891078 0.0005440546 2.093496e-05 1.292720e-04 3 46996479 46996592 114 + 1.779 1.569 -0.711
ENSG00000160796 E031 34.6467326 0.0160364068 1.920048e-01 3.162691e-01 3 46996751 46996828 78 + 1.587 1.494 -0.318
ENSG00000160796 E032 21.5910986 0.0133403570 2.957877e-01 4.369318e-01 3 46996829 46996833 5 + 1.386 1.301 -0.295
ENSG00000160796 E033 2.0097775 0.0167079488 1.401908e-02 3.826905e-02 3 46996834 46996953 120 + 0.678 0.266 -2.157
ENSG00000160796 E034 48.7090587 0.0080614829 1.529315e-02 4.115224e-02 3 46996954 46997046 93 + 1.765 1.617 -0.502
ENSG00000160796 E035 56.7415517 0.0005885381 4.129042e-04 1.823858e-03 3 46997259 46997433 175 + 1.832 1.674 -0.535
ENSG00000160796 E036 43.9276171 0.0068894161 8.073447e-01 8.776102e-01 3 46997561 46997694 134 + 1.635 1.632 -0.011
ENSG00000160796 E037 0.1515154 0.0428710872 3.643287e-01   3 46997695 46997696 2 + 0.139 0.000 -13.141
ENSG00000160796 E038 28.9613808 0.0139405827 9.445432e-01 9.691961e-01 3 46998067 46998111 45 + 1.443 1.463 0.071
ENSG00000160796 E039 46.1360409 0.0005104558 3.457073e-02 8.084384e-02 3 46998112 46998226 115 + 1.711 1.610 -0.344
ENSG00000160796 E040 46.2584152 0.0005142714 4.639954e-03 1.493087e-02 3 46998463 46998565 103 + 1.733 1.595 -0.469
ENSG00000160796 E041 46.3339902 0.0035604613 7.021358e-02 1.437126e-01 3 46998717 46998879 163 + 1.711 1.615 -0.326
ENSG00000160796 E042 21.6661052 0.0009402452 5.101713e-01 6.454075e-01 3 46998959 46999012 54 + 1.297 1.356 0.206
ENSG00000160796 E043 34.1877412 0.0006311420 6.726551e-01 7.785369e-01 3 46999013 46999117 105 + 1.533 1.516 -0.056
ENSG00000160796 E044 5.8442516 0.0031938700 1.234295e-03 4.757257e-03 3 46999270 46999314 45 + 1.017 0.613 -1.602
ENSG00000160796 E045 57.0081813 0.0105756876 1.589237e-02 4.249667e-02 3 46999315 46999474 160 + 1.830 1.680 -0.509
ENSG00000160796 E046 1.2296269 0.2542151472 4.910606e-02 1.075603e-01 3 46999590 46999629 40 + 0.562 0.108 -3.228
ENSG00000160796 E047 43.2863170 0.0060453521 1.478727e-01 2.587925e-01 3 46999630 46999715 86 + 1.678 1.594 -0.286
ENSG00000160796 E048 87.5958326 0.0048775453 5.547964e-02 1.188091e-01 3 46999889 47000195 307 + 1.976 1.894 -0.275
ENSG00000160796 E049 42.3863701 0.0018661226 2.100867e-02 5.360815e-02 3 47000196 47000246 51 + 1.692 1.569 -0.416
ENSG00000160796 E050 74.8448415 0.0112614342 4.415179e-02 9.866734e-02 3 47000247 47000404 158 + 1.933 1.813 -0.405
ENSG00000160796 E051 2.3678877 0.0061099405 1.746158e-01 2.941948e-01 3 47000950 47001000 51 + 0.642 0.429 -1.004
ENSG00000160796 E052 80.5069278 0.0037487401 9.591624e-03 2.776155e-02 3 47001001 47001179 179 + 1.961 1.845 -0.391
ENSG00000160796 E053 4.4942432 0.0034920373 5.395831e-02 1.161942e-01 3 47001180 47001278 99 + 0.869 0.612 -1.046
ENSG00000160796 E054 75.7471089 0.0004663461 8.158890e-02 1.620394e-01 3 47001279 47001438 160 + 1.903 1.840 -0.212
ENSG00000160796 E055 64.3778498 0.0004188342 4.752490e-01 6.139790e-01 3 47001689 47001826 138 + 1.810 1.787 -0.077
ENSG00000160796 E056 49.7399612 0.0009919389 1.415690e-01 2.501780e-01 3 47001920 47002032 113 + 1.730 1.663 -0.225
ENSG00000160796 E057 60.1805608 0.0004694055 6.182746e-01 7.359741e-01 3 47002033 47002235 203 + 1.779 1.765 -0.047
ENSG00000160796 E058 41.6943524 0.0005702833 2.180465e-01 3.480701e-01 3 47002236 47002288 53 + 1.650 1.591 -0.199
ENSG00000160796 E059 64.9015934 0.0027828361 6.037790e-01 7.244820e-01 3 47002371 47002520 150 + 1.810 1.795 -0.051
ENSG00000160796 E060 3.6287055 0.0115077556 6.345408e-01 7.489648e-01 3 47002521 47002534 14 + 0.678 0.613 -0.277
ENSG00000160796 E061 70.2123941 0.0004227780 4.428606e-01 5.844231e-01 3 47002645 47002802 158 + 1.851 1.827 -0.081
ENSG00000160796 E062 79.2529898 0.0025905135 3.224797e-01 4.657762e-01 3 47002957 47003081 125 + 1.911 1.875 -0.123
ENSG00000160796 E063 83.3666162 0.0019354190 2.370271e-01 3.707348e-01 3 47003174 47003309 136 + 1.936 1.894 -0.144
ENSG00000160796 E064 77.7871554 0.0003774005 8.281299e-01 8.919970e-01 3 47003816 47003926 111 + 1.867 1.885 0.062
ENSG00000160796 E065 51.3748806 0.0014204225 6.617679e-01 7.701708e-01 3 47003927 47003976 50 + 1.678 1.712 0.114
ENSG00000160796 E066 63.6606243 0.0009217245 6.662270e-02 1.377709e-01 3 47004077 47004171 95 + 1.727 1.824 0.330
ENSG00000160796 E067 54.1334332 0.0011970993 3.508543e-02 8.181117e-02 3 47004172 47004210 39 + 1.639 1.759 0.410
ENSG00000160796 E068 74.0371595 0.0003546258 2.983688e-01 4.398086e-01 3 47004211 47004393 183 + 1.876 1.842 -0.115
ENSG00000160796 E069 24.8096492 0.0025707078 5.775320e-08 6.138448e-07 3 47004394 47004494 101 + 1.587 1.203 -1.332
ENSG00000160796 E070 75.2693381 0.0004262559 3.760453e-01 5.204190e-01 3 47004495 47004590 96 + 1.878 1.851 -0.092
ENSG00000160796 E071 17.2993590 0.0029173342 9.926046e-04 3.932946e-03 3 47004591 47004618 28 + 1.386 1.118 -0.944
ENSG00000160796 E072 55.8617751 0.0039472668 1.789368e-11 3.571653e-10 3 47004619 47004971 353 + 1.921 1.558 -1.229
ENSG00000160796 E073 96.7629667 0.0008359151 7.701227e-01 8.515531e-01 3 47004972 47005096 125 + 1.975 1.973 -0.005
ENSG00000160796 E074 2.2959582 0.0063248104 3.064803e-05 1.819491e-04 3 47005144 47005180 37 + 0.797 0.108 -4.225
ENSG00000160796 E075 92.2655434 0.0052208495 9.544218e-01 9.754396e-01 3 47005181 47005280 100 + 1.950 1.959 0.030
ENSG00000160796 E076 61.0687239 0.0013951415 3.622639e-01 5.066536e-01 3 47005281 47005321 41 + 1.739 1.794 0.187
ENSG00000160796 E077 5.5368500 0.0029740043 2.932908e-01 4.343347e-01 3 47005322 47005488 167 + 0.869 0.741 -0.505
ENSG00000160796 E078 96.5406578 0.0003040458 8.387889e-01 8.992425e-01 3 47005489 47005619 131 + 1.959 1.976 0.057
ENSG00000160796 E079 1.2564918 0.0663351995 8.041680e-01 8.754178e-01 3 47005620 47005737 118 + 0.328 0.379 0.304
ENSG00000160796 E080 66.7802849 0.0004021934 7.764634e-02 1.556847e-01 3 47005738 47005786 49 + 1.853 1.785 -0.230
ENSG00000160796 E081 82.9185914 0.0006148562 9.179215e-01 9.521377e-01 3 47005787 47005847 61 + 1.895 1.909 0.047
ENSG00000160796 E082 3.0644755 0.0058104194 8.543667e-01 9.098933e-01 3 47005848 47005945 98 + 0.603 0.582 -0.095
ENSG00000160796 E083 114.1279459 0.0002969277 3.638416e-01 5.082642e-01 3 47005946 47006063 118 + 2.013 2.054 0.138
ENSG00000160796 E084 7.7878429 0.0033045781 3.705565e-03 1.231312e-02 3 47006064 47006164 101 + 1.089 0.763 -1.235
ENSG00000160796 E085 130.6002324 0.0003229331 2.070956e-01 3.350492e-01 3 47006165 47006262 98 + 2.064 2.115 0.171
ENSG00000160796 E086 12.0280584 0.0045719418 4.897539e-03 1.564522e-02 3 47006263 47006332 70 + 1.244 0.976 -0.969
ENSG00000160796 E087 140.6932907 0.0002760911 2.084831e-02 5.326711e-02 3 47006333 47006449 117 + 2.077 2.160 0.276
ENSG00000160796 E088 80.9941142 0.0036851840 7.924218e-12 1.676029e-10 3 47006450 47007050 601 + 2.064 1.742 -1.082
ENSG00000160796 E089 12.4640069 0.0091485508 1.348524e-02 3.704654e-02 3 47007051 47007065 15 + 1.254 1.012 -0.870
ENSG00000160796 E090 84.5191347 0.0004288393 1.253845e-05 8.145992e-05 3 47007066 47007116 51 + 1.787 1.977 0.640
ENSG00000160796 E091 81.8053711 0.0003619881 8.314936e-08 8.579269e-07 3 47007117 47007155 39 + 1.736 1.973 0.799
ENSG00000160796 E092 17.7269159 0.0011684430 7.788765e-02 1.560826e-01 3 47007156 47007240 85 + 1.329 1.195 -0.472
ENSG00000160796 E093 108.6890462 0.0018398472 7.871878e-09 9.891906e-08 3 47007241 47007322 82 + 1.844 2.099 0.857
ENSG00000160796 E094 94.1036441 0.0025137163 3.384914e-08 3.775237e-07 3 47007323 47007350 28 + 1.773 2.042 0.904
ENSG00000160796 E095 37.7461801 0.0007552644 4.181847e-04 1.844044e-03 3 47007351 47007524 174 + 1.681 1.489 -0.656
ENSG00000160796 E096 177.1955526 0.0073946072 3.516102e-07 3.206484e-06 3 47007525 47007697 173 + 2.045 2.322 0.928
ENSG00000160796 E097 7.9182139 0.0142026150 4.041761e-01 5.478792e-01 3 47007698 47007762 65 + 0.985 0.892 -0.349
ENSG00000160796 E098 6.0508358 0.0027632170 4.196981e-04 1.849771e-03 3 47007763 47007815 53 + 1.048 0.613 -1.713
ENSG00000160796 E099 143.7175994 0.0051499814 5.368622e-11 9.913433e-10 3 47007816 47007910 95 + 1.913 2.243 1.107
ENSG00000160796 E100 26.4518905 0.0008344014 2.564013e-01 3.933544e-01 3 47007911 47008069 159 + 1.460 1.392 -0.235
ENSG00000160796 E101 165.0951863 0.0015523995 1.691099e-09 2.401602e-08 3 47008070 47008186 117 + 2.051 2.274 0.746
ENSG00000160796 E102 6.9570226 0.0040278934 6.089755e-01 7.285532e-01 3 47008187 47008282 96 + 0.911 0.857 -0.205
ENSG00000160796 E103 211.8645892 0.0052185933 4.332113e-06 3.125903e-05 3 47008283 47008441 159 + 2.163 2.383 0.736
ENSG00000160796 E104 4.4746583 0.0038520293 6.976808e-01 7.977546e-01 3 47008442 47008519 78 + 0.678 0.741 0.260
ENSG00000160796 E105 187.9126621 0.0072513645 7.155767e-10 1.091672e-08 3 47008520 47008668 149 + 2.028 2.360 1.109
ENSG00000160796 E106 4.5456348 0.0036917442 8.222417e-01 8.879192e-01 3 47008669 47008988 320 + 0.742 0.718 -0.096
ENSG00000160796 E107 150.3201630 0.0010271772 1.152041e-28 1.722579e-26 3 47008989 47009124 136 + 1.862 2.277 1.389
ENSG00000160796 E108 0.7718438 0.0199603434 4.782115e-01 6.166499e-01 3 47009125 47009218 94 + 0.139 0.266 1.171
ENSG00000160796 E109 151.6784753 0.0002234861 2.255422e-30 3.898566e-28 3 47009219 47009704 486 + 1.884 2.271 1.297