ENSG00000160216

1 Isoform Switch

Summary Plot
Results

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Rows: 1-7 / 7
Columns:
Select all:
isoform_id
gene_id
condition_1
condition_2
gene_name
gene_biotype
iso_biotype
gene_overall_mean
gene_value_1
gene_value_2
gene_stderr_1
gene_stderr_2
gene_log2_fold_change
iso_overall_mean
iso_value_1
iso_value_2
iso_stderr_1
iso_stderr_2
iso_log2_fold_change
IF_overall
IF1
IF2
dIF
isoform_switch_q_value
gene_switch_q_value
PTC
codingPotential
Close
Columns▼Records:
Use the filters above each column to filter and limit table data. Advanced searches can be performed by using the following operators:
<, <=, >, >=, =, *, !, {, }, ||,&&, **[empty]**, **[nonempty]**, **rgx:**
Learn more
TableFilter v0.7.3
https://www.tablefilter.com/
©2015-2025 Max Guglielmi
Close
?
Page of 1
isoform_id	gene_id	condition_1	condition_2	gene_name	gene_biotype	iso_biotype	gene_overall_mean	gene_value_1	gene_value_2	gene_stderr_1	gene_stderr_2	gene_log2_fold_change	iso_overall_mean	iso_value_1	iso_value_2	iso_stderr_1	iso_stderr_2	iso_log2_fold_change	IF_overall	IF1	IF2	dIF	isoform_switch_q_value	gene_switch_q_value	PTC	codingPotential

ENST00000291572	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding	protein_coding	29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	11.1096260	13.402815	11.7549753	1.7138921	0.38191512	-0.18911379	0.37116667	0.43980000	0.37293333	-0.066866667	2.709085e-01	3.386319e-38	FALSE	TRUE
ENST00000398061	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding	protein_coding	29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	1.2173650	2.691325	0.3837715	0.6793844	0.38377152	-2.77823659	0.04412500	0.08770000	0.01286667	-0.074833333	7.771191e-02	3.386319e-38	FALSE	TRUE
ENST00000457068	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding	protein_coding	29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	4.0927013	0.000000	6.0323616	0.0000000	0.68870601	9.23896871	0.13959167	0.00000000	0.19043333	0.190433333	3.386319e-38	3.386319e-38	FALSE	FALSE
ENST00000479117	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding	processed_transcript	29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	0.7178081	1.464479	0.0000000	0.8553472	0.00000000	-7.20406170	0.02765833	0.05350000	0.00000000	-0.053500000	1.690342e-01	3.386319e-38	FALSE	TRUE
ENST00000484865	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding	retained_intron	29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	2.7192260	1.799015	3.4470309	0.2835980	0.08934206	0.93432950	0.09374583	0.05896667	0.10933333	0.050366667	1.212477e-03	3.386319e-38	FALSE	TRUE
MSTRG.21419.1	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding		29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	2.0728697	2.643858	2.7423515	0.7528183	0.21656474	0.05257338	0.06669167	0.08530000	0.08696667	0.001666667	9.591929e-01	3.386319e-38	FALSE	FALSE
MSTRG.21419.6	ENSG00000160216	HEK293_OSMI2_2hA	HEK293_TMG_2hB	AGPAT3	protein_coding		29.27601	30.25717	31.55692	2.327316	1.192575	0.06065969	1.6700301	3.983020	1.3398703	0.5441000	0.90520557	-1.56465951	0.05858333	0.13316667	0.04363333	-0.089533333	4.020785e-01	3.386319e-38	FALSE	TRUE

Note:
- The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

Rows: 1-10 / 47
Columns:
Select all:
groupID
featureID
exonBaseMean
dispersion
pvalue
padj
seqnames
start
end
width
strand
HEK293_TMG_2hB
HEK293_OSMI2_2hA
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
Close
Columns▼Records:
Use the filters above each column to filter and limit table data. Advanced searches can be performed by using the following operators:
<, <=, >, >=, =, *, !, {, }, ||,&&, **[empty]**, **[nonempty]**, **rgx:**
Learn more
TableFilter v0.7.3
https://www.tablefilter.com/
©2015-2025 Max Guglielmi
Close
?
Page of 5
groupID	featureID	exonBaseMean	dispersion	pvalue	padj	seqnames	start	end	width	strand	HEK293_TMG_2hB	HEK293_OSMI2_2hA	log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB

ENSG00000160216	E001	1.5479712	0.0090004037	1.574544e-02	4.216211e-02	21	43865191	43865206	16	+	0.581	0.205	-2.224
ENSG00000160216	E002	3.4020686	0.0044410325	2.182851e-05	1.341251e-04	21	43865207	43865222	16	+	0.886	0.280	-2.887
ENSG00000160216	E003	4.2846443	0.0036201406	2.500112e-06	1.904841e-05	21	43865223	43865229	7	+	0.975	0.343	-2.809
ENSG00000160216	E004	6.0821627	0.0026170528	3.889990e-09	5.169381e-08	21	43865230	43865236	7	+	1.124	0.399	-3.032
ENSG00000160216	E005	8.4687910	0.0076413494	3.238166e-12	7.309195e-11	21	43865237	43865239	3	+	1.269	0.448	-3.282
ENSG00000160216	E006	43.2148739	0.0023901263	6.319487e-07	5.479212e-06	21	43865240	43865345	106	+	1.750	1.534	-0.735
ENSG00000160216	E007	3.3494482	0.0178301910	9.453471e-01	9.696804e-01	21	43866457	43866618	162	+	0.620	0.663	0.185
ENSG00000160216	E008	2.7227625	0.0187039571	9.412473e-01	9.670668e-01	21	43866619	43866665	47	+	0.539	0.602	0.286
ENSG00000160216	E009	7.3555711	0.0368963558	1.852876e-01	3.078599e-01	21	43867139	43867241	103	+	0.975	0.850	-0.473
ENSG00000160216	E010	9.6292854	0.0314098013	4.689940e-01	6.083125e-01	21	43867242	43867346	105	+	1.021	0.995	-0.095
ENSG00000160216	E011	1.2136029	0.0108647759	4.606128e-01	6.006120e-01	21	43867493	43867594	102	+	0.231	0.399	1.098
ENSG00000160216	E012	0.5514428	0.0196561105	1.430031e-01	2.521243e-01	21	43867677	43867746	70	+	0.000	0.280	14.987
ENSG00000160216	E013	2.8558175	0.0401577269	2.187036e-01	3.488603e-01	21	43882504	43882543	40	+	0.655	0.494	-0.731
ENSG00000160216	E014	4.3512460	0.0041411888	2.412745e-01	3.756809e-01	21	43882544	43882615	72	+	0.773	0.664	-0.446
ENSG00000160216	E015	0.4439371	0.0215538894	4.581546e-02	1.016918e-01	21	43903891	43903956	66	+	0.313	0.000	-15.812
ENSG00000160216	E016	59.9598757	0.0027423554	1.861764e-03	6.794690e-03	21	43903957	43904019	63	+	1.825	1.734	-0.307
ENSG00000160216	E017	0.0000000				21	43916272	43916421	150	+
ENSG00000160216	E018	1.2899771	0.0321894129	9.760391e-01	9.890333e-01	21	43924209	43924332	124	+	0.313	0.345	0.201
ENSG00000160216	E019	0.1482932	0.0420749073	6.451377e-01		21	43925008	43925451	444	+	0.000	0.114	13.115
ENSG00000160216	E020	0.1482932	0.0420749073	6.451377e-01		21	43946930	43946949	20	+	0.000	0.114	13.115
ENSG00000160216	E021	0.1482932	0.0420749073	6.451377e-01		21	43946950	43947005	56	+	0.000	0.114	13.115
ENSG00000160216	E022	0.0000000				21	43947006	43947009	4	+
ENSG00000160216	E023	0.0000000				21	43947010	43947058	49	+
ENSG00000160216	E024	0.0000000				21	43948154	43948273	120	+
ENSG00000160216	E025	0.0000000				21	43948274	43948329	56	+
ENSG00000160216	E026	0.0000000				21	43948330	43948342	13	+
ENSG00000160216	E027	0.0000000				21	43950687	43950712	26	+
ENSG00000160216	E028	0.1482932	0.0420749073	6.451377e-01		21	43950713	43950874	162	+	0.000	0.114	13.115
ENSG00000160216	E029	0.2214452	0.0387560350	6.434299e-01		21	43954548	43954549	2	+	0.000	0.115	13.154
ENSG00000160216	E030	3.1698056	0.0080172978	6.425958e-01	7.553662e-01	21	43954550	43955242	693	+	0.539	0.664	0.553
ENSG00000160216	E031	135.5978668	0.0013222162	4.346312e-02	9.740182e-02	21	43959634	43959747	114	+	2.124	2.123	-0.001
ENSG00000160216	E032	118.0541525	0.0035171455	5.114872e-01	6.465110e-01	21	43959748	43959782	35	+	2.037	2.081	0.147
ENSG00000160216	E033	97.6185938	0.0003502377	6.063526e-02	1.277019e-01	21	43959783	43959788	6	+	1.981	1.981	0.000
ENSG00000160216	E034	175.5373756	0.0026671141	2.404464e-02	5.990748e-02	21	43959789	43959859	71	+	2.241	2.231	-0.033
ENSG00000160216	E035	39.2878623	0.0005988668	4.734992e-02	1.044528e-01	21	43960632	43960779	148	+	1.618	1.573	-0.150
ENSG00000160216	E036	69.4707853	0.0003876910	1.324669e-05	8.553614e-05	21	43964929	43967868	2940	+	1.900	1.783	-0.395
ENSG00000160216	E037	7.5975553	0.0021685034	5.471476e-02	1.174979e-01	21	43967869	43967945	77	+	1.006	0.847	-0.602
ENSG00000160216	E038	314.8236285	0.0008866858	3.293515e-04	1.498323e-03	21	43967946	43968115	170	+	2.498	2.482	-0.052
ENSG00000160216	E039	302.3903382	0.0015244495	6.070248e-02	1.278165e-01	21	43969118	43969279	162	+	2.460	2.481	0.068
ENSG00000160216	E040	290.4458929	0.0016675704	3.451594e-01	4.892388e-01	21	43970653	43970806	154	+	2.430	2.474	0.148
ENSG00000160216	E041	6.9440806	0.0024244000	9.862867e-04	3.911952e-03	21	43970807	43970880	74	+	0.539	1.039	2.013
ENSG00000160216	E042	123.3733842	0.0037711475	5.562133e-02	1.190466e-01	21	43971388	43971402	15	+	2.094	2.082	-0.040
ENSG00000160216	E043	214.6712038	0.0001902340	1.413420e-05	9.066746e-05	21	43971403	43971490	88	+	2.346	2.309	-0.124
ENSG00000160216	E044	184.6414533	0.0002059398	5.676730e-03	1.775795e-02	21	43978046	43978121	76	+	2.262	2.258	-0.014
ENSG00000160216	E045	319.4874854	0.0004833503	3.465693e-05	2.028627e-04	21	43980989	43981187	199	+	2.508	2.487	-0.068
ENSG00000160216	E046	17.2789563	0.0014012872	4.867343e-03	1.556083e-02	21	43981188	43981412	225	+	1.338	1.172	-0.583
ENSG00000160216	E047	3222.0441859	0.0030493900	4.018575e-08	4.418497e-07	21	43982304	43987592	5289	+	3.410	3.556	0.487

Isoforom Switch Analysis

WANG Ziyi

Date: 19 5月 2022

ENSG00000160216

1 Isoform Switch

TableFilter v0.7.3

2 Differential Exon Usage

TableFilter v0.7.3