ENSG00000154175

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000284322 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.04282276 0.01118847 0.01949413 0.01118847 0.01949413 0.4771483 0.09800417 0.0468000 0.05376667 0.006966667 0.8825127295 0.0005258564 FALSE TRUE
ENST00000466947 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.02879838 0.00000000 0.06927572 0.00000000 0.06927572 2.9868790 0.03710417 0.0000000 0.08000000 0.080000000 0.9717141565 0.0005258564 FALSE FALSE
ENST00000470336 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding retained_intron 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.04991740 0.09928032 0.00000000 0.02562446 0.00000000 -3.4499618 0.14951250 0.4503000 0.00000000 -0.450300000 0.0005258564 0.0005258564 FALSE TRUE
ENST00000471714 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.05356205 0.03821237 0.12710589 0.01523209 0.03967489 1.5078153 0.17681667 0.1495000 0.21860000 0.069100000 0.8493386699 0.0005258564 FALSE TRUE
ENST00000471901 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.01916746 0.00000000 0.06332050 0.00000000 0.06332050 2.8742166 0.02006667 0.0000000 0.07310000 0.073100000 0.9744748738 0.0005258564 FALSE FALSE
ENST00000478235 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.02329299 0.03677956 0.11238901 0.03677956 0.05785646 1.3875238 0.05280417 0.1538000 0.19263333 0.038833333 0.9079079992 0.0005258564 FALSE FALSE
ENST00000482765 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.05399665 0.00000000 0.13455151 0.00000000 0.13455151 3.8535117 0.08891250 0.0000000 0.12493333 0.124933333 0.9512567227 0.0005258564 FALSE FALSE
ENST00000497395 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.01324352 0.00000000 0.06760878 0.00000000 0.06760878 2.9562199 0.01542083 0.0000000 0.06276667 0.062766667 0.9511794424 0.0005258564 FALSE FALSE
ENST00000527258 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding protein_coding 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.04975043 0.00000000 0.09366657 0.00000000 0.09366657 3.3738788 0.06314583 0.0000000 0.10816667 0.108166667 0.9701929946 0.0005258564 FALSE FALSE
ENST00000532144 ENSG00000154175 HEK293_OSMI2_2hA HEK293_TMG_2hB ABI3BP protein_coding processed_transcript 0.5133925 0.2366961 0.7685335 0.02973769 0.2118971 1.658024 0.01290410 0.03413327 0.00000000 0.03413327 0.00000000 -2.1418667 0.02992917 0.1189667 0.00000000 -0.118966667 0.4494090232 0.0005258564   FALSE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000154175 E001 0.1817044 0.040871347 2.056080e-01   3 100749156 100749334 179 - 0.000 0.168 10.485
ENSG00000154175 E002 3.6502718 0.004985257 1.026158e-05 6.803718e-05 3 100749335 100750239 905 - 0.326 0.933 2.761
ENSG00000154175 E003 0.6642364 0.023157702 4.035941e-01 5.473644e-01 3 100750240 100750283 44 - 0.161 0.289 1.083
ENSG00000154175 E004 1.2533463 0.011114699 7.599063e-01 8.441537e-01 3 100750284 100750455 172 - 0.369 0.289 -0.502
ENSG00000154175 E005 1.6522545 0.008969775 4.965424e-02 1.085467e-01 3 100750456 100750610 155 - 0.277 0.585 1.668
ENSG00000154175 E006 1.4308093 0.016296454 1.146472e-01 2.123208e-01 3 100751552 100751674 123 - 0.277 0.527 1.403
ENSG00000154175 E007 0.0000000       3 100752507 100752786 280 -      
ENSG00000154175 E008 1.2480608 0.012198908 6.464356e-01 7.583420e-01 3 100752787 100752948 162 - 0.326 0.384 0.345
ENSG00000154175 E009 0.6192988 0.026367849 8.390879e-01 8.994358e-01 3 100753819 100753848 30 - 0.223 0.168 -0.501
ENSG00000154175 E010 0.7708142 0.016146377 6.212683e-01 7.382522e-01 3 100754612 100754691 80 - 0.277 0.168 -0.917
ENSG00000154175 E011 0.6256415 0.018000201 8.390263e-01 8.994003e-01 3 100765841 100765906 66 - 0.223 0.168 -0.502
ENSG00000154175 E012 0.2966881 0.028206477 5.451918e-01   3 100765907 100765949 43 - 0.161 0.000 -13.554
ENSG00000154175 E013 1.4080959 0.097024507 8.497682e-01 9.067746e-01 3 100770743 100770952 210 - 0.370 0.383 0.076
ENSG00000154175 E014 0.0000000       3 100774604 100774604 1 -      
ENSG00000154175 E015 1.4059059 0.010068567 8.248906e-01 8.896640e-01 3 100774605 100774673 69 - 0.370 0.384 0.082
ENSG00000154175 E016 1.5928070 0.011355523 1.857946e-01 3.085021e-01 3 100775207 100775290 84 - 0.326 0.527 1.081
ENSG00000154175 E017 1.7412020 0.008515571 6.446811e-01 7.569299e-01 3 100775291 100775335 45 - 0.409 0.461 0.275
ENSG00000154175 E018 2.0420547 0.019861950 2.294321e-01 3.617549e-01 3 100778284 100778376 93 - 0.409 0.584 0.856
ENSG00000154175 E019 0.0000000       3 100778377 100778627 251 -      
ENSG00000154175 E020 0.0000000       3 100780131 100780131 1 -      
ENSG00000154175 E021 1.5499457 0.010015311 4.966968e-01 6.333253e-01 3 100780132 100780209 78 - 0.370 0.461 0.497
ENSG00000154175 E022 1.2909221 0.010447456 2.362882e-01 3.698655e-01 3 100787728 100787802 75 - 0.277 0.461 1.082
ENSG00000154175 E023 0.9931898 0.015908886 3.047586e-01 4.467864e-01 3 100789454 100789516 63 - 0.223 0.384 1.084
ENSG00000154175 E024 0.6611159 0.019374314 8.399934e-01 9.000805e-01 3 100792691 100792768 78 - 0.223 0.169 -0.500
ENSG00000154175 E025 1.5961310 0.009915704 4.807213e-01 6.189468e-01 3 100794923 100795003 81 - 0.445 0.290 -0.916
ENSG00000154175 E026 0.0000000       3 100795804 100795851 48 -      
ENSG00000154175 E027 0.2987644 0.029078516 5.476262e-01   3 100796409 100796468 60 - 0.161 0.000 -13.554
ENSG00000154175 E028 1.4552247 0.015732481 6.122494e-01 7.312231e-01 3 100804792 100804844 53 - 0.409 0.290 -0.723
ENSG00000154175 E029 1.0706083 0.014287500 3.051792e-01 4.472203e-01 3 100804845 100804866 22 - 0.223 0.385 1.086
ENSG00000154175 E030 1.0706083 0.014287500 3.051792e-01 4.472203e-01 3 100808161 100808192 32 - 0.223 0.385 1.086
ENSG00000154175 E031 0.6674587 0.018714916 8.408089e-01 9.006334e-01 3 100808193 100808235 43 - 0.223 0.169 -0.500
ENSG00000154175 E032 0.4460135 0.023779889 3.147523e-01 4.574907e-01 3 100810412 100810477 66 - 0.223 0.000 -13.990
ENSG00000154175 E033 0.2987644 0.029078516 5.476262e-01   3 100811230 100811277 48 - 0.161 0.000 -13.554
ENSG00000154175 E034 0.5202097 0.020341089 8.935404e-01 9.359179e-01 3 100811728 100811799 72 - 0.161 0.169 0.085
ENSG00000154175 E035 0.3686942 0.027531624 5.319994e-01 6.643794e-01 3 100812467 100812523 57 - 0.088 0.169 1.086
ENSG00000154175 E036 0.0000000       3 100812524 100812524 1 -      
ENSG00000154175 E037 0.2924217 0.027868343 5.463998e-01   3 100813661 100813735 75 - 0.160 0.000 -13.554
ENSG00000154175 E038 0.1451727 0.045032264 1.000000e+00   3 100815912 100815971 60 - 0.088 0.000 -12.791
ENSG00000154175 E039 0.2998086 0.030362988 5.335858e-01   3 100816011 100816687 677 - 0.088 0.168 1.080
ENSG00000154175 E040 0.2955422 0.029506504 5.325188e-01   3 100816688 100816768 81 - 0.088 0.168 1.080
ENSG00000154175 E041 0.2955422 0.029506504 5.325188e-01   3 100817436 100817495 60 - 0.088 0.168 1.080
ENSG00000154175 E042 0.2934659 0.030675926 5.345748e-01   3 100818525 100818581 57 - 0.088 0.168 1.081
ENSG00000154175 E043 0.6235652 0.021118604 8.374934e-01 8.984118e-01 3 100820220 100820303 84 - 0.223 0.168 -0.502
ENSG00000154175 E044 0.9159869 0.021348647 4.603429e-01 6.003884e-01 3 100821054 100821113 60 - 0.326 0.168 -1.238
ENSG00000154175 E045 1.0642801 0.014714657 9.378882e-01 9.649814e-01 3 100822589 100822672 84 - 0.326 0.289 -0.240
ENSG00000154175 E046 0.5901540 0.021609846 8.365764e-01 8.978074e-01 3 100823458 100823514 57 - 0.223 0.168 -0.504
ENSG00000154175 E047 1.2242146 0.011359917 7.605396e-01 8.446146e-01 3 100824858 100824941 84 - 0.370 0.289 -0.503
ENSG00000154175 E048 0.7739347 0.015313423 6.325609e-01 7.473916e-01 3 100825785 100825844 60 - 0.223 0.289 0.497
ENSG00000154175 E049 1.0769655 0.013250278 9.396437e-01 9.660863e-01 3 100828393 100828452 60 - 0.326 0.289 -0.240
ENSG00000154175 E050 0.7814233 0.020508101 6.227141e-01 7.394466e-01 3 100829581 100829664 84 - 0.278 0.168 -0.917
ENSG00000154175 E051 0.5244761 0.179727737 8.855615e-01 9.308028e-01 3 100830578 100830634 57 - 0.161 0.170 0.097
ENSG00000154175 E052 0.9578041 0.013696863 4.587793e-01 5.990624e-01 3 100832264 100832305 42 - 0.326 0.169 -1.237
ENSG00000154175 E053 0.4396707 0.025065759 3.144387e-01 4.571571e-01 3 100832306 100832314 9 - 0.223 0.000 -13.990
ENSG00000154175 E054 0.4396707 0.025065759 3.144387e-01 4.571571e-01 3 100832315 100832350 36 - 0.223 0.000 -13.990
ENSG00000154175 E055 0.5138669 0.020795459 8.945368e-01 9.366146e-01 3 100833125 100833157 33 - 0.161 0.169 0.085
ENSG00000154175 E056 0.5138669 0.020795459 8.945368e-01 9.366146e-01 3 100834684 100834773 90 - 0.161 0.169 0.085
ENSG00000154175 E057 0.0000000       3 100835601 100835660 60 -      
ENSG00000154175 E058 0.1515154 0.043082303 1.000000e+00   3 100837124 100837171 48 - 0.088 0.000 -12.792
ENSG00000154175 E059 0.0000000       3 100837172 100837193 22 -      
ENSG00000154175 E060 0.0000000       3 100837194 100837323 130 -      
ENSG00000154175 E061 0.4439371 0.021888284 3.126723e-01 4.552063e-01 3 100838210 100838284 75 - 0.223 0.000 -13.990
ENSG00000154175 E062 0.2924217 0.027868343 5.463998e-01   3 100838402 100838406 5 - 0.160 0.000 -13.554
ENSG00000154175 E063 0.4439371 0.021888284 3.126723e-01 4.552063e-01 3 100838407 100838464 58 - 0.223 0.000 -13.990
ENSG00000154175 E064 0.2966881 0.028206477 5.451918e-01   3 100839569 100839616 48 - 0.161 0.000 -13.554
ENSG00000154175 E065 0.1472490 0.042866449 1.000000e+00   3 100840072 100840162 91 - 0.088 0.000 -12.791
ENSG00000154175 E066 0.0000000       3 100840163 100840164 2 -      
ENSG00000154175 E067 0.0000000       3 100840820 100840858 39 -      
ENSG00000154175 E068 0.3686942 0.027531624 5.319994e-01 6.643794e-01 3 100841998 100842039 42 - 0.088 0.169 1.086
ENSG00000154175 E069 0.6674587 0.018714916 8.408089e-01 9.006334e-01 3 100846372 100846428 57 - 0.223 0.169 -0.500
ENSG00000154175 E070 0.5202097 0.020341089 8.935404e-01 9.359179e-01 3 100846429 100846430 2 - 0.161 0.169 0.085
ENSG00000154175 E071 0.3729606 0.027509262 5.328690e-01 6.651672e-01 3 100846431 100846446 16 - 0.088 0.169 1.085
ENSG00000154175 E072 0.0000000       3 100846447 100846549 103 -      
ENSG00000154175 E073 0.5181333 0.022202705 8.958205e-01 9.374301e-01 3 100847602 100847673 72 - 0.161 0.169 0.085
ENSG00000154175 E074 0.5181333 0.022202705 8.958205e-01 9.374301e-01 3 100848801 100848875 75 - 0.161 0.169 0.085
ENSG00000154175 E075 0.3030308 0.330310551 6.415714e-01   3 100850045 100850119 75 - 0.161 0.000 -13.531
ENSG00000154175 E076 0.8889039 0.048413748 6.380190e-01 7.517681e-01 3 100850660 100850734 75 - 0.223 0.291 0.507
ENSG00000154175 E077 1.3306510 0.389709227 9.132226e-01 9.490193e-01 3 100851875 100851940 66 - 0.370 0.299 -0.435
ENSG00000154175 E078 1.5812555 0.011171657 4.826501e-01 6.207804e-01 3 100862311 100862385 75 - 0.445 0.290 -0.916
ENSG00000154175 E079 0.0000000       3 100862418 100862837 420 -      
ENSG00000154175 E080 0.8126314 0.015149707 6.220380e-01 7.389032e-01 3 100862838 100862863 26 - 0.277 0.169 -0.916
ENSG00000154175 E081 0.9943357 0.013081171 8.546452e-01 9.100872e-01 3 100862864 100862909 46 - 0.277 0.290 0.085
ENSG00000154175 E082 0.0000000       3 100862910 100864001 1092 -      
ENSG00000154175 E083 1.2116283 0.152895909 5.254939e-01 6.588483e-01 3 100864002 100864076 75 - 0.277 0.389 0.701
ENSG00000154175 E084 0.2934659 0.030675926 5.345748e-01   3 100864077 100864832 756 - 0.088 0.168 1.081
ENSG00000154175 E085 0.2214452 0.037280799 2.055562e-01   3 100864833 100864907 75 - 0.000 0.169 13.841
ENSG00000154175 E086 0.1451727 0.045032264 1.000000e+00   3 100866879 100866920 42 - 0.088 0.000 -12.791
ENSG00000154175 E087 0.1451727 0.045032264 1.000000e+00   3 100866921 100866956 36 - 0.088 0.000 -12.791
ENSG00000154175 E088 0.9223296 0.014033131 4.587188e-01 5.990164e-01 3 100874841 100874933 93 - 0.326 0.168 -1.239
ENSG00000154175 E089 1.0738451 0.013192425 3.372993e-01 4.811700e-01 3 100875508 100875529 22 - 0.370 0.168 -1.502
ENSG00000154175 E090 1.3662668 0.009676551 1.791980e-01 3.001372e-01 3 100875530 100875579 50 - 0.445 0.168 -1.917
ENSG00000154175 E091 1.3640767 0.010332067 1.804190e-01 3.017128e-01 3 100876512 100876560 49 - 0.445 0.168 -1.917
ENSG00000154175 E092 1.6628412 0.009051416 9.503815e-02 1.829299e-01 3 100885536 100885578 43 - 0.510 0.168 -2.239
ENSG00000154175 E093 1.3296214 0.010794866 2.206712e-02 5.582031e-02 3 100885579 100885588 10 - 0.479 0.000 -15.261
ENSG00000154175 E094 2.7679062 0.005636886 4.625624e-01 6.024243e-01 3 100886142 100886323 182 - 0.616 0.462 -0.725
ENSG00000154175 E095 1.9197728 0.008133366 7.977613e-01 8.709759e-01 3 100898762 100898803 42 - 0.445 0.462 0.083
ENSG00000154175 E096 1.5404694 0.121352255 9.863207e-01 9.954807e-01 3 100898804 100898836 33 - 0.408 0.383 -0.143
ENSG00000154175 E097 1.6972954 0.075034737 6.967244e-01 7.970006e-01 3 100898837 100898894 58 - 0.409 0.460 0.266
ENSG00000154175 E098 1.4843710 0.009455704 1.299728e-01 2.341310e-01 3 100902618 100902686 69 - 0.479 0.168 -2.088
ENSG00000154175 E099 0.0000000       3 100914428 100914464 37 -      
ENSG00000154175 E100 2.9257644 0.005412475 3.819450e-01 5.262041e-01 3 100926302 100926481 180 - 0.639 0.462 -0.824
ENSG00000154175 E101 0.0000000       3 100930716 100930994 279 -      
ENSG00000154175 E102 0.0000000       3 100945580 100945676 97 -      
ENSG00000154175 E103 1.6734503 0.010432815 9.569608e-02 1.839310e-01 3 100993306 100993421 116 - 0.510 0.168 -2.239
ENSG00000154175 E104 0.6299079 0.020659743 8.385141e-01 8.990445e-01 3 100993422 100993450 29 - 0.223 0.168 -0.502
ENSG00000154175 E105 0.6299079 0.020659743 8.385141e-01 8.990445e-01 3 100993451 100993453 3 - 0.223 0.168 -0.502
ENSG00000154175 E106 0.4783925 0.023108802 8.947580e-01 9.367426e-01 3 100993454 100993460 7 - 0.161 0.168 0.083
ENSG00000154175 E107 0.1451727 0.045032264 1.000000e+00   3 100993461 100993492 32 - 0.088 0.000 -12.791
ENSG00000154175 E108 0.0000000       3 100993493 100993515 23 -