ENSG00000152767

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000319562 ENSG00000152767 HEK293_OSMI2_2hA HEK293_TMG_2hB FARP1 protein_coding protein_coding 26.96964 38.21353 23.96951 4.829762 1.272207 -0.6726585 4.1524714 6.698626 2.8168660 0.3634046 0.05895748 -1.2468137 0.14847500 0.1784000 0.11850000 -0.05990000 3.944649e-02 1.437145e-18 FALSE  
ENST00000457029 ENSG00000152767 HEK293_OSMI2_2hA HEK293_TMG_2hB FARP1 protein_coding processed_transcript 26.96964 38.21353 23.96951 4.829762 1.272207 -0.6726585 5.0816803 6.700221 4.5754075 1.7040507 1.04414489 -0.5493104 0.19218333 0.1698000 0.18880000 0.01900000 9.082693e-01 1.437145e-18    
ENST00000596256 ENSG00000152767 HEK293_OSMI2_2hA HEK293_TMG_2hB FARP1 protein_coding protein_coding 26.96964 38.21353 23.96951 4.829762 1.272207 -0.6726585 5.1287050 8.409198 3.9929981 0.8018381 0.33722680 -1.0726019 0.18157500 0.2270667 0.16600000 -0.06106667 4.128657e-01 1.437145e-18 FALSE  
ENST00000598389 ENSG00000152767 HEK293_OSMI2_2hA HEK293_TMG_2hB FARP1 protein_coding protein_coding 26.96964 38.21353 23.96951 4.829762 1.272207 -0.6726585 0.8265452 0.000000 1.7812122 0.0000000 0.36774465 7.4847925 0.03795417 0.0000000 0.07306667 0.07306667 1.437145e-18 1.437145e-18 FALSE  
ENST00000599040 ENSG00000152767 HEK293_OSMI2_2hA HEK293_TMG_2hB FARP1 protein_coding processed_transcript 26.96964 38.21353 23.96951 4.829762 1.272207 -0.6726585 6.6687996 7.960510 6.6723357 2.1770447 0.81761183 -0.2543195 0.25878333 0.2014000 0.28180000 0.08040000 4.587952e-01 1.437145e-18    
ENST00000600380 ENSG00000152767 HEK293_OSMI2_2hA HEK293_TMG_2hB FARP1 protein_coding processed_transcript 26.96964 38.21353 23.96951 4.829762 1.272207 -0.6726585 1.8881080 4.812829 0.7504597 0.5636148 0.40898210 -2.6649360 0.05965833 0.1309000 0.02966667 -0.10123333 2.672710e-01 1.437145e-18    
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000152767 E001 0.0000000       13 98142562 98142777 216 +      
ENSG00000152767 E002 0.1451727 0.0431714889 2.107368e-01   13 98143094 98143097 4 + 0.173 0.000 -10.895
ENSG00000152767 E003 0.6235652 0.0235245968 6.906936e-02 1.418334e-01 13 98143098 98143179 82 + 0.392 0.085 -2.758
ENSG00000152767 E004 2.7208010 0.0105636090 5.708820e-02 1.216174e-01 13 98143180 98143313 134 + 0.732 0.437 -1.344
ENSG00000152767 E005 6.1928125 0.0090889502 1.893354e-06 1.480967e-05 13 98143314 98143365 52 + 1.152 0.557 -2.342
ENSG00000152767 E006 12.6091111 0.0130951138 2.931474e-04 1.351830e-03 13 98143366 98143415 50 + 1.313 0.937 -1.353
ENSG00000152767 E007 21.6987815 0.0084556407 1.375430e-04 6.927688e-04 13 98143416 98143479 64 + 1.502 1.188 -1.095
ENSG00000152767 E008 17.3150718 0.0010695505 7.903334e-06 5.374624e-05 13 98143480 98143492 13 + 1.438 1.081 -1.255
ENSG00000152767 E009 0.3268771 0.0289905535 5.402798e-01   13 98159492 98159598 107 + 0.173 0.085 -1.173
ENSG00000152767 E010 0.0000000       13 98177817 98177929 113 +      
ENSG00000152767 E011 82.9454631 0.0008081204 1.924975e-10 3.234705e-09 13 98213220 98213413 194 + 2.039 1.789 -0.843
ENSG00000152767 E012 9.6673396 0.0144187197 5.539423e-01 6.830029e-01 13 98244491 98245304 814 + 1.032 0.973 -0.219
ENSG00000152767 E013 0.0000000       13 98328191 98328227 37 +      
ENSG00000152767 E014 0.0000000       13 98328228 98328324 97 +      
ENSG00000152767 E015 0.0000000       13 98328325 98328490 166 +      
ENSG00000152767 E016 0.0000000       13 98328536 98328717 182 +      
ENSG00000152767 E017 0.0000000       13 98328718 98328777 60 +      
ENSG00000152767 E018 0.0000000       13 98328778 98328779 2 +      
ENSG00000152767 E019 0.0000000       13 98328780 98328782 3 +      
ENSG00000152767 E020 0.0000000       13 98328783 98328784 2 +      
ENSG00000152767 E021 0.0000000       13 98328785 98328807 23 +      
ENSG00000152767 E022 0.0000000       13 98328808 98328879 72 +      
ENSG00000152767 E023 0.0000000       13 98328880 98328948 69 +      
ENSG00000152767 E024 0.0000000       13 98328949 98329071 123 +      
ENSG00000152767 E025 0.0000000       13 98329072 98329159 88 +      
ENSG00000152767 E026 0.0000000       13 98329331 98329754 424 +      
ENSG00000152767 E027 0.0000000       13 98329791 98329893 103 +      
ENSG00000152767 E028 0.0000000       13 98329894 98329939 46 +      
ENSG00000152767 E029 0.0000000       13 98329940 98329984 45 +      
ENSG00000152767 E030 0.0000000       13 98331758 98331784 27 +      
ENSG00000152767 E031 0.0000000       13 98332361 98332663 303 +      
ENSG00000152767 E032 0.0000000       13 98332771 98332992 222 +      
ENSG00000152767 E033 0.0000000       13 98332993 98333238 246 +      
ENSG00000152767 E034 0.0000000       13 98333599 98334349 751 +      
ENSG00000152767 E035 0.0000000       13 98338506 98338743 238 +      
ENSG00000152767 E036 0.0000000       13 98338744 98338879 136 +      
ENSG00000152767 E037 0.1451727 0.0431714889 2.107368e-01   13 98340689 98341015 327 + 0.173 0.000 -13.553
ENSG00000152767 E038 77.1083137 0.0004437416 6.327790e-06 4.402266e-05 13 98343762 98343866 105 + 1.963 1.784 -0.604
ENSG00000152767 E039 0.0000000       13 98345484 98345610 127 +      
ENSG00000152767 E040 65.0009831 0.0050410770 5.111391e-04 2.201368e-03 13 98365395 98365437 43 + 1.893 1.712 -0.612
ENSG00000152767 E041 91.4444473 0.0030814013 1.790604e-04 8.738849e-04 13 98368117 98368195 79 + 2.024 1.863 -0.540
ENSG00000152767 E042 103.3750403 0.0004191711 2.508588e-04 1.178886e-03 13 98377821 98377918 98 + 2.053 1.928 -0.419
ENSG00000152767 E043 0.2924217 0.0271771146 5.587061e-02   13 98381555 98381687 133 + 0.296 0.000 -14.777
ENSG00000152767 E044 0.2987644 0.0270973803 5.583717e-02   13 98382280 98382540 261 + 0.296 0.000 -14.779
ENSG00000152767 E045 0.2966881 0.0271828486 5.582666e-02   13 98383606 98384154 549 + 0.296 0.000 -14.777
ENSG00000152767 E046 0.0000000       13 98384361 98384729 369 +      
ENSG00000152767 E047 117.6428933 0.0015774221 5.396449e-04 2.308601e-03 13 98384730 98384844 115 + 2.106 1.984 -0.409
ENSG00000152767 E048 130.9460813 0.0040130151 1.131064e-01 2.100670e-01 13 98385667 98385814 148 + 2.107 2.051 -0.187
ENSG00000152767 E049 0.2998086 0.0295091640 5.396248e-01   13 98385815 98385995 181 + 0.173 0.085 -1.176
ENSG00000152767 E050 93.0455871 0.0003259744 2.033012e-01 3.303363e-01 13 98388383 98388478 96 + 1.947 1.907 -0.133
ENSG00000152767 E051 0.0000000       13 98389434 98389483 50 +      
ENSG00000152767 E052 0.5451131 0.5813840362 5.715615e-01 6.978260e-01 13 98389484 98389693 210 + 0.000 0.220 11.545
ENSG00000152767 E053 149.4100479 0.0008896877 6.278941e-05 3.451004e-04 13 98389957 98390120 164 + 2.208 2.087 -0.404
ENSG00000152767 E054 0.5514428 0.0197256607 3.078840e-01 4.501149e-01 13 98390585 98390811 227 + 0.000 0.218 12.974
ENSG00000152767 E055 110.5656009 0.0007697837 5.703137e-03 1.782496e-02 13 98390812 98390880 69 + 2.056 1.964 -0.312
ENSG00000152767 E056 102.3976944 0.0005103123 1.603202e-05 1.016472e-04 13 98393643 98393718 76 + 2.064 1.913 -0.505
ENSG00000152767 E057 164.5283066 0.0018462450 3.416214e-02 8.007416e-02 13 98395227 98395476 250 + 2.210 2.148 -0.209
ENSG00000152767 E058 46.7009394 0.0008118499 1.239165e-29 2.016805e-27 13 98395477 98404070 8594 + 1.963 1.391 -1.945
ENSG00000152767 E059 2.5947452 0.0233821226 1.199910e-02 3.352841e-02 13 98404071 98404122 52 + 0.770 0.362 -1.909
ENSG00000152767 E060 39.3824227 0.0006888085 9.069176e-03 2.645227e-02 13 98404123 98407494 3372 + 1.658 1.516 -0.482
ENSG00000152767 E061 144.7394904 0.0003888148 5.946741e-02 1.257161e-01 13 98409338 98409525 188 + 2.147 2.098 -0.166
ENSG00000152767 E062 110.6434825 0.0031987247 7.020952e-01 8.009826e-01 13 98410734 98410823 90 + 1.997 1.992 -0.017
ENSG00000152767 E063 128.4918896 0.0064955998 7.875689e-01 8.639257e-01 13 98411901 98412034 134 + 2.037 2.065 0.092
ENSG00000152767 E064 90.8702792 0.0043329342 7.565895e-01 8.416486e-01 13 98424572 98424650 79 + 1.888 1.917 0.099
ENSG00000152767 E065 3.1152274 0.0493437599 7.682352e-01 8.502650e-01 13 98425440 98425498 59 + 0.537 0.603 0.302
ENSG00000152767 E066 75.4397163 0.0023707443 3.772248e-01 5.215661e-01 13 98431043 98431080 38 + 1.786 1.843 0.192
ENSG00000152767 E067 101.6971437 0.0004474482 6.004812e-01 7.217135e-01 13 98431081 98431156 76 + 1.932 1.964 0.107
ENSG00000152767 E068 141.3633314 0.0003046342 8.832625e-01 9.293248e-01 13 98431157 98431280 124 + 2.092 2.099 0.021
ENSG00000152767 E069 2.0065527 0.1511393151 4.989603e-01 6.353417e-01 13 98431281 98434997 3717 + 0.538 0.400 -0.694
ENSG00000152767 E070 152.4980003 0.0002406705 7.649611e-01 8.478649e-01 13 98435576 98435706 131 + 2.119 2.140 0.070
ENSG00000152767 E071 10.5863640 0.0077157374 5.636588e-01 6.911093e-01 13 98435707 98436101 395 + 0.945 1.024 0.293
ENSG00000152767 E072 1.1770843 0.0110225615 4.836398e-01 6.216806e-01 13 98437766 98437858 93 + 0.392 0.271 -0.758
ENSG00000152767 E073 108.3384724 0.0003117329 7.984358e-01 8.713608e-01 13 98438804 98438872 69 + 1.972 1.993 0.070
ENSG00000152767 E074 128.2861024 0.0002809589 2.643990e-01 4.023713e-01 13 98439107 98439196 90 + 2.022 2.072 0.169
ENSG00000152767 E075 115.0176452 0.0003014800 3.035146e-01 4.454321e-01 13 98439961 98440043 83 + 1.975 2.024 0.165
ENSG00000152767 E076 118.2288997 0.0002996051 2.233447e-01 3.543806e-01 13 98440123 98440235 113 + 1.981 2.037 0.187
ENSG00000152767 E077 135.9173842 0.0031015110 1.109275e-02 3.138892e-02 13 98440670 98440836 167 + 1.992 2.115 0.410
ENSG00000152767 E078 1.2888589 0.0122268221 2.477063e-01 3.832457e-01 13 98445153 98446097 945 + 0.471 0.271 -1.174
ENSG00000152767 E079 135.5576335 0.0058930679 5.673613e-02 1.210075e-01 13 98446098 98446205 108 + 2.003 2.110 0.360
ENSG00000152767 E080 1.4444241 0.1402649594 2.687779e-01 4.072589e-01 13 98446206 98446665 460 + 0.173 0.429 1.786
ENSG00000152767 E081 190.0830121 0.0005188232 1.321760e-04 6.683663e-04 13 98446666 98446817 152 + 2.132 2.261 0.432
ENSG00000152767 E082 0.2955422 0.0294981845 5.398497e-01   13 98446818 98447844 1027 + 0.173 0.085 -1.176
ENSG00000152767 E083 285.5084307 0.0001789502 4.191443e-08 4.592310e-07 13 98448236 98448873 638 + 2.294 2.439 0.482
ENSG00000152767 E084 121.1926012 0.0008135685 1.819538e-06 1.428478e-05 13 98448874 98449010 137 + 1.880 2.081 0.677
ENSG00000152767 E085 167.0501191 0.0005542662 1.118673e-14 3.652692e-13 13 98449011 98449221 211 + 1.949 2.231 0.943
ENSG00000152767 E086 123.8649908 0.0074876462 1.887317e-10 3.175651e-09 13 98449222 98449353 132 + 1.727 2.118 1.316
ENSG00000152767 E087 151.6556726 0.0144087089 4.094754e-06 2.970245e-05 13 98449354 98449542 189 + 1.865 2.199 1.119
ENSG00000152767 E088 122.9503935 0.0240724210 1.595740e-02 4.263506e-02 13 98449543 98455176 5634 + 1.868 2.091 0.747