ENSG00000151503

1 Isoform Switch

Summary Plot

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

Results

isoform_id gene_id condition_1 condition_2 gene_name gene_biotype iso_biotype gene_overall_mean gene_value_1 gene_value_2 gene_stderr_1 gene_stderr_2 gene_log2_fold_change iso_overall_mean iso_value_1 iso_value_2 iso_stderr_1 iso_stderr_2 iso_log2_fold_change IF_overall IF1 IF2 dIF isoform_switch_q_value gene_switch_q_value PTC codingPotential
ENST00000526422 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding protein_coding 41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 2.141367 3.132404 2.32142353 0.3120812 0.48963484 -0.4306576 0.05577500 0.09240000 0.0472333333 -0.04516667 1.804802e-01 1.3608e-44   FALSE
ENST00000530396 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding nonsense_mediated_decay 41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 1.974066 3.381951 0.03356742 1.0020744 0.03356742 -6.2827218 0.05835417 0.09703333 0.0006666667 -0.09636667 1.080584e-06 1.3608e-44 TRUE TRUE
ENST00000685324 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding protein_coding 41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 12.930252 3.957421 19.61988965 2.5767278 2.02794361 2.3067786 0.28159167 0.11163333 0.3998666667 0.28823333 3.320930e-01 1.3608e-44 FALSE TRUE
ENST00000688834 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding retained_intron 41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 1.441306 3.756260 0.00000000 1.0173248 0.00000000 -8.5569889 0.03761250 0.10356667 0.0000000000 -0.10356667 2.751716e-26 1.3608e-44 FALSE TRUE
ENST00000689387 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding nonsense_mediated_decay 41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 1.823646 5.082711 0.04295707 0.5627609 0.04295707 -6.5874665 0.05473333 0.14440000 0.0008666667 -0.14353333 1.360800e-44 1.3608e-44 FALSE TRUE
ENST00000692494 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding retained_intron 41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 2.919983 1.491805 2.98753589 0.0770751 0.23544759 0.9970800 0.07617083 0.04286667 0.0610666667 0.01820000 1.442793e-01 1.3608e-44 TRUE TRUE
MSTRG.6592.15 ENSG00000151503 HEK293_OSMI2_2hA HEK293_TMG_2hB NCAPD3 protein_coding   41.82296 35.15325 48.96683 3.417502 0.5306908 0.4780309 12.144276 8.826820 16.55806679 0.7118328 1.27759405 0.9068061 0.28099167 0.25570000 0.3388000000 0.08310000 3.421687e-01 1.3608e-44 TRUE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

Counts

All exons whithin this gene region are shown and numbering below.

Expression

All exons whithin this gene region are shown and numbering below.

Splicing

All exons whithin this gene region are shown and numbering below.

Transcripts

All isoforms whithin this gene region are shown below.

Results

groupID featureID exonBaseMean dispersion pvalue padj seqnames start end width strand HEK293_TMG_2hB HEK293_OSMI2_2hA log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hB
ENSG00000151503 E001 2.1131330 0.0067463488 1.427971e-01 2.518431e-01 11 134150113 134150118 6 - 0.595 0.341 -1.301
ENSG00000151503 E002 33.6663122 0.0140864673 4.338923e-03 1.409337e-02 11 134150119 134150583 465 - 1.421 1.659 0.815
ENSG00000151503 E003 4.5832106 0.0042171201 1.831822e-02 4.782774e-02 11 134150584 134150662 79 - 0.564 0.890 1.341
ENSG00000151503 E004 7.7133019 0.0025080497 1.294763e-03 4.958537e-03 11 134150663 134150689 27 - 0.743 1.111 1.393
ENSG00000151503 E005 178.1557871 0.0139765517 1.476263e-04 7.368944e-04 11 134150690 134151867 1178 - 2.123 2.375 0.841
ENSG00000151503 E006 25.6420106 0.0081603600 8.788340e-01 9.261642e-01 11 134151868 134151925 58 - 1.437 1.425 -0.042
ENSG00000151503 E007 63.6300490 0.0014018069 6.428642e-03 1.973629e-02 11 134151926 134152433 508 - 1.754 1.880 0.426
ENSG00000151503 E008 8.3230343 0.0020170544 2.718137e-04 1.265030e-03 11 134152434 134152440 7 - 0.743 1.149 1.531
ENSG00000151503 E009 8.1089759 0.0020836786 1.510317e-04 7.516154e-04 11 134152441 134152444 4 - 0.721 1.149 1.618
ENSG00000151503 E010 10.2687652 0.0017413087 2.255711e-06 1.734677e-05 11 134152445 134152455 11 - 0.763 1.257 1.831
ENSG00000151503 E011 12.3961028 0.0031208614 8.247422e-07 6.974598e-06 11 134152456 134152461 6 - 0.853 1.335 1.750
ENSG00000151503 E012 12.5778072 0.0044938225 7.460169e-07 6.369115e-06 11 134152462 134152462 1 - 0.853 1.343 1.776
ENSG00000151503 E013 14.0742930 0.0154350802 5.625531e-06 3.958180e-05 11 134152463 134152478 16 - 0.899 1.385 1.749
ENSG00000151503 E014 13.7442954 0.0127591672 6.362012e-06 4.424611e-05 11 134152479 134152481 3 - 0.899 1.372 1.701
ENSG00000151503 E015 98.6006907 0.0071377750 1.978491e-12 4.619983e-11 11 134152482 134152577 96 - 1.785 2.172 1.298
ENSG00000151503 E016 135.0297661 0.0118665325 1.740685e-07 1.688604e-06 11 134152578 134152625 48 - 1.963 2.281 1.064
ENSG00000151503 E017 131.8723139 0.0102988822 7.652886e-07 6.520717e-06 11 134152626 134152642 17 - 1.972 2.260 0.966
ENSG00000151503 E018 565.6815021 0.0064039919 1.981833e-08 2.312895e-07 11 134152643 134153010 368 - 2.636 2.863 0.755
ENSG00000151503 E019 236.4734742 0.0014627008 1.730476e-09 2.453843e-08 11 134153011 134153052 42 - 2.291 2.464 0.577
ENSG00000151503 E020 271.8821635 0.0014201207 2.516701e-11 4.911223e-10 11 134153140 134153200 61 - 2.346 2.530 0.615
ENSG00000151503 E021 325.5981051 0.0041098289 1.677998e-04 8.257144e-04 11 134153289 134153363 75 - 2.448 2.584 0.452
ENSG00000151503 E022 42.1073110 0.0276864771 5.183385e-02 1.124251e-01 11 134153364 134153708 345 - 1.542 1.721 0.609
ENSG00000151503 E023 17.0260603 0.0407778903 3.504054e-01 4.945848e-01 11 134153709 134153795 87 - 1.195 1.312 0.413
ENSG00000151503 E024 182.1679117 0.0059087237 8.566151e-01 9.113345e-01 11 134153796 134156751 2956 - 2.262 2.262 0.000
ENSG00000151503 E025 8.7385779 0.0526736113 5.417995e-01 6.727241e-01 11 134156752 134156818 67 - 1.026 0.916 -0.411
ENSG00000151503 E026 10.1458891 0.0020625643 6.539381e-01 7.642699e-01 11 134156819 134156922 104 - 1.025 1.069 0.160
ENSG00000151503 E027 11.1991858 0.0019963306 3.346224e-01 4.783670e-01 11 134156923 134157017 95 - 1.123 1.023 -0.363
ENSG00000151503 E028 311.8213585 0.0040022407 1.771666e-03 6.509256e-03 11 134157018 134157095 78 - 2.443 2.554 0.370
ENSG00000151503 E029 6.0697663 0.0026737198 2.024251e-02 5.199136e-02 11 134157208 134157927 720 - 0.967 0.660 -1.210
ENSG00000151503 E030 412.9542404 0.0006858259 1.659282e-06 1.313332e-05 11 134157928 134158067 140 - 2.572 2.671 0.328
ENSG00000151503 E031 355.1712722 0.0002735819 8.260181e-11 1.478102e-09 11 134158329 134158495 167 - 2.492 2.619 0.423
ENSG00000151503 E032 381.9780279 0.0004516204 1.493357e-12 3.556406e-11 11 134159892 134160074 183 - 2.516 2.658 0.472
ENSG00000151503 E033 282.8563480 0.0001753912 1.529424e-07 1.498861e-06 11 134161781 134161891 111 - 2.404 2.514 0.369
ENSG00000151503 E034 416.4724383 0.0001926645 1.038101e-09 1.535007e-08 11 134167996 134168195 200 - 2.571 2.679 0.360
ENSG00000151503 E035 254.7635924 0.0002153390 1.035897e-07 1.049116e-06 11 134168469 134168528 60 - 2.352 2.470 0.396
ENSG00000151503 E036 261.0999490 0.0001691427 9.181474e-07 7.681856e-06 11 134168529 134168600 72 - 2.370 2.477 0.357
ENSG00000151503 E037 148.9537979 0.0026642995 2.175525e-02 5.516816e-02 11 134168601 134168602 2 - 2.139 2.225 0.287
ENSG00000151503 E038 335.0757414 0.0001732832 1.311410e-01 2.357409e-01 11 134168917 134169054 138 - 2.517 2.545 0.093
ENSG00000151503 E039 249.6625079 0.0001818261 2.737517e-02 6.675604e-02 11 134176307 134176383 77 - 2.424 2.371 -0.178
ENSG00000151503 E040 132.7429254 0.0039199176 9.217280e-05 4.851864e-04 11 134176384 134176386 3 - 2.197 2.018 -0.599
ENSG00000151503 E041 0.4782907 0.0217681645 3.873291e-02 8.868751e-02 11 134176387 134176432 46 - 0.000 0.340 13.378
ENSG00000151503 E042 402.1349322 0.0006013988 1.043557e-04 5.420859e-04 11 134177219 134177457 239 - 2.642 2.555 -0.289
ENSG00000151503 E043 0.2924217 0.0290785164 3.426546e-01   11 134178483 134178633 151 - 0.186 0.000 -11.921
ENSG00000151503 E044 254.1665617 0.0001694408 2.849830e-02 6.900987e-02 11 134178634 134178741 108 - 2.430 2.377 -0.176
ENSG00000151503 E045 238.0551954 0.0013182894 1.778038e-01 2.983719e-01 11 134178822 134178936 115 - 2.398 2.354 -0.144
ENSG00000151503 E046 1.0006785 0.0143961501 7.417591e-01 8.308002e-01 11 134180163 134180309 147 - 0.315 0.254 -0.424
ENSG00000151503 E047 0.7749669 0.1376745538 4.039869e-01 5.477343e-01 11 134180310 134180334 25 - 0.315 0.145 -1.423
ENSG00000151503 E048 236.3780924 0.0015524802 3.651271e-01 5.094622e-01 11 134181077 134181184 108 - 2.389 2.355 -0.113
ENSG00000151503 E049 3.2504619 0.0077753153 9.979505e-01 1.000000e+00 11 134183013 134183153 141 - 0.623 0.621 -0.009
ENSG00000151503 E050 239.5911725 0.0009361688 8.958979e-01 9.374699e-01 11 134184637 134184752 116 - 2.381 2.379 -0.006
ENSG00000151503 E051 0.1472490 0.0429339623 7.212105e-01   11 134184753 134184773 21 - 0.103 0.000 -10.921
ENSG00000151503 E052 243.8674852 0.0008073403 1.954404e-01 3.205097e-01 11 134184903 134185000 98 - 2.406 2.367 -0.130
ENSG00000151503 E053 286.3376008 0.0031817851 1.195408e-02 3.342136e-02 11 134185335 134185526 192 - 2.498 2.402 -0.321
ENSG00000151503 E054 0.5891098 0.0182986575 8.975918e-02 1.747594e-01 11 134192191 134192688 498 - 0.315 0.000 -12.921
ENSG00000151503 E055 292.5773488 0.0002225460 6.471256e-06 4.491025e-05 11 134192689 134192909 221 - 2.511 2.409 -0.339
ENSG00000151503 E056 259.1913844 0.0008868073 6.264975e-04 2.630323e-03 11 134194016 134194150 135 - 2.456 2.362 -0.315
ENSG00000151503 E057 250.5597027 0.0003339498 3.860461e-05 2.233411e-04 11 134194665 134194734 70 - 2.444 2.342 -0.341
ENSG00000151503 E058 163.7952429 0.0002433703 7.422829e-08 7.729951e-07 11 134194735 134194738 4 - 2.280 2.121 -0.533
ENSG00000151503 E059 280.9769728 0.0010362735 2.951316e-10 4.810030e-09 11 134202816 134202905 90 - 2.518 2.344 -0.581
ENSG00000151503 E060 209.1130414 0.0002278084 1.360139e-13 3.792116e-12 11 134203142 134203198 57 - 2.399 2.204 -0.654
ENSG00000151503 E061 0.3268771 0.0289020602 7.656944e-01   11 134203199 134203653 455 - 0.103 0.145 0.576
ENSG00000151503 E062 364.1961291 0.0094220502 1.249266e-03 4.807917e-03 11 134203654 134203906 253 - 2.630 2.459 -0.569
ENSG00000151503 E063 245.9018464 0.0102211905 4.991038e-04 2.156643e-03 11 134204046 134204171 126 - 2.468 2.274 -0.649
ENSG00000151503 E064 198.2533804 0.0100031795 1.463904e-04 7.315159e-04 11 134204899 134204971 73 - 2.382 2.166 -0.723
ENSG00000151503 E065 0.0000000       11 134205610 134206598 989 -      
ENSG00000151503 E066 230.5463627 0.0027724522 2.444689e-10 4.033259e-09 11 134206599 134206732 134 - 2.453 2.221 -0.772
ENSG00000151503 E067 109.0879025 0.0029847462 6.342945e-07 5.497035e-06 11 134208864 134208878 15 - 2.127 1.899 -0.765
ENSG00000151503 E068 166.1438166 0.0053564291 7.979743e-05 4.268759e-04 11 134208879 134208951 73 - 2.296 2.105 -0.638
ENSG00000151503 E069 0.4815130 0.0218279505 3.597564e-01 5.040847e-01 11 134208952 134209144 193 - 0.103 0.254 1.573
ENSG00000151503 E070 151.5253929 0.0058214976 2.088429e-05 1.289844e-04 11 134209145 134209206 62 - 2.264 2.049 -0.719
ENSG00000151503 E071 0.6266857 0.0179798372 6.921070e-01 7.933971e-01 11 134209207 134209232 26 - 0.186 0.254 0.574
ENSG00000151503 E072 205.0618457 0.0083424684 7.981559e-06 5.421788e-05 11 134209313 134209477 165 - 2.404 2.161 -0.811
ENSG00000151503 E073 0.5117906 0.2004699146 8.910165e-01 9.344026e-01 11 134209478 134209734 257 - 0.185 0.147 -0.402
ENSG00000151503 E074 0.1817044 0.0396509134 3.274056e-01   11 134210263 134210269 7 - 0.000 0.145 11.797
ENSG00000151503 E075 240.8228057 0.0099770906 8.702360e-07 7.321739e-06 11 134210270 134210454 185 - 2.485 2.207 -0.928
ENSG00000151503 E076 241.2782510 0.0078773271 1.657207e-10 2.817996e-09 11 134216936 134217098 163 - 2.501 2.175 -1.088
ENSG00000151503 E077 0.1482932 0.0407299748 3.300541e-01   11 134217099 134217944 846 - 0.000 0.145 11.792
ENSG00000151503 E078 0.0000000       11 134220391 134220491 101 -      
ENSG00000151503 E079 240.9696814 0.0099275700 9.506604e-10 1.415100e-08 11 134220572 134220726 155 - 2.504 2.162 -1.141
ENSG00000151503 E080 3.6912629 0.0058704648 6.062190e-01 7.264205e-01 11 134221426 134223092 1667 - 0.623 0.697 0.314
ENSG00000151503 E081 49.6854194 0.0288514530 2.385518e-08 2.739463e-07 11 134223093 134223482 390 - 1.378 1.916 1.831
ENSG00000151503 E082 171.5609160 0.0003572602 4.877917e-13 1.257973e-11 11 134223863 134224000 138 - 2.320 2.105 -0.718
ENSG00000151503 E083 28.6942175 0.0057752098 1.009353e-03 3.990719e-03 11 134224001 134224286 286 - 1.565 1.304 -0.902
ENSG00000151503 E084 29.2066084 0.0191600598 6.543559e-02 1.357681e-01 11 134224287 134224554 268 - 1.549 1.363 -0.640
ENSG00000151503 E085 6.2175869 0.0156035559 4.752405e-01 6.139722e-01 11 134225097 134225504 408 - 0.819 0.910 0.350