• ENSG00000136807
  • 1 Isoform Switch
  • 2 Differential Exon Usage

ENSG00000136807

1 Isoform Switch

Only the isoforms with fraction > 5% are shown below.

Notes on IDR and IDR_w_binding: As the prediction of Intrinsically Disordered Regions (IDR) and Intrinsically Disordered Binding Regions (IDBR) are done by two different tools we require two things to annotate the Intrinsically Disordered Binding Regions (IDBR). Firstly the IDBR (predicted by ANCHOR2) must be a region of at least 15 amino acids (after the smoothing). Secondly the fraction of the IDBR which overlaps the IDR predictions (done by IUPred3, again after smoothing) must be at least 80%. When that is the case the IDR type will be annotated as “IDR_w_binding_region” instead of just “IDR”. The current default parameters have not been rigorously tested and should be considered experimental.

For the function of any other domain, please Click HERE to search it through Pfam database.

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isoform_idColumn filter
gene_idColumn filter
condition_1Column filter
condition_2Column filter
gene_nameColumn filter
gene_biotypeColumn filter
iso_biotypeColumn filter
gene_overall_meanColumn filter
gene_value_1Column filter
gene_value_2Column filter
gene_stderr_1Column filter
gene_stderr_2Column filter
gene_log2_fold_changeColumn filter
iso_overall_meanColumn filter
iso_value_1Column filter
iso_value_2Column filter
iso_stderr_1Column filter
iso_stderr_2Column filter
iso_log2_fold_changeColumn filter
IF_overallColumn filter
IF1Column filter
IF2Column filter
dIFColumn filter
isoform_switch_q_valueColumn filter
gene_switch_q_valueColumn filter
PTCColumn filter
codingPotentialColumn filter
ENST00000373264 ENSG00000136807 HEK293_OSMI2_2hA HEK293_TMG_2hB CDK9 protein_coding protein_coding 38.58442 61.63308 29.92055 2.629958 0.4525763 -1.04232 20.771075 36.888786 15.1880670 1.4310889 0.0697417 -1.2796855 0.52829583 0.59906667 0.50783333 -0.091233333 0.01353581 7.993818e-08 FALSE TRUE
ENST00000480353 ENSG00000136807 HEK293_OSMI2_2hA HEK293_TMG_2hB CDK9 protein_coding processed_transcript 38.58442 61.63308 29.92055 2.629958 0.4525763 -1.04232 11.795659 16.422070 10.6455547 1.5168826 0.1296642 -0.6249085 0.31849583 0.26633333 0.35610000 0.089766667 0.06535401 7.993818e-08 FALSE FALSE
ENST00000491521 ENSG00000136807 HEK293_OSMI2_2hA HEK293_TMG_2hB CDK9 protein_coding processed_transcript 38.58442 61.63308 29.92055 2.629958 0.4525763 -1.04232 2.457693 4.224801 0.9406786 2.1127098 0.9406786 -2.1552645 0.05708750 0.06716667 0.03053333 -0.036633333 0.53863796 7.993818e-08 FALSE FALSE
ENST00000498339 ENSG00000136807 HEK293_OSMI2_2hA HEK293_TMG_2hB CDK9 protein_coding processed_transcript 38.58442 61.63308 29.92055 2.629958 0.4525763 -1.04232 2.858817 3.875742 2.0013317 0.7353419 0.4252287 -0.9500390 0.07802917 0.06383333 0.06736667 0.003533333 0.98191242 7.993818e-08 FALSE TRUE
  • Note:
    • The comparisons made can be identified as “from ‘condition_1’ to ‘condition_2’”, meaning ‘condition_1’ is considered the ground state and ‘condition_2’ the changed state. This also means that a positive dIF value indicates that the isoform usage is increased in ‘condition_2’ compared to ‘condition_1’. Since the ‘isoformFeatures’ entry is the most relevant part of the switchAnalyzeRlist object, the most-used standard methods have also been implemented to work directly on isoformFeatures.

2 Differential Exon Usage

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All exons whithin this gene region are shown and numbering below.

All isoforms whithin this gene region are shown below.

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groupIDColumn filter
featureIDColumn filter
exonBaseMeanColumn filter
dispersionColumn filter
pvalueColumn filter
padjColumn filter
seqnamesColumn filter
startColumn filter
endColumn filter
widthColumn filter
strandColumn filter
HEK293_TMG_2hBColumn filter
HEK293_OSMI2_2hAColumn filter
log2fold_HEK293_OSMI2_2hA_HEK293_TMG_2hBColumn filter
ENSG00000136807 E001 2.7615766 0.0055631451 1.729759e-05 1.088479e-04 9 127785679 127785832 154 + 0.914 0.261 -3.128
ENSG00000136807 E002 1.4123503 0.0096839767 1.593284e-04 7.888428e-04 9 127785833 127785917 85 + 0.709 0.081 -4.320
ENSG00000136807 E003 4.2369373 0.1153735608 2.678807e-06 2.027535e-05 9 127785918 127786033 116 + 1.126 0.213 -4.292
ENSG00000136807 E004 41.4132668 0.0260217667 3.100186e-02 7.391868e-02 9 127786034 127786073 40 + 1.698 1.503 -0.662
ENSG00000136807 E005 239.4577748 0.0008780112 1.363104e-02 3.738053e-02 9 127786074 127786240 167 + 2.359 2.299 -0.200
ENSG00000136807 E006 289.9418553 0.0002110961 6.323937e-04 2.652374e-03 9 127786701 127786782 82 + 2.448 2.378 -0.230
ENSG00000136807 E007 0.5911836 0.0274507811 3.506290e-01 4.948125e-01 9 127787500 127787517 18 + 0.000 0.209 9.128
ENSG00000136807 E008 348.5689825 0.0004136979 2.224422e-02 5.618147e-02 9 127787518 127787608 91 + 2.507 2.466 -0.137
ENSG00000136807 E009 449.7912876 0.0003371171 9.449501e-01 9.694557e-01 9 127787947 127788113 167 + 2.582 2.589 0.026
ENSG00000136807 E010 435.7943548 0.0002096559 9.440607e-02 1.819962e-01 9 127788214 127788385 172 + 2.542 2.584 0.137
ENSG00000136807 E011 23.6818695 0.0021705017 1.509667e-01 2.629709e-01 9 127788386 127788412 27 + 1.229 1.359 0.454
ENSG00000136807 E012 34.3235612 0.0006840736 8.702628e-01 9.205462e-01 9 127788422 127788543 122 + 1.489 1.486 -0.009
ENSG00000136807 E013 390.0088466 0.0002864435 4.412559e-01 5.828911e-01 9 127788544 127788692 149 + 2.510 2.535 0.082
ENSG00000136807 E014 1339.8037035 0.0015049052 4.666922e-03 1.500307e-02 9 127789178 127790792 1615 + 3.023 3.077 0.177